Experiment set1IT089 for Rhizobium sp. OAE497

Compare to:

Adenine hydrochloride hydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS19355 -6.8 -4.7 thioredoxin compare
ABIE40_RS02340 -6.8 -4.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS19050 -6.6 -6.4 3-isopropylmalate dehydrogenase compare
ABIE40_RS00245 -6.6 -7.8 prephenate dehydratase compare
ABIE40_RS18380 -6.5 -7.8 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS18920 -6.4 -6.2 glutamate 5-kinase compare
ABIE40_RS13330 -6.2 -4.3 2-isopropylmalate synthase compare
ABIE40_RS18590 -6.2 -12.6 homoserine O-succinyltransferase compare
ABIE40_RS17525 -6.1 -3.2 lipoprotein compare
ABIE40_RS09095 -5.8 -4.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS11950 -5.7 -7.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS18775 -5.7 -12.3 pyruvate carboxylase compare
ABIE40_RS06555 -5.6 -3.0 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09155 -5.5 -5.3 DUF934 domain-containing protein compare
ABIE40_RS06730 -5.5 -3.8 riboflavin synthase compare
ABIE40_RS09545 -5.5 -3.3 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.4 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.3 -3.7 histidinol-phosphatase compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.2 -3.6 histidinol dehydrogenase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS10725 -5.1 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS19040 -5.1 -8.6 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS19435 -5.0 -2.6 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS08635 -4.9 -10.5 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10720 -4.9 -3.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11105 -4.9 -3.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS03660 -4.8 -4.7 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS06270 -4.8 -3.3 amidophosphoribosyltransferase compare
ABIE40_RS11150 -4.8 -7.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS11175 -4.8 -3.3 cobyric acid synthase compare
ABIE40_RS09660 -4.8 -14.4 AI-2E family transporter compare
ABIE40_RS09725 -4.8 -3.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS06930 -4.7 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS06560 -4.7 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19440 -4.7 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.7 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS11165 -4.6 -2.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS17650 -4.6 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS09360 -4.6 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS18925 -4.5 -5.4 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS02320 -4.4 -3.0 aspartate aminotransferase family protein compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS01930 -4.4 -2.3 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS13410 -4.3 -5.2 anthranilate synthase compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS00595 -4.3 -9.6 glucokinase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS10180 -4.2 -5.0 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS11155 -4.1 -4.9 cobaltochelatase subunit CobN compare
ABIE40_RS20455 -4.1 -2.1 precorrin-8X methylmutase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS12925 -4.1 -13.3 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS20430 -4.0 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS08645 -4.0 -6.7 LL-diaminopimelate aminotransferase compare
ABIE40_RS16070 -4.0 -3.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS18685 -4.0 -5.4 beta-ketoacyl-ACP reductase compare
ABIE40_RS14985 -4.0 -2.4 glycosyltransferase compare
ABIE40_RS09090 -4.0 -8.4 nitrogen regulation protein NR(I) compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS09150 -3.9 -17.1 nitrite/sulfite reductase compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS12135 -3.9 -2.7 methionine synthase compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS00930 -3.7 -6.7 ABC transporter permease compare
ABIE40_RS20450 -3.7 -3.9 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS11095 -3.7 -5.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS19480 -3.7 -2.5 DUF1402 family protein compare
