Experiment set1S112 for Escherichia coli ECOR27

Compare to:

Bas69

200 most important genes:

  gene name fitness t score description  
NOLOHH_00240 -4.6 -3.1 Entry exclusion protein compare
NOLOHH_06715 wecA -4.3 -9.6 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
NOLOHH_12625 emrR -3.9 -2.7 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
NOLOHH_21640 gfcB -3.9 -2.7 Uncharacterized lipoprotein GfcB compare
NOLOHH_06220 typA -3.9 -2.7 ribosome-dependent GTPase TypA compare
NOLOHH_07610 envC -3.9 -8.2 murein hydrolase activator EnvC compare
NOLOHH_08175 pdeH -3.8 -8.9 cyclic-guanylate-specific phosphodiesterase compare
NOLOHH_12635 ygaZ -3.7 -3.6 L-valine exporter subunit YgaZ compare
NOLOHH_07565 rfaL -3.6 -3.4 O-antigen ligase RfaL compare
NOLOHH_06405 tatC -3.5 -7.1 Sec-independent protein translocase subunit TatC compare
NOLOHH_06685 rffC -3.3 -7.0 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
NOLOHH_03145 rapA -3.3 -11.7 RNA polymerase-associated protein RapA compare
NOLOHH_07560 rfaB -3.3 -3.2 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
NOLOHH_09845 greA -3.3 -1.4 transcription elongation factor GreA compare
NOLOHH_21665 etk -3.3 -3.9 tyrosine-protein kinase compare
NOLOHH_20195 yciZ -3.2 -2.1 UPF0509 protein YciZ compare
NOLOHH_00385 -3.2 -2.0 hypothetical protein compare
NOLOHH_06695 rffG -3.2 -6.7 dTDP-glucose 4,6-dehydratase compare
NOLOHH_00560 -3.2 -1.3 phage portal protein compare
NOLOHH_21645 gfcC -3.2 -3.7 Uncharacterized protein GfcC compare
NOLOHH_20895 nudJ -3.1 -1.3 phosphatase NudJ compare
NOLOHH_20225 lapA -3.1 -1.3 lipopolysaccharide assembly protein LapA compare
NOLOHH_17630 btuD -3.0 -2.0 vitamin B12 ABC transporter ATP-binding protein BtuD compare
NOLOHH_17175 yeaQ -3.0 -2.0 UPF0410 protein YeaQ compare
NOLOHH_16400 fliA -3.0 -2.1 RNA polymerase sigma factor FliA compare
NOLOHH_15215 yehW -2.9 -2.0 glycine betaine ABC transporter permease YehW compare
NOLOHH_15960 pduM -2.9 -2.0 microcompartment protein PduM compare
NOLOHH_21325 mdoH -2.9 -4.4 glucans biosynthesis glucosyltransferase MdoH compare
NOLOHH_00565 -2.9 -1.2 Lambda prophage-derived head-to-tail joining protein W compare
NOLOHH_06690 rfbA -2.9 -6.9 glucose-1-phosphate thymidylyltransferase RfbA compare
NOLOHH_07555 rfaJ -2.9 -2.7 glucosyltransferase compare
NOLOHH_15730 -2.9 -4.7 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
NOLOHH_06665 wzyE -2.8 -2.0 ECA oligosaccharide polymerase compare
NOLOHH_09905 nusA -2.8 -1.9 Transcription termination/antitermination protein NusA compare
NOLOHH_10690 ftsP -2.8 -5.0 cell division protein FtsP compare
NOLOHH_11145 gshB -2.8 -2.7 glutathione synthase compare
NOLOHH_09835 obgE -2.8 -1.2 GTPase ObgE compare
NOLOHH_21655 gfcE -2.8 -4.6 Putative polysaccharide export protein GfcE compare
NOLOHH_23730 rsfS -2.8 -2.7 ribosome silencing factor compare
