Experiment set1IT092 for Pseudomonas sp. RS175

Compare to:

Guanosine carbon 10 mM

200 most important genes:

  gene name fitness t score description  
PFR28_03653 -6.9 -4.5 Molybdopterin-synthase adenylyltransferase compare
PFR28_02733 -6.2 -7.4 Ribokinase compare
PFR28_03860 -6.1 -4.2 putative murein peptide carboxypeptidase compare
PFR28_02821 -5.8 -16.4 3-isopropylmalate dehydrogenase compare
PFR28_03697 -5.7 -13.8 Ketol-acid reductoisomerase (NADP(+)) compare
PFR28_00695 -5.4 -3.7 Sulfur carrier protein TusA compare
PFR28_04933 -5.3 -4.8 Imidazole glycerol phosphate synthase subunit HisF compare
PFR28_04986 -5.2 -6.2 Phosphoribosyl-AMP cyclohydrolase compare
PFR28_04932 -5.1 -7.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PFR28_05125 -5.1 -9.7 ATP phosphoribosyltransferase regulatory subunit compare
PFR28_02823 -5.1 -3.5 3-isopropylmalate dehydratase small subunit 1 compare
PFR28_00186 -5.0 -6.9 ATP phosphoribosyltransferase compare
PFR28_00573 -5.0 -13.8 Glucose-6-phosphate 1-dehydrogenase compare
PFR28_02497 -5.0 -13.3 Molybdenum transport system permease protein ModB compare
PFR28_05015 -5.0 -26.8 Glutamate synthase [NADPH] large chain compare
PFR28_04278 -5.0 -13.6 Dihydroxy-acid dehydratase compare
PFR28_00187 -4.9 -15.9 Histidinol dehydrogenase compare
PFR28_05016 -4.8 -17.1 Glutamate synthase [NADPH] small chain compare
PFR28_03143 -4.8 -17.0 hypothetical protein compare
PFR28_01142 -4.8 -21.2 Transaldolase compare
PFR28_04929 -4.8 -6.5 Histidine biosynthesis bifunctional protein HisB compare
PFR28_02736 -4.6 -12.3 Arabinose import ATP-binding protein AraG compare
PFR28_04832 -4.5 -15.3 putative phosphatase compare
PFR28_03714 -4.4 -19.2 RNA polymerase-binding transcription factor DksA compare
PFR28_04202 -4.4 -3.0 5,10-methylenetetrahydrofolate reductase compare
PFR28_02824 -4.4 -8.0 3-isopropylmalate dehydratase large subunit compare
PFR28_00926 -4.3 -3.0 hypothetical protein compare
PFR28_03724 -4.3 -9.6 Glucose-6-phosphate isomerase compare
PFR28_01063 -4.3 -24.0 putative xanthine dehydrogenase subunit D conserved
PFR28_01061 -4.3 -18.1 Guanine deaminase conserved
PFR28_03145 -4.3 -5.6 allantoicase compare
PFR28_04930 -4.3 -12.0 Imidazole glycerol phosphate synthase subunit HisH compare
PFR28_02737 -4.3 -6.0 Ribose import binding protein RbsB compare
PFR28_03217 -4.3 -2.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
PFR28_03551 -4.2 -8.4 Cyclic pyranopterin monophosphate synthase compare
PFR28_02810 -4.2 -19.4 O-succinylhomoserine sulfhydrylase compare
PFR28_00305 -4.2 -10.8 2-isopropylmalate synthase compare
PFR28_03144 -4.2 -11.9 Uric acid degradation bifunctional protein PucL compare
PFR28_03363 -4.2 -19.2 Ornithine carbamoyltransferase 1, anabolic compare
PFR28_03698 -4.2 -11.7 Acetolactate synthase isozyme 3 small subunit compare
PFR28_01064 -4.2 -15.7 hypothetical protein conserved
PFR28_02735 -4.1 -7.4 Ribose import permease protein RbsC compare
PFR28_04345 -4.1 -20.6 Polyphosphate kinase compare
PFR28_02811 -4.1 -6.7 Amidophosphoribosyltransferase compare
PFR28_01365 -4.1 -8.6 hypothetical protein compare
PFR28_04308 -4.0 -3.9 Amino-acid acetyltransferase compare
PFR28_01062 -4.0 -9.9 hypothetical protein conserved
PFR28_03147 -4.0 -18.1 hypothetical protein compare