ABIE40_RS00935 -3.6 -5.5 ABC transporter substrate-binding protein compare
ABIE40_RS16490 -3.6 -11.6 glycogen synthase GlgA compare
ABIE40_RS05430 -3.6 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS14990 -3.6 -11.6 glycosyltransferase family 2 protein compare
ABIE40_RS14980 -3.5 -5.8 glycoside hydrolase family 16 protein compare
ABIE40_RS00725 -3.5 -5.3 DNA cytosine methyltransferase compare
ABIE40_RS05155 -3.5 -5.7 DUF5330 domain-containing protein compare
ABIE40_RS16655 -3.4 -6.7 creatininase family protein compare
ABIE40_RS15855 -3.4 -2.4 cell division protein ZapA compare
ABIE40_RS17590 -3.4 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS09140 -3.4 -11.7 siroheme synthase CysG compare
ABIE40_RS10155 -3.4 -2.0 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS17645 -3.2 -4.9 cobaltochelatase subunit CobT compare
ABIE40_RS10200 -3.2 -2.1 Grx4 family monothiol glutaredoxin compare
ABIE40_RS03190 -3.2 -5.6 phosphogluconate dehydratase compare
ABIE40_RS20445 -3.2 -1.4 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS06050 -3.1 -7.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS00580 -3.1 -3.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS15345 -3.1 -7.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS09720 -3.0 -3.6 GTP cyclohydrolase I FolE compare
ABIE40_RS03405 -3.0 -3.5 anti-sigma factor compare
ABIE40_RS04820 -3.0 -1.9 TetR family transcriptional regulator compare
ABIE40_RS06725 -3.0 -5.5 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS04470 -2.9 -13.5 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS09540 -2.8 -6.3 peptidylprolyl isomerase compare
ABIE40_RS19365 -2.7 -3.6 double-strand break repair protein AddB compare
ABIE40_RS04465 -2.6 -12.7 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS12360 -2.6 -10.5 DUF5131 family protein compare
ABIE40_RS11000 -2.6 -10.5 ABC transporter ATP-binding protein compare
ABIE40_RS11010 -2.5 -12.3 sugar ABC transporter permease compare
ABIE40_RS19700 -2.5 -3.3 MBL fold metallo-hydrolase compare
ABIE40_RS11060 -2.5 -4.0 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS18880 -2.4 -11.5 UDP-glucose 4-epimerase GalE compare
ABIE40_RS10345 -2.4 -4.7 RNA polymerase-binding protein DksA compare
ABIE40_RS22300 -2.4 -5.5 superoxide dismutase compare
ABIE40_RS14955 -2.4 -8.4 sugar transferase compare
ABIE40_RS12845 -2.4 -3.4 glycosyltransferase family 4 protein compare
ABIE40_RS08425 -2.4 -3.0 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS01415 -2.4 -2.3 cysteine synthase A compare
ABIE40_RS04475 -2.3 -9.0 phosphoadenylyl-sulfate reductase compare
ABIE40_RS09685 -2.3 -2.2 nitroreductase compare
ABIE40_RS01055 -2.3 -5.8 translation elongation factor 4 compare
ABIE40_RS16170 -2.3 -2.7 DUF882 domain-containing protein compare
ABIE40_RS07335 -2.3 -1.6 50S ribosomal protein L33 compare
ABIE40_RS11015 -2.3 -7.5 ABC transporter substrate-binding protein compare
ABIE40_RS18640 -2.2 -9.1 M48 family metalloprotease compare
ABIE40_RS00960 -2.2 -4.4 formyltetrahydrofolate deformylase compare
ABIE40_RS11960 -2.2 -2.1 energy-dependent translational throttle protein EttA compare
ABIE40_RS07105 -2.2 -2.7 DNA-binding protein HupB compare
ABIE40_RS06775 -2.1 -2.5 DUF177 domain-containing protein compare
ABIE40_RS19375 -2.1 -4.7 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS19245 -2.1 -4.4 Maf-like protein compare
ABIE40_RS11005 -2.1 -10.8 carbohydrate ABC transporter permease compare
ABIE40_RS05660 -2.1 -3.0 response regulator transcription factor compare
ABIE40_RS27020 -2.1 -2.7 hypothetical protein compare
ABIE40_RS19395 -2.0 -1.9 PTS sugar transporter subunit IIA compare
ABIE40_RS01135 -2.0 -0.9 50S ribosomal protein L20 compare
ABIE40_RS19260 -2.0 -2.6 DNA polymerase III subunit epsilon compare
ABIE40_RS01765 -2.0 -4.8 [protein-PII] uridylyltransferase compare
ABIE40_RS13370 -1.9 -7.9 CDF family cation efflux transporter EmfA compare
ABIE40_RS29155 -1.9 -1.2 transport-associated protein compare
ABIE40_RS15920 -1.9 -0.8 50S ribosomal protein L31 compare
ABIE40_RS19360 -1.9 -4.1 double-strand break repair helicase AddA compare