NOLOHH_03020 rsmH -2.8 -1.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
NOLOHH_00940 -2.8 -1.2 RHS repeat protein compare
NOLOHH_23860 rnk -2.8 -1.6 nucleoside diphosphate kinase regulator compare
NOLOHH_16345 fliF -2.8 -3.7 flagellar M-ring protein FliF compare
NOLOHH_03025 mraZ -2.8 -2.5 division/cell wall cluster transcriptional repressor MraZ compare
NOLOHH_03300 fkpB -2.7 -1.1 FKBP-type peptidyl-prolyl cis-trans isomerase compare
NOLOHH_12805 rnfH -2.7 -1.8 RnfH family protein compare
NOLOHH_09630 sspA -2.7 -2.6 stringent starvation protein A compare
NOLOHH_21180 flgG -2.7 -2.5 flagellar basal-body rod protein FlgG compare
NOLOHH_09470 dusB -2.7 -6.1 tRNA dihydrouridine synthase DusB compare
NOLOHH_18650 ydeJ -2.7 -1.8 2-oxo-tetronate isomerase compare
NOLOHH_14310 -2.6 -3.5 Protein DedA compare
NOLOHH_19625 -2.6 -1.7 phage tail protein compare
NOLOHH_14160 Arg_trna -2.6 -1.8 tRNA-Arg(cct) compare
NOLOHH_11415 pepP -2.6 -4.2 Xaa-Pro aminopeptidase compare
NOLOHH_14200 sixA -2.6 -1.7 phosphohistidine phosphatase SixA compare
NOLOHH_19875 dbpA -2.6 -1.8 ATP-dependent RNA helicase DbpA compare
NOLOHH_18660 dgcZ -2.6 -1.5 diguanylate cyclase DgcZ compare
NOLOHH_06915 mioC -2.6 -4.8 FMN-binding protein MioC compare
NOLOHH_22400 ybjG -2.6 -2.4 undecaprenyl-diphosphate phosphatase compare
NOLOHH_15975 pduJ -2.5 -1.7 propanediol utilization microcompartment protein PduJ compare
NOLOHH_16605 flhB -2.5 -2.4 flagellar biosynthesis protein FlhB compare
NOLOHH_05815 metL -2.5 -10.4 bifunctional aspartate kinase/homoserine dehydrogenase II compare
NOLOHH_20250 ymiC -2.5 -1.4 Protein YmiC compare
NOLOHH_16340 fliG -2.5 -1.7 flagellar motor switch protein FliG compare
NOLOHH_06700 wecC -2.5 -9.3 UDP-N-acetyl-D-mannosamine dehydrogenase conserved
NOLOHH_14475 nuoE -2.5 -1.6 NADH-quinone oxidoreductase subunit NuoE compare
NOLOHH_16315 fliL -2.5 -1.6 flagellar basal body-associated protein FliL compare
NOLOHH_10655 qseC -2.4 -5.5 two-component system sensor histidine kinase QseC compare
NOLOHH_08340 gorA -2.4 -5.5 glutathione-disulfide reductase compare
NOLOHH_17565 yniD -2.4 -1.0 Uncharacterized protein YniD compare
NOLOHH_21650 gfcD -2.4 -7.7 Uncharacterized lipoprotein GfcD compare
NOLOHH_02315 rnhA -2.4 -3.1 ribonuclease HI compare
NOLOHH_06675 wzxE -2.4 -1.6 lipid III flippase WzxE compare
NOLOHH_09610 zapG -2.4 -3.2 Z-ring associated protein ZapG compare
NOLOHH_21660 etp -2.4 -4.0 protein-tyrosine-phosphatase Etp compare
NOLOHH_21185 flgF -2.4 -1.2 flagellar basal-body rod protein FlgF compare
NOLOHH_11175 speA -2.4 -7.3 biosynthetic arginine decarboxylase compare
NOLOHH_06415 tatA -2.4 -1.4 Sec-independent protein translocase subunit TatA compare
NOLOHH_22050 serC -2.4 -3.8 3-phosphoserine/phosphohydroxythreonine transaminase compare
NOLOHH_07310 tisB -2.3 -2.0 Small toxic protein TisB compare
NOLOHH_21195 flgD -2.3 -2.2 flagellar hook assembly protein FlgD compare
