| | gene | name | fitness | t score | description | |
|---|
| b2476 | purC | -7.0 | -4.8 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b1261 | trpB | -6.6 | -4.5 | tryptophan synthase subunit beta (NCBI) | compare |
| b1260 | trpA | -6.4 | -6.2 | tryptophan synthase subunit alpha (NCBI) | compare |
| b0523 | purE | -5.8 | -4.0 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b4245 | pyrB | -5.7 | -10.2 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b2312 | purF | -5.6 | -6.6 | amidophosphoribosyltransferase (NCBI) | compare |
| b4006 | purH | -5.3 | -9.6 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b0033 | carB | -5.2 | -13.6 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2499 | purM | -5.1 | -5.0 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b1062 | pyrC | -5.1 | -7.7 | dihydroorotase (NCBI) | compare |
| b0032 | carA | -5.0 | -8.3 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b0907 | serC | -4.9 | -8.8 | phosphoserine aminotransferase (NCBI) | compare |
| b0945 | pyrD | -4.8 | -11.6 | dihydroorotate dehydrogenase (NCBI) | compare |
| b4005 | purD | -4.8 | -8.0 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b1281 | pyrF | -4.8 | -4.6 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b0522 | purK | -4.5 | -9.1 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3642 | pyrE | -4.5 | -4.4 | orotate phosphoribosyltransferase (NCBI) | compare |
| b2557 | purL | -4.3 | -10.4 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b2320 | pdxB | -4.3 | -10.0 | erythronate-4-phosphate dehydrogenase (NCBI) | compare |
| b1263 | trpD | -4.3 | -4.1 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b0052 | pdxA | -4.2 | -10.2 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| b2500 | purN | -4.2 | -5.2 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b2564 | pdxJ | -4.2 | -4.9 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b0142 | folK | -4.0 | -2.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1262 | trpC | -3.7 | -8.2 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b0145 | dksA | -3.5 | -4.8 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0437 | clpP | -3.4 | -9.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1291 | sapD | -3.3 | -3.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2501 | ppk | -3.3 | -12.4 | polyphosphate kinase (NCBI) | compare |
| b3463 | ftsE | -3.2 | -4.4 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2329 | aroC | -3.2 | -7.3 | chorismate synthase (NCBI) | compare |
| b3082 | ygjM | -3.1 | -4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3389 | aroB | -3.0 | -12.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b1264 | trpE | -3.0 | -7.0 | anthranilate synthase component I (NCBI) | compare |
| b0049 | apaH | -2.9 | -6.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b3281 | aroE | -2.8 | -16.3 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3613 | yibP | -2.7 | -5.7 | putative membrane protein (VIMSS) | compare |
| b2188 | yejM | -2.6 | -9.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0908 | aroA | -2.6 | -10.8 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3405 | ompR | -2.5 | -5.6 | osmolarity response regulator (NCBI) | compare |
| b3870 | glnA | -2.5 | -2.4 | glutamine synthetase (NCBI) | compare |
| b4451 | ryhB | -2.5 | -2.4 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b0738 | tolR | -2.5 | -4.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4177 | purA | -2.4 | -1.7 | adenylosuccinate synthetase (NCBI) | compare |
| b4246 | pyrL | -2.4 | -1.4 | pyrBI operon leader peptide (NCBI) | compare |
| b0737 | tolQ | -2.3 | -4.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1545 | pinQ | -2.3 | -2.5 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3390 | aroK | -2.3 | -3.4 | shikimate kinase I (NCBI) | compare |
| b0740 | tolB | -2.2 | -6.1 | translocation protein TolB precursor (NCBI) | compare |
| b0118 | acnB | -2.2 | -3.9 | aconitate hydratase (NCBI) | compare |
| b2830 | nudH | -2.2 | -2.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0750 | nadA | -2.1 | -5.0 | quinolinate synthetase (NCBI) | compare |
| b2318 | truA | -2.1 | -5.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1130 | phoP | -2.1 | -7.2 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1693 | aroD | -2.1 | -7.1 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1677 | lpp | -2.1 | -3.8 | murein lipoprotein (NCBI) | compare |
| b4388 | serB | -2.1 | -7.0 | 3-phosphoserine phosphatase (NCBI) | compare |
| b3725 | pstB | -2.0 | -2.4 | phosphate transporter subunit (NCBI) | compare |
| b3811 | xerC | -2.0 | -3.3 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4172 | hfq | -2.0 | -1.9 | RNA-binding protein Hfq (NCBI) | compare |
| b1129 | phoQ | -2.0 | -8.2 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0134 | panB | -2.0 | -7.7 | 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) | compare |
| b3462 | ftsX | -2.0 | -6.2 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0438 | clpX | -2.0 | -8.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0114 | aceE | -1.9 | -3.4 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0890 | ftsK | -1.9 | -7.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0741 | pal | -1.9 | -4.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2313 | cvpA | -1.8 | -2.7 | membrane protein required for colicin V production (NCBI) | compare |