ABIE40_RS09170 -1.9 -4.1 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS00490 -1.9 -9.1 DNA polymerase I compare
ABIE40_RS05670 -1.9 -6.0 membrane protein compare
ABIE40_RS16570 -1.8 -2.7 tetratricopeptide repeat protein compare
ABIE40_RS08935 -1.8 -2.8 RIP metalloprotease RseP compare
ABIE40_RS19385 -1.8 -6.9 adenosylhomocysteinase compare
ABIE40_RS08140 -1.8 -9.4 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS19645 -1.8 -7.8 acyltransferase compare
ABIE40_RS04505 -1.8 -1.4 YlcI/YnfO family protein compare
ABIE40_RS05625 -1.8 -1.6 phage tail tape measure protein compare
ABIE40_RS16210 -1.8 -7.5 homospermidine synthase compare
ABIE40_RS27395 -1.7 -1.2 hypothetical protein compare
ABIE40_RS05665 -1.7 -2.2 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS11875 -1.7 -0.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS18055 -1.7 -3.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS07740 -1.7 -1.7 elongation factor Tu compare
ABIE40_RS08970 -1.7 -7.6 citrate synthase compare
ABIE40_RS15730 -1.7 -1.8 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS10390 -1.6 -1.7 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS25500 -1.6 -1.1 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS11085 -1.6 -2.3 acyl carrier protein compare
ABIE40_RS12115 -1.6 -2.0 GntR family transcriptional regulator compare
ABIE40_RS28815 -1.6 -4.6 GNAT family N-acetyltransferase compare
ABIE40_RS15010 -1.5 -7.0 metallophosphoesterase compare
ABIE40_RS03250 -1.5 -1.4 hypothetical protein compare
ABIE40_RS08015 -1.5 -1.8 type II toxin-antitoxin system PemK/MazF family toxin compare
ABIE40_RS22190 -1.5 -2.5 HD domain-containing protein compare
ABIE40_RS19455 -1.5 -1.0 DUF2628 domain-containing protein compare
ABIE40_RS04040 -1.5 -1.5 pyrophosphatase compare
ABIE40_RS17290 -1.5 -4.4 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS08980 -1.5 -3.9 transcriptional repressor LexA compare
ABIE40_RS27725 -1.5 -2.1 DUF1236 domain-containing protein compare
ABIE40_RS18735 -1.4 -3.7 TetR/AcrR family transcriptional regulator compare
ABIE40_RS10850 -1.4 -3.3 excinuclease ABC subunit UvrB compare
ABIE40_RS19615 -1.4 -1.6 DUF1109 domain-containing protein compare
ABIE40_RS17585 -1.4 -3.9 DUF2125 domain-containing protein compare
ABIE40_RS18290 -1.4 -6.9 heme ABC transporter permease compare
ABIE40_RS27295 -1.4 -1.1 hypothetical protein compare
ABIE40_RS05685 -1.4 -6.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS10130 -1.3 -2.1 alpha/beta hydrolase compare
ABIE40_RS28420 -1.3 -1.5 30S ribosomal protein S21 compare
ABIE40_RS15455 -1.3 -1.7 histidine phosphatase family protein compare
ABIE40_RS28025 -1.3 -2.6 VOC family protein compare
ABIE40_RS11490 -1.3 -4.2 acetolactate synthase small subunit compare
ABIE40_RS09145 -1.3 -3.9 DUF2849 domain-containing protein compare
ABIE40_RS09980 -1.3 -1.7 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS06220 -1.2 -8.0 citramalate synthase compare
ABIE40_RS26925 -1.2 -3.2 integrase compare
ABIE40_RS24730 -1.2 -4.0 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS07525 -1.2 -1.0 SRPBCC domain-containing protein compare
ABIE40_RS14850 -1.2 -5.5 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS26290 -1.2 -1.5 SDR family oxidoreductase compare
ABIE40_RS09940 -1.2 -6.8 glycine cleavage system aminomethyltransferase GcvT compare
ABIE40_RS14785 -1.2 -3.6 hypothetical protein compare
ABIE40_RS08865 -1.2 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS14855 -1.2 -4.0 NAD-dependent epimerase compare
ABIE40_RS27110 -1.2 -1.7 helix-turn-helix transcriptional regulator compare
ABIE40_RS06135 -1.2 -2.4 tyrosine phosphatase family protein compare
ABIE40_RS10590 -1.2 -0.9 hypothetical protein compare
ABIE40_RS15745 -1.1 -3.1 Holliday junction branch migration protein RuvA compare
ABIE40_RS13005 -1.1 -3.4 pyrroline-5-carboxylate reductase compare
ABIE40_RS19265 -1.1 -1.4 protein-export chaperone SecB compare
ABIE40_RS07320 -1.1 -1.1 DUF3572 domain-containing protein compare
ABIE40_RS15650 -1.1 -4.8 TIGR00282 family metallophosphoesterase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Adenine hydrochloride hydrate in Rhizobium sp. OAE497

For carbon source Adenine hydrochloride hydrate across organisms