Experiment set1IT090 for Rhizobium sp. OAE497

Compare to:

Thymidine carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABIE40_RS28045 +2.1 2.5 hypothetical protein compare
ABIE40_RS28785 +1.8 2.2 ABC-three component system middle component 1 compare
ABIE40_RS27685 +1.8 2.3 hypothetical protein compare
ABIE40_RS07805 +1.6 1.7 hypothetical protein compare
ABIE40_RS20585 +1.6 1.5 ANTAR domain-containing protein compare
ABIE40_RS07105 +1.5 1.1 DNA-binding protein HupB compare
ABIE40_RS29155 +1.5 1.0 transport-associated protein compare
ABIE40_RS13245 +1.4 1.5 CoA pyrophosphatase compare
ABIE40_RS08575 +1.4 2.1 DUF1127 domain-containing protein compare
ABIE40_RS28485 +1.4 1.7 hypothetical protein compare
ABIE40_RS20825 +1.4 1.5 DUF126 domain-containing protein compare
ABIE40_RS21665 +1.3 1.2 ABC transporter ATP-binding protein compare
ABIE40_RS23485 +1.3 1.0 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS11750 +1.3 3.0 chemotaxis protein CheW compare
ABIE40_RS22770 +1.3 1.6 hypothetical protein compare
ABIE40_RS29180 +1.3 1.2 FAD-dependent oxidoreductase compare
ABIE40_RS27920 +1.3 2.6 SDR family oxidoreductase compare
ABIE40_RS01770 +1.2 3.2 hypothetical protein compare
ABIE40_RS08695 +1.2 1.6 hypothetical protein compare
ABIE40_RS26365 +1.2 2.3 NAD-dependent dehydratase compare
ABIE40_RS10185 +1.2 3.6 BolA family transcriptional regulator compare
ABIE40_RS19865 +1.2 3.3 cold-shock protein compare
ABIE40_RS15470 +1.2 1.5 hypothetical protein compare
ABIE40_RS30890 +1.2 1.9 hypothetical protein compare
ABIE40_RS05625 +1.2 0.7 phage tail tape measure protein compare
ABIE40_RS30825 +1.2 1.6 cytochrome c oxidase subunit II compare
ABIE40_RS09135 +1.2 2.8 nucleoside deaminase compare
ABIE40_RS20055 +1.2 1.2 sugar phosphate isomerase/epimerase compare
ABIE40_RS18425 +1.2 3.2 P-II family nitrogen regulator compare
ABIE40_RS26185 +1.1 2.1 pseudoazurin compare
ABIE40_RS14635 +1.1 0.8 urease subunit gamma compare
ABIE40_RS10730 +1.1 3.0 DUF1289 domain-containing protein compare
ABIE40_RS17745 +1.1 1.8 BON domain-containing protein compare
ABIE40_RS07435 +1.1 2.6 hypothetical protein compare
ABIE40_RS04005 +1.1 2.8 DnaJ C-terminal domain-containing protein compare
ABIE40_RS14335 +1.1 1.8 hypothetical protein compare
ABIE40_RS26630 +1.1 1.8 response regulator compare
ABIE40_RS22440 +1.1 2.1 GntR family transcriptional regulator compare
ABIE40_RS30220 +1.1 1.1 hypothetical protein compare
ABIE40_RS02720 +1.1 2.1 DUF2948 family protein compare
ABIE40_RS09535 +1.1 2.0 hypothetical protein compare
ABIE40_RS30720 +1.1 0.6 hypothetical protein compare
ABIE40_RS17060 +1.1 1.0 OsmC family protein compare
ABIE40_RS00675 +1.1 2.3 AlpA family phage regulatory protein compare
ABIE40_RS22690 +1.1 3.5 SDR family oxidoreductase compare
ABIE40_RS10235 +1.1 3.0 glutaminase compare
ABIE40_RS07520 +1.0 2.8 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS01720 +1.0 1.4 N-acetyltransferase compare
ABIE40_RS29010 +1.0 1.0 hypothetical protein compare
ABIE40_RS03250 +1.0 0.7 hypothetical protein compare
ABIE40_RS27925 +1.0 2.3 4-oxalocrotonate tautomerase family protein compare
ABIE40_RS09780 +1.0 2.1 DUF1489 family protein compare