| b0109 | nadC | -1.8 | -6.5 | nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| b3728 | pstS | -1.8 | -5.4 | phosphate transporter subunit (NCBI) | compare |
| b2820 | recB | -1.8 | -2.4 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3250 | mreC | -1.8 | -2.6 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b0739 | tolA | -1.8 | -4.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3121 | yhaC | -1.7 | -2.3 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.7 | -7.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3764 | yifE | -1.7 | -5.4 | hypothetical protein (NCBI) | compare |
| b3459 | yhhK | -1.7 | -6.0 | hypothetical protein (NCBI) | compare |
| b0775 | bioB | -1.6 | -4.9 | biotin synthase (NCBI) | compare |
| b2567 | rnc | -1.6 | -1.8 | ribonuclease III (NCBI) | compare |
| b0133 | panC | -1.6 | -6.6 | pantoate--beta-alanine ligase (NCBI) | compare |
| b1480 | sra | -1.6 | -2.9 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b4443 | gcvB | -1.6 | -2.1 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b2913 | serA | -1.6 | -7.5 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b0630 | lipB | -1.5 | -2.2 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1292 | sapC | -1.5 | -2.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1138 | ymfE | -1.5 | -2.2 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1850 | eda | -1.5 | -2.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b3794 | rffM | -1.5 | -6.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0167 | glnD | -1.4 | -4.4 | PII uridylyl-transferase (NCBI) | compare |
| b2297 | pta | -1.4 | -2.3 | phosphate acetyltransferase (NCBI) | compare |
| b4481 | rffT | -1.4 | -6.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3619 | rfaD | -1.4 | -4.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1290 | sapF | -1.4 | -2.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4704 | arrS | -1.4 | -1.3 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b3868 | glnG | -1.4 | -5.4 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0149 | mrcB | -1.4 | -9.5 | penicillin-binding protein 1b (NCBI) | compare |
| b2894 | xerD | -1.4 | -1.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4480 | hdfR | -1.4 | -5.3 | transcriptional regulator HdfR (NCBI) | compare |
| b2055 | wcaE | -1.4 | -2.7 | predicted glycosyl transferase (NCBI) | compare |
| b2330 | yfcB | -1.4 | -2.7 | putative adenine-specific methylase (VIMSS) | compare |
| b1273 | yciN | -1.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b3962 | udhA | -1.4 | -7.1 | putative oxidoreductase (VIMSS) | compare |
| b1861 | ruvA | -1.4 | -2.8 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2215 | ompC | -1.4 | -8.3 | outer membrane porin protein C (NCBI) | compare |
| b0425 | panE | -1.3 | -6.5 | 2-dehydropantoate 2-reductase (NCBI) | compare |
| b3839 | tatC | -1.3 | -6.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4171 | miaA | -1.3 | -5.1 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3916 | pfkA | -1.3 | -3.4 | 6-phosphofructokinase (NCBI) | compare |
| b0603 | ybdO | -1.3 | -2.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2518 | ndk | -1.3 | -2.7 | nucleoside diphosphate kinase (NCBI) | compare |
| b4155 | yjeA | -1.3 | -1.4 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1111 | ycfQ | -1.3 | -3.3 | orf, hypothetical protein (VIMSS) | compare |
| b2064 | asmA | -1.3 | -6.1 | predicted assembly protein (NCBI) | compare |
| b2574 | nadB | -1.3 | -6.8 | L-aspartate oxidase (NCBI) | compare |
| b1192 | ldcA | -1.3 | -4.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b3787 | rffD | -1.3 | -7.9 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3204 | ptsN | -1.3 | -4.7 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3790 | rffC | -1.2 | -4.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0500 | ybbD | -1.2 | -2.3 | hypothetical protein (RefSeq) | compare |
| b4178 | yjeB | -1.2 | -4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2620 | smpB | -1.2 | -1.6 | SsrA-binding protein (NCBI) | compare |
| b0778 | bioD | -1.2 | -3.6 | dethiobiotin synthetase (NCBI) | compare |
| b0957 | ompA | -1.2 | -4.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1286 | rnb | -1.2 | -3.2 | exoribonuclease II (NCBI) | compare |
| b2569 | lepA | -1.2 | -4.0 | GTP-binding protein LepA (NCBI) | compare |
| b3791 | rffA | -1.2 | -6.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4025 | pgi | -1.2 | -6.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3706 | trmE | -1.2 | -4.9 | tRNA modification GTPase (NCBI) | compare |
| b1863 | ruvC | -1.2 | -3.3 | Holliday junction resolvase (NCBI) | compare |
| b3784 | rfe | -1.2 | -8.5 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b4538 | yoeF | -1.2 | -2.1 | hypothetical protein (RefSeq) | compare |
| b3199 | yrbK | -1.1 | -1.5 | hypothetical protein (NCBI) | compare |
| b3035 | tolC | -1.1 | -5.7 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3935 | priA | -1.1 | -1.9 | primosome assembly protein PriA (NCBI) | compare |