PFR28_00188 -3.9 -13.7 Histidinol-phosphate aminotransferase compare
PFR28_04252 -3.9 -10.3 Thiazole synthase compare
PFR28_05105 -3.9 -12.7 Phosphoserine phosphatase SerB2 compare
PFR28_04245 -3.9 -16.9 Homoserine O-succinyltransferase compare
PFR28_03718 -3.9 -4.6 Transcriptional regulatory protein ZraR compare
PFR28_03110 -3.9 -18.1 Glyoxylate carboligase conserved
PFR28_04985 -3.9 -6.4 Phosphoribosyl-ATP pyrophosphatase compare
PFR28_04246 -3.9 -13.5 Bifunctional methionine biosynthesis protein MetXA/MetW compare
PFR28_03635 -3.9 -5.3 Malate:quinone oxidoreductase compare
PFR28_02603 -3.9 -9.6 Siroheme synthase compare
PFR28_03146 -3.8 -11.4 Ureidoglycolate lyase compare
PFR28_03137 -3.8 -19.7 Adenine permease AdeQ conserved
PFR28_03699 -3.8 -9.1 Acetolactate synthase isozyme 3 large subunit compare
PFR28_03223 -3.6 -17.6 GTP pyrophosphokinase compare
PFR28_03142 -3.6 -4.6 5-hydroxyisourate hydrolase compare
PFR28_05071 -3.6 -4.7 D-inositol-3-phosphate glycosyltransferase compare
PFR28_04048 -3.5 -10.9 Phosphoglycolate phosphatase compare
PFR28_03000 -3.5 -7.1 'GTP 3',8-cyclase' transl_table=11 compare
PFR28_03596 -3.5 -3.3 Transcriptional regulator MraZ compare
PFR28_00561 -3.5 -2.4 Phosphogluconate dehydratase compare
PFR28_01366 -3.4 -11.8 Sulfite reductase [ferredoxin] compare
PFR28_03843 -3.4 -8.0 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
PFR28_01006 -3.4 -10.9 Molybdopterin molybdenumtransferase compare
PFR28_01930 -3.3 -5.5 HTH-type transcriptional regulator McbR compare
PFR28_03413 -3.3 -5.5 Holliday junction ATP-dependent DNA helicase RuvA compare
PFR28_04887 -3.2 -3.7 '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 compare
PFR28_03549 -3.2 -2.6 Molybdopterin synthase catalytic subunit compare
PFR28_05091 -3.1 -16.0 Phosphomethylpyrimidine synthase compare
PFR28_05139 -3.1 -3.6 hypothetical protein compare
PFR28_01005 -2.9 -7.9 Molybdenum cofactor biosynthesis protein B compare
PFR28_03877 -2.9 -6.0 Holin-like protein CidA compare
PFR28_04842 -2.9 -5.5 D-3-phosphoglycerate dehydrogenase compare
PFR28_02731 -2.9 -10.7 Pyrimidine-specific ribonucleoside hydrolase RihB conserved
PFR28_03844 -2.8 -6.1 Thiamine-phosphate synthase compare
PFR28_02496 -2.8 -8.4 Molybdate-binding protein ModA compare
PFR28_00098 -2.8 -8.8 Nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
PFR28_04071 -2.7 -2.2 Multifunctional CCA protein compare
PFR28_03423 -2.7 -12.3 Porin D compare
PFR28_03876 -2.6 -9.7 Inner membrane protein YohK compare
PFR28_05075 -2.6 -16.0 hypothetical protein compare
PFR28_03429 -2.5 -6.0 Thiamine-phosphate synthase compare
PFR28_03111 -2.5 -11.6 Hydroxypyruvate isomerase conserved
PFR28_00064 -2.5 -13.0 Pyruvate dehydrogenase complex repressor compare
PFR28_03388 -2.5 -12.5 Quinolinate synthase A compare
PFR28_04030 -2.4 -16.0 hypothetical protein compare
PFR28_00403 -2.3 -6.8 Regulator of sigma-E protease RseP compare
PFR28_02484 -2.2 -11.3 UTP--glucose-1-phosphate uridylyltransferase compare
PFR28_02846 -2.2 -7.3 Adaptive-response sensory-kinase SasA compare
PFR28_01113 -2.2 -5.1 DNA topoisomerase 1 compare
PFR28_03414 -2.2 -3.6 Crossover junction endodeoxyribonuclease RuvC compare
PFR28_04992 -2.2 -2.1 hypothetical protein compare
