Experiment set1IT088 for Rhizobium sp. OAE497

Compare to:

Adenine hydrochloride hydrate carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS11950 -6.6 -4.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS02340 -6.5 -9.0 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18380 -6.5 -8.9 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS18590 -6.3 -11.3 homoserine O-succinyltransferase compare
ABIE40_RS19040 -5.8 -5.7 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS00245 -5.8 -11.1 prephenate dehydratase compare
ABIE40_RS09095 -5.8 -4.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS19050 -5.8 -10.3 3-isopropylmalate dehydrogenase compare
ABIE40_RS18775 -5.7 -12.2 pyruvate carboxylase compare
ABIE40_RS18920 -5.6 -7.7 glutamate 5-kinase compare
ABIE40_RS06555 -5.6 -3.3 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS13330 -5.6 -12.5 2-isopropylmalate synthase compare
ABIE40_RS09545 -5.5 -3.6 anthranilate phosphoribosyltransferase compare
ABIE40_RS11150 -5.4 -3.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.2 -3.6 histidinol dehydrogenase compare
ABIE40_RS10725 -5.2 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS20460 -5.2 -3.6 precorrin-3B synthase compare
ABIE40_RS01970 -5.2 -3.6 acetylglutamate kinase compare
ABIE40_RS17530 -5.2 -5.0 diaminopimelate decarboxylase compare
ABIE40_RS00595 -5.1 -7.0 glucokinase compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS03660 -5.1 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19435 -5.0 -2.9 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS08635 -5.0 -10.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10720 -5.0 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS16320 -4.9 -5.9 histidinol-phosphatase compare
ABIE40_RS11105 -4.9 -3.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS19460 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11175 -4.8 -3.3 cobyric acid synthase compare
ABIE40_RS10180 -4.7 -3.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06560 -4.7 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19440 -4.7 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.7 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS11165 -4.6 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS20440 -4.6 -3.2 cobalt-precorrin-6A reductase compare
ABIE40_RS17650 -4.6 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS19355 -4.6 -4.1 thioredoxin compare
ABIE40_RS09360 -4.6 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS06730 -4.5 -6.9 riboflavin synthase compare
ABIE40_RS09660 -4.5 -14.8 AI-2E family transporter compare
ABIE40_RS02320 -4.5 -3.1 aspartate aminotransferase family protein compare
ABIE40_RS01930 -4.4 -2.5 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS11095 -4.4 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS06270 -4.4 -7.3 amidophosphoribosyltransferase compare
ABIE40_RS13410 -4.4 -5.2 anthranilate synthase compare
ABIE40_RS09725 -4.4 -4.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS18925 -4.2 -5.8 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS20455 -4.2 -2.4 precorrin-8X methylmutase compare
ABIE40_RS11155 -4.2 -4.1 cobaltochelatase subunit CobN compare
ABIE40_RS17595 -4.2 -4.1 histidinol-phosphate transaminase compare
ABIE40_RS03190 -4.2 -2.9 phosphogluconate dehydratase compare
ABIE40_RS20430 -4.2 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS06930 -4.1 -5.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS16655 -4.1 -7.4 creatininase family protein compare
ABIE40_RS20465 -4.0 -2.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS14980 -4.0 -4.7 glycoside hydrolase family 16 protein compare
ABIE40_RS20435 -4.0 -3.8 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS08005 -4.0 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS12925 -3.9 -13.0 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS03405 -3.9 -2.7 anti-sigma factor compare
ABIE40_RS12135 -3.9 -2.7 methionine synthase compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS19455 -3.9 -2.8 DUF2628 domain-containing protein compare
ABIE40_RS09090 -3.8 -8.5 nitrogen regulation protein NR(I) compare
ABIE40_RS17645 -3.8 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS08645 -3.8 -6.7 LL-diaminopimelate aminotransferase compare