ABIE40_RS08015 +1.0 1.3 type II toxin-antitoxin system PemK/MazF family toxin compare
ABIE40_RS22795 +1.0 1.7 ABC transporter permease compare
ABIE40_RS16360 +1.0 3.1 CrpP-related protein compare
ABIE40_RS07485 +1.0 3.0 leucyl/phenylalanyl-tRNA--protein transferase compare
ABIE40_RS14075 +1.0 1.3 hypothetical protein compare
ABIE40_RS12230 +1.0 1.0 carboxymuconolactone decarboxylase family protein compare
ABIE40_RS15460 +1.0 3.1 response regulator compare
ABIE40_RS30565 +1.0 1.4 hypothetical protein compare
ABIE40_RS27930 +1.0 0.7 nuclear transport factor 2 family protein compare
ABIE40_RS10280 +1.0 1.3 hypothetical protein compare
ABIE40_RS21650 +0.9 2.6 NAD(P)-dependent oxidoreductase compare
ABIE40_RS24435 +0.9 3.0 sugar phosphate isomerase/epimerase compare
ABIE40_RS27850 +0.9 1.5 DUF3253 domain-containing protein compare
ABIE40_RS02200 +0.9 1.3 copper homeostasis protein CutC compare
ABIE40_RS30365 +0.9 1.9 PRC-barrel domain-containing protein compare
ABIE40_RS10085 +0.9 1.8 VWA domain-containing protein compare
ABIE40_RS26995 +0.9 3.0 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS25870 +0.9 1.8 NUDIX domain-containing protein compare
ABIE40_RS03750 +0.9 1.1 hypothetical protein compare
ABIE40_RS03125 +0.9 1.1 rod-binding protein compare
ABIE40_RS27855 +0.9 2.0 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS26440 +0.9 0.8 Ku protein compare
ABIE40_RS14395 +0.9 0.6 hypothetical protein compare
ABIE40_RS28050 +0.9 3.1 helicase-related protein compare
ABIE40_RS08180 +0.9 1.0 GFA family protein compare
ABIE40_RS27490 +0.9 2.2 hypothetical protein compare
ABIE40_RS21990 +0.9 0.6 organic hydroperoxide resistance protein compare
ABIE40_RS27740 +0.9 2.4 hypothetical protein compare
ABIE40_RS00040 +0.9 4.3 class I SAM-dependent methyltransferase compare
ABIE40_RS04045 +0.9 1.1 GNAT family N-acetyltransferase compare
ABIE40_RS06455 +0.9 2.9 GGDEF domain-containing protein compare
ABIE40_RS21155 +0.9 2.8 ornithine cyclodeaminase family protein compare
ABIE40_RS21750 +0.9 1.2 hypothetical protein compare
ABIE40_RS01750 +0.9 1.5 VOC family protein compare
ABIE40_RS09630 +0.9 1.4 antitoxin MazE family protein compare
ABIE40_RS06290 +0.9 3.7 LysE family translocator compare
ABIE40_RS09930 +0.9 1.5 copper chaperone PCu(A)C compare
ABIE40_RS13160 +0.9 1.9 tRNA (cytidine(34)-2'-O)-methyltransferase compare
ABIE40_RS18220 +0.9 1.0 4a-hydroxytetrahydrobiopterin dehydratase compare
ABIE40_RS05895 +0.8 1.3 YciI family protein compare
ABIE40_RS09755 +0.8 2.0 alpha/beta fold hydrolase compare
ABIE40_RS27335 +0.8 1.2 hypothetical protein compare
ABIE40_RS29245 +0.8 1.1 hypothetical protein compare
ABIE40_RS28120 +0.8 1.2 MFS transporter compare
ABIE40_RS05715 +0.8 2.6 PAS domain-containing sensor histidine kinase compare
ABIE40_RS28640 +0.8 1.4 flavodoxin family protein compare
ABIE40_RS15445 +0.8 2.5 CbtA family protein compare
ABIE40_RS19795 +0.8 2.5 cyclic nucleotide-binding domain-containing protein compare
ABIE40_RS23560 +0.8 2.9 adenylate/guanylate cyclase domain-containing protein compare
ABIE40_RS26085 +0.8 3.9 ABC transporter permease compare
ABIE40_RS15750 +0.8 1.3 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
ABIE40_RS08200 +0.8 1.3 VanZ family protein compare