NOLOHH_21175 flgH -2.3 -1.6 flagellar basal body L-ring protein FlgH compare
NOLOHH_17415 xthA -2.3 -1.5 exodeoxyribonuclease III compare
NOLOHH_19420 ydbD -2.3 -1.5 Uncharacterized protein YdbD compare
NOLOHH_23315 sucA -2.3 -1.5 2-oxoglutarate dehydrogenase E1 component compare
NOLOHH_21190 flgE -2.3 -2.2 flagellar hook protein FlgE compare
NOLOHH_06680 rffA -2.2 -9.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
NOLOHH_13185 glyA -2.2 -1.5 serine hydroxymethyltransferase compare
NOLOHH_14490 nuoH -2.2 -2.9 NADH-quinone oxidoreductase subunit NuoH compare
NOLOHH_07530 rfaQ -2.2 -6.5 lipopolysaccharide core heptosyltransferase RfaQ compare
NOLOHH_06670 rffT -2.2 -7.5 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
NOLOHH_20775 ycgN -2.2 -1.4 YcgN family cysteine cluster protein compare
NOLOHH_02690 dksA -2.2 -1.5 RNA polymerase-binding protein DksA compare
NOLOHH_06850 yieP -2.2 -8.6 Uncharacterized HTH-type transcriptional regulator YieP compare
NOLOHH_21035 nagZ -2.2 -3.1 beta-N-acetylhexosaminidase compare
NOLOHH_20500 narI -2.2 -1.4 respiratory nitrate reductase subunit gamma compare
NOLOHH_03340 -2.2 -0.9 fimbrial family protein compare
NOLOHH_06410 tatB -2.2 -4.5 Sec-independent protein translocase protein TatB compare
NOLOHH_16330 fliI -2.2 -1.5 flagellum-specific ATP synthase FliI compare
NOLOHH_21170 flgI -2.2 -1.4 flagellar basal body P-ring protein FlgI compare
NOLOHH_24200 lomR -2.2 -1.7 Ail/Lom family protein compare
NOLOHH_17725 uhpC -2.2 -0.9 MFS transporter compare
NOLOHH_07585 yibB -2.1 -5.6 protein YibB compare
NOLOHH_19740 tolA -2.1 -1.3 cell envelope integrity protein TolA compare
NOLOHH_19095 narW -2.1 -1.4 nitrate reductase molybdenum cofactor assembly chaperone compare
NOLOHH_20295 rluB -2.1 -2.7 23S rRNA pseudouridine(2605) synthase RluB compare
NOLOHH_23145 galE -2.1 -1.4 UDP-glucose 4-epimerase GalE compare
NOLOHH_08510 ftsE -2.1 -1.4 cell division ATP-binding protein FtsE compare
NOLOHH_19325 opgD -2.1 -2.0 glucan biosynthesis protein OpgD compare
NOLOHH_16665 cmoB -2.1 -1.4 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB compare
NOLOHH_17115 fadD -2.1 -1.4 long-chain-fatty-acid--CoA ligase FadD compare
NOLOHH_20455 hns -2.1 -1.4 DNA-binding transcriptional regulator H-NS compare
NOLOHH_03505 ettA -2.1 -7.7 energy-dependent translational throttle protein EttA compare
NOLOHH_09780 mlaE -2.1 -6.6 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
NOLOHH_17755 menI -2.1 -1.2 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
NOLOHH_16545 flhC -2.1 -1.4 flagellar transcriptional regulator FlhC compare
NOLOHH_20915 phoP -2.1 -1.4 two-component system response regulator PhoP compare
NOLOHH_19385 ydcF -2.1 -1.2 Protein YdcF compare
NOLOHH_16610 flhA -2.0 -2.0 flagellar biosynthesis protein FlhA compare
NOLOHH_07630 secB -2.0 -1.2 protein-export chaperone SecB compare