ABIE40_RS09150 -3.8 -17.7 nitrite/sulfite reductase compare
ABIE40_RS16070 -3.8 -4.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS09155 -3.6 -6.4 DUF934 domain-containing protein compare
ABIE40_RS05430 -3.6 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS07105 -3.5 -2.8 DNA-binding protein HupB compare
ABIE40_RS05660 -3.5 -4.1 response regulator transcription factor compare
ABIE40_RS20450 -3.5 -3.8 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS15920 -3.4 -1.1 50S ribosomal protein L31 compare
ABIE40_RS17590 -3.4 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS06050 -3.4 -6.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS10155 -3.4 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS06725 -3.3 -6.9 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS20445 -3.3 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS10200 -3.2 -2.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS16490 -3.2 -11.5 glycogen synthase GlgA compare
ABIE40_RS15345 -3.1 -10.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS00930 -3.1 -7.9 ABC transporter permease compare
ABIE40_RS00935 -3.1 -6.2 ABC transporter substrate-binding protein compare
ABIE40_RS00580 -3.0 -3.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS17525 -3.0 -2.5 lipoprotein compare
ABIE40_RS01765 -3.0 -6.5 [protein-PII] uridylyltransferase compare
ABIE40_RS22300 -2.9 -5.2 superoxide dismutase compare
ABIE40_RS09140 -2.9 -9.9 siroheme synthase CysG compare
ABIE40_RS04470 -2.8 -14.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS14985 -2.8 -2.4 glycosyltransferase compare
ABIE40_RS00725 -2.7 -5.1 DNA cytosine methyltransferase compare
ABIE40_RS18720 -2.6 -2.5 polyprenyl synthetase family protein compare
ABIE40_RS11000 -2.6 -12.5 ABC transporter ATP-binding protein compare
ABIE40_RS03685 -2.6 -2.1 hypothetical protein compare
ABIE40_RS12360 -2.6 -11.5 DUF5131 family protein compare
ABIE40_RS09540 -2.6 -5.4 peptidylprolyl isomerase compare
ABIE40_RS19480 -2.6 -3.8 DUF1402 family protein compare
ABIE40_RS10345 -2.6 -5.8 RNA polymerase-binding protein DksA compare
ABIE40_RS25500 -2.6 -1.5 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS15855 -2.5 -2.2 cell division protein ZapA compare
ABIE40_RS14955 -2.5 -8.6 sugar transferase compare
ABIE40_RS14990 -2.5 -9.6 glycosyltransferase family 2 protein compare
ABIE40_RS11015 -2.5 -9.2 ABC transporter substrate-binding protein compare
ABIE40_RS11960 -2.5 -1.7 energy-dependent translational throttle protein EttA compare
ABIE40_RS11005 -2.4 -12.4 carbohydrate ABC transporter permease compare
ABIE40_RS04465 -2.4 -12.4 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS18055 -2.4 -4.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS19260 -2.4 -3.2 DNA polymerase III subunit epsilon compare
ABIE40_RS04475 -2.4 -9.7 phosphoadenylyl-sulfate reductase compare
ABIE40_RS09720 -2.3 -4.3 GTP cyclohydrolase I FolE compare
ABIE40_RS18880 -2.3 -10.6 UDP-glucose 4-epimerase GalE compare
ABIE40_RS11010 -2.3 -12.7 sugar ABC transporter permease compare
ABIE40_RS19395 -2.3 -3.8 PTS sugar transporter subunit IIA compare
ABIE40_RS01055 -2.2 -5.8 translation elongation factor 4 compare
ABIE40_RS06775 -2.2 -3.4 DUF177 domain-containing protein compare
ABIE40_RS19245 -2.2 -3.3 Maf-like protein compare
ABIE40_RS08425 -2.2 -3.1 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS24490 -2.1 -1.6 flavin reductase compare
ABIE40_RS19365 -2.1 -2.9 double-strand break repair protein AddB compare
ABIE40_RS28815 -2.0 -6.0 GNAT family N-acetyltransferase compare
ABIE40_RS15730 -2.0 -2.9 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS16210 -1.9 -7.6 homospermidine synthase compare
ABIE40_RS06645 -1.9 -2.2 hypothetical protein compare
ABIE40_RS19360 -1.9 -4.1 double-strand break repair helicase AddA compare
ABIE40_RS00340 -1.9 -3.2 30S ribosome-binding factor RbfA compare
ABIE40_RS18640 -1.8 -8.3 M48 family metalloprotease compare
ABIE40_RS13370 -1.8 -8.8 CDF family cation efflux transporter EmfA compare
ABIE40_RS11060 -1.8 -3.6 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS08140 -1.8 -9.9 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS05155 -1.7 -4.0 DUF5330 domain-containing protein compare