PFR28_03412 -2.1 -6.0 Holliday junction ATP-dependent DNA helicase RuvB compare
PFR28_04436 -2.1 -9.2 hypothetical protein compare
PFR28_04485 -2.0 -2.6 Phosphate-specific transport system accessory protein PhoU compare
PFR28_00498 -2.0 -2.3 Cold shock protein CapB compare
PFR28_00851 -1.9 -2.3 Flagellum site-determining protein YlxH compare
PFR28_00966 -1.9 -13.6 HTH-type transcriptional regulator CysB compare
PFR28_02498 -1.9 -8.6 Vitamin B12 import ATP-binding protein BtuD conserved
PFR28_04834 -1.9 -12.0 L-threonine dehydratase biosynthetic IlvA compare
PFR28_00873 -1.8 -5.4 hypothetical protein compare
PFR28_00918 -1.8 -8.4 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
PFR28_04064 -1.8 -4.2 Ribosomal RNA small subunit methyltransferase A compare
PFR28_00928 -1.8 -4.1 putative sugar transferase EpsL compare
PFR28_01156 -1.8 -5.9 hypothetical protein compare
PFR28_03369 -1.8 -6.6 Glycerol-3-phosphate regulon repressor compare
PFR28_02469 -1.7 -8.3 Glycerate 2-kinase compare
PFR28_05244 -1.7 -11.4 Copper-exporting P-type ATPase compare
PFR28_00932 -1.7 -14.4 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase compare
PFR28_04565 -1.6 -10.4 Protein RarD compare
PFR28_03012 -1.6 -4.5 Phosphate acyltransferase compare
PFR28_01060 -1.6 -5.8 HTH-type transcriptional repressor NanR compare
PFR28_03282 -1.6 -7.7 Arginine N-succinyltransferase subunit alpha compare
PFR28_04233 -1.6 -4.6 hypothetical protein compare
PFR28_00930 -1.6 -6.8 GDP-perosamine synthase compare
PFR28_01083 -1.6 -7.0 putative copper-importing P-type ATPase A compare
PFR28_00855 -1.5 -5.1 hypothetical protein compare
PFR28_02817 -1.5 -6.7 tRNA pseudouridine synthase A compare
PFR28_04059 -1.5 -9.3 N-acetylmuramate alpha-1-phosphate uridylyltransferase compare
PFR28_02734 -1.5 -3.2 Ribose operon repressor compare
PFR28_01313 -1.5 -4.3 hypothetical protein compare
PFR28_00853 -1.5 -6.9 Chemotaxis protein CheY compare
PFR28_04103 -1.5 -7.8 Biotin synthase compare
PFR28_00068 -1.5 -1.2 hypothetical protein compare
PFR28_05005 -1.5 -8.0 NADP-dependent malic enzyme compare
PFR28_03420 -1.5 -4.3 hypothetical protein compare
PFR28_04031 -1.5 -10.6 Anhydro-N-acetylmuramic acid kinase compare
PFR28_00730 -1.4 -4.0 5-oxoprolinase subunit C compare
PFR28_00861 -1.4 -8.6 Chemotaxis protein CheW compare
PFR28_00193 -1.4 -8.8 Sulfate adenylyltransferase subunit 2 compare
PFR28_00194 -1.4 -8.6 Bifunctional enzyme CysN/CysC compare
PFR28_00927 -1.4 -9.1 D-inositol-3-phosphate glycosyltransferase compare
PFR28_04378 -1.4 -3.5 Tyrosine recombinase XerC compare
PFR28_01154 -1.4 -2.5 hypothetical protein compare
PFR28_05212 -1.4 -8.2 Sensor histidine kinase RcsC compare
PFR28_01081 -1.4 -5.3 hypothetical protein compare
PFR28_02613 -1.3 -9.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
PFR28_04262 -1.3 -3.7 Ribosomal RNA small subunit methyltransferase D compare
PFR28_00917 -1.3 -8.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
PFR28_00180 -1.3 -5.1 Intermembrane phospholipid transport system permease protein MlaE compare
PFR28_01230 -1.3 -3.7 Lon protease compare
PFR28_00916 -1.3 -9.2 UDP-N-acetylglucosamine 2-epimerase compare
PFR28_03138 -1.2 -4.7 Homoserine/homoserine lactone efflux protein compare