NOLOHH_20820 ymgG -2.0 -0.8 UPF0757 protein YmgG compare
NOLOHH_18070 rsxB -2.0 -1.3 electron transport complex subunit RsxB compare
NOLOHH_08720 glpD -2.0 -2.0 glycerol-3-phosphate dehydrogenase compare
NOLOHH_01380 pgpA -2.0 -1.3 phosphatidylglycerophosphatase A compare
NOLOHH_20465 rssB -2.0 -1.3 two-component system response regulator RssB compare
NOLOHH_21330 mdoG -2.0 -3.0 glucans biosynthesis protein MdoG compare
NOLOHH_21205 flgB -2.0 -0.8 flagellar basal body rod protein FlgB compare
NOLOHH_02670 mrcB -2.0 -11.6 bifunctional glycosyl transferase/transpeptidase compare
NOLOHH_06385 fre -2.0 -5.8 NAD(P)H-flavin reductase compare
NOLOHH_02180 yncI -2.0 -1.2 ISAs1 family transposase compare
NOLOHH_02620 yadS -2.0 -2.8 UPF0126 inner membrane protein YadS compare
NOLOHH_02510 skp -2.0 -1.0 molecular chaperone Skp compare
NOLOHH_14910 yejM -2.0 -2.2 LPS biosynthesis-modulating metalloenzyme YejM compare
NOLOHH_13115 shoB -2.0 -1.1 Small toxic protein ShoB compare
NOLOHH_18120 uidR -2.0 -1.3 DNA-binding transcriptional regulator UidR compare
NOLOHH_21585 torD -2.0 -1.8 molecular chaperone TorD compare
NOLOHH_11185 speB -1.9 -3.8 agmatinase compare
NOLOHH_18240 ynfL -1.9 -1.1 Uncharacterized HTH-type transcriptional regulator YnfL compare
NOLOHH_01255 lon_P403L -1.9 -3.8 Lon protease compare
NOLOHH_07540 rfaP -1.9 -1.8 lipopolysaccharide core heptose(I) kinase RfaP compare
NOLOHH_12055 sdaB -1.9 -7.1 L-serine ammonia-lyase II compare
NOLOHH_07535 rfaG -1.9 -1.8 Lipopolysaccharide core biosynthesis protein RfaG compare
NOLOHH_12545 recA -1.9 -1.3 recombinase RecA compare
NOLOHH_22440 pdeI -1.9 -1.6 putative cyclic di-GMP phosphodiesterase PdeI compare
NOLOHH_22635 ybiA -1.9 -2.6 N-glycosidase YbiA compare
NOLOHH_07300 emrD -1.9 -7.4 multidrug efflux MFS transporter EmrD compare
NOLOHH_16320 fliK -1.9 -2.7 flagellar hook length control protein FliK compare
NOLOHH_13035 srmB -1.9 -3.7 ATP-dependent RNA helicase SrmB compare
NOLOHH_07640 cysE -1.9 -1.1 serine O-acetyltransferase compare
NOLOHH_23480 pgm -1.9 -1.3 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
NOLOHH_02630 yadW -1.9 -1.1 Protein YadW compare
NOLOHH_11125 yggS -1.9 -5.8 pyridoxal phosphate homeostasis protein compare
NOLOHH_23250 tolR -1.9 -1.8 colicin uptake protein TolR compare
NOLOHH_13365 rodZ -1.8 -3.2 cytoskeleton protein RodZ compare
NOLOHH_24755 -1.8 -1.1 toxin ArtA compare
NOLOHH_03375 dnaJ -1.8 -1.2 molecular chaperone DnaJ compare
NOLOHH_02125 dinJ -1.8 -2.4 type II toxin-antitoxin system antitoxin DinJ compare
NOLOHH_09925 truB -1.8 -6.7 tRNA pseudouridine(55) synthase TruB compare
NOLOHH_21145 rluC -1.8 -4.5 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
NOLOHH_19435 paaX -1.8 -0.9 phenylacetic acid degradation operon negative regulatory protein PaaX compare
NOLOHH_15735 galF -1.8 -3.0 UTP--glucose-1-phosphate uridylyltransferase GalF compare