| b1257 | yciE | -1.1 | -3.0 | hypothetical protein (NCBI) | compare |
| b0131 | panD | -1.1 | -3.4 | aspartate 1-decarboxylase precursor (NCBI) | compare |
| b0018 | mokC | -1.1 | -1.5 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3412 | bioH | -1.1 | -5.3 | carboxylesterase of pimeloyl-CoA synthesis (NCBI) | compare |
| b0774 | bioA | -1.1 | -3.4 | adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) | compare |
| b3164 | pnp | -1.1 | -2.9 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4497 | yeeL | -1.1 | -3.6 | no description | compare |
| b3786 | rffE | -1.0 | -7.5 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b2822 | recC | -1.0 | -4.0 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0053 | surA | -1.0 | -4.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1175 | minD | -1.0 | -4.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b4146 | yjeK | -1.0 | -2.6 | predicted lysine aminomutase (NCBI) | compare |
| b0121 | speE | -1.0 | -4.3 | spermidine synthase (NCBI) | compare |
| b0623 | cspE | -1.0 | -2.2 | cold shock protein E (NCBI) | compare |
| b4651 | yibW | -1.0 | -1.6 | no description | compare |
| b1865 | nudB | -0.9 | -1.6 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2904 | gcvH | -0.9 | -2.1 | glycine cleavage system protein H (NCBI) | compare |
| b1176 | minC | -0.9 | -3.2 | septum formation inhibitor (NCBI) | compare |
| b4375 | prfC | -0.9 | -4.8 | peptide chain release factor 3 (NCBI) | compare |
| b0889 | lrp | -0.9 | -2.5 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1514 | lsrC | -0.9 | -1.8 | AI2 transporter (NCBI) | compare |
| b3620 | rfaF | -0.9 | -3.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0777 | bioC | -0.9 | -3.8 | predicted methltransferase, enzyme of biotin synthesis (NCBI) | compare |
| b4179 | vacB | -0.9 | -5.1 | putative enzyme (VIMSS) | compare |
| b2762 | cysH | -0.9 | -4.1 | phosphoadenosine phosphosulfate reductase (NCBI) | compare |
| b3021 | ygiT | -0.9 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0658 | ybeX | -0.9 | -5.1 | predicteed ion transport (NCBI) | compare |
| b0866 | ybjQ | -0.9 | -1.2 | hypothetical protein (NCBI) | compare |
| b1307 | pspD | -0.9 | -1.9 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b0776 | bioF | -0.9 | -3.8 | 8-amino-7-oxononanoate synthase (NCBI) | compare |
| b3386 | rpe | -0.9 | -1.5 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3609 | secB | -0.9 | -3.3 | export protein SecB (NCBI) | compare |
| b3404 | envZ | -0.9 | -5.1 | osmolarity sensor protein (NCBI) | compare |
| b0088 | murD | -0.9 | -1.5 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2935 | tktA | -0.9 | -2.3 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3026 | qseC | -0.9 | -3.4 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3792 | wzxE | -0.9 | -4.8 | O-antigen translocase (NCBI) | compare |
| b3727 | pstC | -0.8 | -3.6 | phosphate transporter subunit (NCBI) | compare |
| b0439 | lon | -0.8 | -3.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4242 | mgtA | -0.8 | -6.6 | magnesium transporter (NCBI) | compare |
| b4410 | ecnA | -0.8 | -1.1 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b2017 | yefM | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1942 | fliJ | -0.8 | -0.9 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1704 | aroH | -0.8 | -3.4 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible (NCBI) | conserved |
| b3442 | yhhZ | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b1576 | ydfD | -0.8 | -1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b4214 | cysQ | -0.8 | -5.8 | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | compare |
| b3237 | argR | -0.8 | -2.9 | arginine repressor (NCBI) | compare |
| b1426 | ydcH | -0.8 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3940 | metL | -0.8 | -5.1 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2144 | sanA | -0.8 | -6.4 | hypothetical protein (NCBI) | compare |
| b3183 | obgE | -0.8 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0627 | tatE | -0.8 | -1.3 | twin arginine translocase protein E (NCBI) | compare |
| b0450 | glnK | -0.8 | -1.4 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b3290 | trkA | -0.8 | -2.2 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3238 | yhcN | -0.8 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2424 | cysU | -0.8 | -1.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b0767 | ybhE | -0.8 | -2.6 | 6-phosphogluconolactonase (NCBI) | compare |
| b3726 | pstA | -0.8 | -3.3 | phosphate transporter subunit (NCBI) | compare |
| b0113 | pdhR | -0.8 | -3.1 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1685 | ydiH | -0.8 | -1.4 | predicted protein (RefSeq) | compare |
| b3650 | spoT | -0.8 | -4.1 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b2905 | gcvT | -0.8 | -3.9 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b4279 | yjhB | -0.7 | -2.4 | putative transport protein (VIMSS) | compare |
| b4436 | ryeC | -0.7 | -1.2 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b3398 | yrfF | -0.7 | -2.2 | predicted inner membrane protein (NCBI) | compare |