ABIE40_RS27100 +0.8 0.6 type II toxin-antitoxin system VapC family toxin compare
ABIE40_RS14825 +0.8 2.5 alpha/beta hydrolase compare
ABIE40_RS01945 +0.8 0.7 calcium-binding protein compare
ABIE40_RS04375 +0.8 1.9 hypothetical protein compare
ABIE40_RS20615 +0.8 1.8 transporter substrate-binding domain-containing protein compare
ABIE40_RS17030 +0.8 2.9 response regulator compare
ABIE40_RS17365 +0.8 1.6 Flp family type IVb pilin compare
ABIE40_RS00070 +0.8 2.4 sugar phosphate isomerase/epimerase family protein compare
ABIE40_RS05180 +0.8 3.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS23665 +0.8 1.0 hypothetical protein compare
ABIE40_RS18050 +0.8 2.0 YciI-like protein compare
ABIE40_RS30170 +0.8 0.8 gamma-glutamylcyclotransferase family protein compare
ABIE40_RS30020 +0.8 2.4 GntR family transcriptional regulator compare
ABIE40_RS29470 +0.8 1.5 type 1 glutamine amidotransferase domain-containing protein compare
ABIE40_RS07990 +0.8 1.3 DUF2809 domain-containing protein compare
ABIE40_RS18770 +0.8 1.0 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS25565 +0.8 1.3 nitrite reductase small subunit NirD compare
ABIE40_RS14820 +0.8 2.6 DUF6030 family protein compare
ABIE40_RS19470 +0.8 2.2 GNAT family N-acetyltransferase compare
ABIE40_RS17550 +0.8 1.2 hypoxanthine phosphoribosyltransferase compare
ABIE40_RS27350 +0.8 2.0 hypothetical protein compare
ABIE40_RS10340 +0.8 2.3 flagellar biosynthetic protein FliO compare
ABIE40_RS26375 +0.8 2.4 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein compare
ABIE40_RS13145 +0.8 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE40_RS14550 +0.8 1.7 ABC transporter ATP-binding protein compare
ABIE40_RS15415 +0.8 2.0 tripartite tricarboxylate transporter TctB family protein compare
ABIE40_RS30545 +0.8 1.4 DUF982 domain-containing protein compare
ABIE40_RS08510 +0.8 1.4 Mth938-like domain-containing protein compare
ABIE40_RS07525 +0.8 0.6 SRPBCC domain-containing protein compare
ABIE40_RS21715 +0.8 2.6 ABC transporter ATP-binding protein compare
ABIE40_RS26005 +0.8 1.2 hypothetical protein compare
ABIE40_RS27160 +0.8 0.6 low affinity iron permease family protein compare
ABIE40_RS10925 +0.8 1.1 gamma carbonic anhydrase family protein compare
ABIE40_RS13090 +0.8 2.2 hypothetical protein compare
ABIE40_RS20975 +0.8 1.6 DUF982 domain-containing protein compare
ABIE40_RS19310 +0.8 1.4 fumarylacetoacetate hydrolase family protein compare
ABIE40_RS28075 +0.7 1.7 methyl-accepting chemotaxis protein compare
ABIE40_RS00825 +0.7 1.1 uracil phosphoribosyltransferase compare
ABIE40_RS06840 +0.7 1.4 proline racemase family protein compare
ABIE40_RS22845 +0.7 2.4 sugar ABC transporter substrate-binding protein compare
ABIE40_RS08060 +0.7 2.0 4-hydroxy-tetrahydrodipicolinate synthase compare
ABIE40_RS11760 +0.7 1.8 3'-5' exonuclease compare
ABIE40_RS09570 +0.7 0.8 MarR family transcriptional regulator compare
ABIE40_RS17355 +0.7 2.0 ComF family protein compare
ABIE40_RS05980 +0.7 2.4 myo-inosose-2 dehydratase compare
ABIE40_RS25285 +0.7 1.4 cupin domain-containing protein compare
ABIE40_RS28440 +0.7 2.2 alpha/beta hydrolase compare
ABIE40_RS20265 +0.7 2.4 methyl-accepting chemotaxis protein compare