NOLOHH_13565 bcp -1.8 -2.0 thioredoxin-dependent thiol peroxidase compare
NOLOHH_18720 marA -1.8 -1.6 MDR efflux pump AcrAB transcriptional activator MarA compare
NOLOHH_15210 yehX -1.8 -3.7 glycine betaine ABC transporter ATP binding protein YehX compare
NOLOHH_19010 gntT -1.8 -1.3 transporter compare
NOLOHH_00285 -1.8 -1.8 cag pathogenicity island Cag12 family protein compare
NOLOHH_16370 yedD -1.8 -1.8 lipoprotein compare
NOLOHH_17190 yoaF -1.8 -0.7 DUF333 domain-containing protein compare
NOLOHH_21200 flgC -1.8 -1.1 flagellar basal body rod protein FlgC compare
NOLOHH_09790 mlaC -1.7 -8.6 phospholipid-binding protein MlaC compare
NOLOHH_17440 astE -1.7 -1.6 succinylglutamate desuccinylase compare
NOLOHH_16305 fliN -1.7 -1.0 flagellar motor switch protein FliN compare
NOLOHH_15350 rcnR -1.7 -1.1 Ni(II)/Co(II)-binding transcriptional repressor RcnR compare
NOLOHH_16310 fliM -1.7 -1.1 flagellar motor switch protein FliM compare
NOLOHH_23245 tolA -1.7 -2.0 cell envelope integrity protein TolA compare
NOLOHH_05175 alr -1.7 -5.1 alanine racemase compare
NOLOHH_16845 zwf -1.7 -1.3 glucose-6-phosphate dehydrogenase compare
NOLOHH_16335 fliH -1.7 -1.1 flagellar assembly protein FliH compare
NOLOHH_07305 ysdE -1.7 -4.9 Protein YsdE compare
NOLOHH_09355 aroE -1.7 -2.9 shikimate dehydrogenase compare
NOLOHH_20065 ycjN -1.7 -2.6 Putative ABC transporter periplasmic-binding protein YcjN compare
NOLOHH_18185 ydgI -1.7 -2.1 Putative arginine/ornithine antiporter compare
NOLOHH_20920 phoQ -1.7 -1.1 two-component system sensor histidine kinase PhoQ compare
NOLOHH_05880 hslV -1.7 -1.0 ATP-dependent protease subunit HslV compare
NOLOHH_11790 yqeH -1.7 -2.0 Uncharacterized protein YqeH compare
NOLOHH_14955 yejE -1.7 -2.8 Inner membrane ABC transporter permease protein YejE compare
NOLOHH_04095 -1.7 -1.9 DNA-binding protein compare
NOLOHH_21095 fabF -1.7 -1.1 beta-ketoacyl-ACP synthase II compare
NOLOHH_21890 ssuE -1.7 -1.0 NADPH-dependent FMN reductase compare
NOLOHH_05225 dgkA -1.7 -1.1 diacylglycerol kinase compare
NOLOHH_20080 pspD -1.6 -1.3 phage shock protein PspD compare
NOLOHH_12375 -1.6 -3.3 hypothetical protein compare
NOLOHH_06660 rffM -1.6 -5.8 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
NOLOHH_06520 -1.6 -1.4 DUF3289 domain-containing protein compare
NOLOHH_23310 odhB -1.6 -1.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
NOLOHH_21845 zapC -1.6 -1.1 cell division protein ZapC compare
NOLOHH_06310 yihD -1.6 -2.4 Protein YihD compare
NOLOHH_23780 tatE -1.6 -3.3 deaminated glutathione amidase compare
NOLOHH_11690 -1.6 -0.9 flhB HrpN YscU SpaS family protein compare
NOLOHH_16295 fliP -1.6 -1.1 flagellar type III secretion system pore protein FliP compare


Specific Phenotypes

For 8 genes in this experiment

For phage MOI 10 in Escherichia coli ECOR27

For phage MOI 10 across organisms