ABIE40_RS27110 -1.7 -2.4 helix-turn-helix transcriptional regulator compare
ABIE40_RS23670 -1.7 -2.2 hypothetical protein compare
ABIE40_RS16570 -1.7 -2.7 tetratricopeptide repeat protein compare
ABIE40_RS06700 -1.7 -3.2 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS15760 -1.7 -5.4 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS06720 -1.7 -1.7 transcriptional regulator NrdR compare
ABIE40_RS19645 -1.6 -8.7 acyltransferase compare
ABIE40_RS12845 -1.6 -3.2 glycosyltransferase family 4 protein compare
ABIE40_RS18970 -1.6 -2.0 murein hydrolase activator EnvC compare
ABIE40_RS00490 -1.6 -7.7 DNA polymerase I compare
ABIE40_RS22665 -1.6 -2.7 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS28120 -1.6 -1.9 MFS transporter compare
ABIE40_RS23845 -1.5 -2.3 hypothetical protein compare
ABIE40_RS18255 -1.5 -1.7 hypothetical protein compare
ABIE40_RS21840 -1.5 -1.4 lysophospholipid acyltransferase family protein compare
ABIE40_RS10140 -1.5 -2.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS03815 -1.5 -1.9 DUF6101 family protein compare
ABIE40_RS19385 -1.5 -6.1 adenosylhomocysteinase compare
ABIE40_RS08970 -1.5 -6.2 citrate synthase compare
ABIE40_RS00450 -1.4 -3.8 molecular chaperone DnaJ compare
ABIE40_RS09425 -1.4 -3.6 peptidylprolyl isomerase compare
ABIE40_RS04940 -1.4 -1.8 hypothetical protein compare
ABIE40_RS06220 -1.4 -8.8 citramalate synthase compare
ABIE40_RS11490 -1.4 -5.1 acetolactate synthase small subunit compare
ABIE40_RS19265 -1.4 -2.9 protein-export chaperone SecB compare
ABIE40_RS07740 -1.4 -1.8 elongation factor Tu compare
ABIE40_RS10590 -1.4 -2.0 hypothetical protein compare
ABIE40_RS09145 -1.3 -3.6 DUF2849 domain-containing protein compare
ABIE40_RS14785 -1.3 -3.6 hypothetical protein compare
ABIE40_RS01135 -1.3 -0.7 50S ribosomal protein L20 compare
ABIE40_RS01705 -1.3 -6.3 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS17565 -1.3 -1.5 ABC transporter permease compare
ABIE40_RS18300 -1.3 -6.2 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS04070 -1.3 -3.5 heme o synthase compare
ABIE40_RS17585 -1.3 -3.6 DUF2125 domain-containing protein compare
ABIE40_RS05665 -1.3 -1.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS18735 -1.3 -4.5 TetR/AcrR family transcriptional regulator compare
ABIE40_RS10850 -1.3 -3.1 excinuclease ABC subunit UvrB compare
ABIE40_RS05670 -1.3 -4.1 membrane protein compare
ABIE40_RS15010 -1.2 -5.6 metallophosphoesterase compare
ABIE40_RS16060 -1.2 -1.8 DUF465 domain-containing protein compare
ABIE40_RS08500 -1.2 -1.7 preprotein translocase subunit YajC compare
ABIE40_RS13005 -1.2 -5.4 pyrroline-5-carboxylate reductase compare
ABIE40_RS29515 -1.2 -1.1 hypothetical protein compare
ABIE40_RS28065 -1.2 -1.3 hypothetical protein compare
ABIE40_RS27665 -1.2 -2.3 hypothetical protein compare
ABIE40_RS24310 -1.2 -4.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS17290 -1.2 -5.2 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS00960 -1.2 -2.6 formyltetrahydrofolate deformylase compare
ABIE40_RS04215 -1.2 -2.1 sensor domain-containing phosphodiesterase compare
ABIE40_RS09950 -1.1 -7.9 aminomethyl-transferring glycine dehydrogenase compare
ABIE40_RS00570 -1.1 -1.2 phosphonate C-P lyase system protein PhnG compare
ABIE40_RS13245 -1.1 -1.5 CoA pyrophosphatase compare
ABIE40_RS08980 -1.1 -3.8 transcriptional repressor LexA compare
ABIE40_RS10420 -1.1 -4.5 MCE family protein compare
ABIE40_RS14790 -1.1 -3.2 RluA family pseudouridine synthase compare
ABIE40_RS30520 -1.1 -0.9 hypothetical protein compare
ABIE40_RS16390 -1.1 -0.9 hypothetical protein compare
ABIE40_RS18240 -1.1 -2.7 ABC transporter ATP-binding protein compare
ABIE40_RS19100 -1.1 -7.3 lytic transglycosylase domain-containing protein compare
ABIE40_RS05685 -1.1 -6.7 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS25725 -1.1 -1.3 helix-turn-helix domain-containing protein compare
ABIE40_RS26290 -1.1 -1.9 SDR family oxidoreductase compare
ABIE40_RS09170 -1.1 -3.1 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS14850 -1.1 -5.7 UDP-glucose/GDP-mannose dehydrogenase family protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Adenine hydrochloride hydrate in Rhizobium sp. OAE497

For carbon source Adenine hydrochloride hydrate across organisms