ABIE40_RS27940 +0.7 1.8 Crp/Fnr family transcriptional regulator compare
ABIE40_RS21870 +0.7 1.1 carbohydrate ABC transporter permease compare
ABIE40_RS20145 +0.7 2.6 sugar ABC transporter substrate-binding protein compare
ABIE40_RS26690 +0.7 2.0 hypothetical protein compare
ABIE40_RS01520 +0.7 2.4 SDR family oxidoreductase compare
ABIE40_RS30665 +0.7 1.6 DUF378 domain-containing protein compare
ABIE40_RS15370 +0.7 1.4 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS21075 +0.7 1.8 biotin synthase BioB compare
ABIE40_RS02455 +0.7 2.4 carboxymuconolactone decarboxylase family protein compare
ABIE40_RS20705 +0.7 2.0 DUF1028 domain-containing protein compare
ABIE40_RS06265 +0.7 0.4 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS23065 +0.7 2.2 hypothetical protein compare
ABIE40_RS12640 +0.7 1.0 hypothetical protein compare
ABIE40_RS30700 +0.7 0.5 hypothetical protein compare
ABIE40_RS09060 +0.7 2.0 type II toxin-antitoxin system RatA family toxin compare
ABIE40_RS03955 +0.7 1.8 energy-coupling factor transporter transmembrane protein EcfT compare
ABIE40_RS17600 +0.7 1.4 class I SAM-dependent methyltransferase compare
ABIE40_RS20420 +0.7 2.9 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS15385 +0.7 2.2 ABC transporter permease compare
ABIE40_RS07625 +0.7 0.8 HK97 family phage prohead protease compare
ABIE40_RS03510 +0.7 2.6 DUF937 domain-containing protein compare
ABIE40_RS12585 +0.7 1.4 DUF2188 domain-containing protein compare
ABIE40_RS07590 +0.7 2.7 hypothetical protein compare
ABIE40_RS25190 +0.7 1.3 hypothetical protein compare
ABIE40_RS23670 +0.7 0.9 hypothetical protein compare
ABIE40_RS23595 +0.7 1.6 hypothetical protein compare
ABIE40_RS29495 +0.7 2.1 Rap1a/Tai family immunity protein compare
ABIE40_RS13400 +0.7 1.4 DUF2161 family putative PD-(D/E)XK-type phosphodiesterase compare
ABIE40_RS23335 +0.7 2.4 sll0787 family AIR synthase-like protein compare
ABIE40_RS08535 +0.7 2.2 helix-turn-helix domain-containing protein compare
ABIE40_RS03185 +0.7 1.6 hypothetical protein compare
ABIE40_RS17840 +0.7 3.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
ABIE40_RS11725 +0.7 0.5 hypothetical protein compare
ABIE40_RS08115 +0.7 0.7 hypothetical protein compare
ABIE40_RS09600 +0.7 1.2 FecR family protein compare
ABIE40_RS06490 +0.7 1.1 molybdopterin converting factor subunit 1 compare
ABIE40_RS22875 +0.7 1.0 septum site-determining protein MinD compare
ABIE40_RS15320 +0.7 2.0 hypothetical protein compare
ABIE40_RS27050 +0.7 0.9 hypothetical protein compare
ABIE40_RS05200 +0.7 0.6 hypothetical protein compare
ABIE40_RS21585 +0.7 2.0 GMC family oxidoreductase N-terminal domain-containing protein compare
ABIE40_RS29885 +0.7 2.5 DMT family transporter compare
ABIE40_RS20210 +0.7 1.6 MFS transporter compare
ABIE40_RS30750 +0.7 1.9 alpha/beta hydrolase fold domain-containing protein compare
ABIE40_RS29805 +0.7 2.2 SOS response-associated peptidase compare
ABIE40_RS29530 +0.7 1.9 hypothetical protein compare
ABIE40_RS19220 +0.7 1.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABIE40_RS09065 +0.7 2.4 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Thymidine in Rhizobium sp. OAE497

For carbon source Thymidine across organisms