PFR28_03721 -1.2 -4.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFR28_00856 -1.2 -5.4 Protein-glutamate methylesterase/protein-glutamine glutaminase 1 compare
PFR28_01043 -1.2 -3.8 hypothetical protein compare
PFR28_04831 -1.2 -2.9 RNA pyrophosphohydrolase compare
PFR28_05144 -1.2 -2.8 hypothetical protein compare
PFR28_05079 -1.2 -8.6 hypothetical protein compare
PFR28_04585 -1.2 -5.5 Chromosome partitioning protein ParA compare
PFR28_02983 -1.2 -6.3 HTH-type transcriptional regulator XynR compare
PFR28_01527 -1.2 -5.6 Carboxynorspermidine/carboxyspermidine decarboxylase compare
PFR28_04060 -1.2 -8.7 N-acetylmuramate/N-acetylglucosamine kinase compare
PFR28_01118 -1.2 -2.6 hypothetical protein compare
PFR28_00425 -1.2 -8.6 Protein-L-isoaspartate O-methyltransferase compare
PFR28_02763 -1.2 -1.4 hypothetical protein compare
PFR28_01003 -1.2 -4.3 hypothetical protein compare
PFR28_00689 -1.2 -9.6 L-aspartate oxidase compare
PFR28_00356 -1.2 -4.0 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
PFR28_01319 -1.1 -6.7 1,4-alpha-glucan branching enzyme GlgB compare
PFR28_04621 -1.1 -5.7 High-affinity zinc uptake system protein ZnuA compare
PFR28_01119 -1.1 -3.4 Beta-hexosaminidase compare
PFR28_00495 -1.1 -8.0 hypothetical protein compare
PFR28_03151 -1.1 -2.0 Septum site-determining protein MinC compare
PFR28_00292 -1.1 -3.1 Protein IscX compare
PFR28_03227 -1.1 -7.2 Signal transduction histidine-protein kinase BarA compare
PFR28_04830 -1.1 -6.7 Phosphoenolpyruvate-dependent phosphotransferase system compare
PFR28_02608 -1.0 -1.7 DNA translocase FtsK compare
PFR28_00277 -1.0 -1.8 Queuine tRNA-ribosyltransferase compare
PFR28_03664 -1.0 -2.8 Ribosome-binding ATPase YchF compare
PFR28_04052 -1.0 -8.3 hypothetical protein compare
PFR28_01139 -1.0 -6.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
PFR28_04377 -1.0 -4.5 hypothetical protein compare
PFR28_00182 -1.0 -4.7 Intermembrane phospholipid transport system binding protein MlaC compare
PFR28_04931 -1.0 -1.5 hypothetical protein compare
PFR28_00424 -1.0 -4.3 '5'-nucleotidase SurE' transl_table=11 compare
PFR28_00159 -1.0 -6.3 hypothetical protein compare
PFR28_00184 -1.0 -2.4 hypothetical protein compare
PFR28_03255 -0.9 -6.7 Chemotaxis protein methyltransferase Cher2 compare
PFR28_03704 -0.9 -7.0 hypothetical protein compare
PFR28_04325 -0.9 -4.9 5-formyltetrahydrofolate cyclo-ligase compare
PFR28_03219 -0.9 -7.5 hypothetical protein compare
PFR28_04941 -0.9 -3.2 Protein-export protein SecB compare
PFR28_01182 -0.9 -1.6 hypothetical protein compare
PFR28_04939 -0.9 -2.4 putative protein YibN compare
PFR28_02048 -0.9 -3.2 hypothetical protein compare
PFR28_03615 -0.9 -4.4 hypothetical protein compare
PFR28_04902 -0.9 -5.0 Inner membrane protein YgaZ compare
PFR28_00179 -0.9 -4.0 Intermembrane phospholipid transport system ATP-binding protein MlaF compare
PFR28_04618 -0.9 -2.1 High-affinity zinc uptake system membrane protein ZnuB compare
PFR28_00169 -0.9 -3.8 Phosphocarrier protein NPr compare
PFR28_01028 -0.9 -3.6 Thiol-disulfide oxidoreductase ResA compare
PFR28_03875 -0.9 -0.9 hypothetical protein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source Guanosine in Pseudomonas sp. RS175

For carbon source Guanosine across organisms