Experiment set1IT087 for Serratia liquefaciens MT49

Compare to:

Cobalt chloride hexahydrate 60 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI46_24465 +1.4 5.1 HTH-type transcriptional repressor FabR compare
IAI46_01120 +1.3 7.2 NAD(P)H-flavin reductase compare
IAI46_04205 +1.0 6.9 MFS transporter compare
IAI46_14400 +1.0 1.6 YqaE/Pmp3 family membrane protein compare
IAI46_12665 +0.9 2.7 aldehyde dehydrogenase family protein compare
IAI46_23915 +0.9 3.4 glycerol-3-phosphate dehydrogenase compare
IAI46_01200 +0.9 2.1 tRNA-Thr compare
IAI46_01965 +0.9 2.9 protein YrbN compare
IAI46_04965 +0.9 5.2 protoheme IX farnesyltransferase compare
IAI46_12450 +0.8 2.3 SDR family oxidoreductase compare
IAI46_02885 +0.8 2.6 DUF1328 domain-containing protein compare
IAI46_02605 +0.8 2.4 biopolymer transporter ExbD compare
IAI46_11795 +0.8 1.6 xanthine dehydrogenase accessory protein XdhC compare
IAI46_04980 +0.8 6.3 cytochrome o ubiquinol oxidase subunit I compare
IAI46_12320 +0.8 2.9 sigma-54-dependent Fis family transcriptional regulator compare
IAI46_04985 +0.8 4.5 cytochrome o ubiquinol oxidase subunit II compare
IAI46_18005 +0.7 2.2 YfcL family protein compare
IAI46_15250 +0.7 1.5 hypothetical protein compare
IAI46_21325 +0.7 2.5 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
IAI46_17700 +0.7 3.7 NADH-quinone oxidoreductase subunit C/D compare
IAI46_08945 +0.7 2.9 FtsH protease modulator YccA compare
IAI46_09045 +0.7 1.8 pyrimidine utilization protein B compare
IAI46_05905 +0.7 1.9 lipoyl(octanoyl) transferase LipB compare
IAI46_10445 +0.7 1.4 NUDIX hydrolase compare
IAI46_14560 +0.7 1.7 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI46_09095 +0.7 2.1 antibiotic biosynthesis monooxygenase compare
IAI46_19820 +0.7 2.0 N-acetyltransferase compare
IAI46_04975 +0.7 4.2 cytochrome o ubiquinol oxidase subunit III compare
IAI46_15150 +0.7 1.4 hypothetical protein compare
IAI46_11650 +0.7 1.6 hypothetical protein compare
IAI46_12015 +0.6 2.2 MurR/RpiR family transcriptional regulator compare
IAI46_13555 +0.6 2.2 LysR family transcriptional regulator compare
IAI46_20760 +0.6 1.6 FAD assembly factor SdhE compare
IAI46_06660 +0.6 1.9 winged helix-turn-helix domain-containing protein compare
IAI46_04455 +0.6 0.9 DUF1471 domain-containing protein compare
IAI46_12300 +0.6 2.6 ABC transporter ATP-binding protein compare
IAI46_09635 +0.6 1.9 helix-turn-helix transcriptional regulator compare
IAI46_02890 +0.6 1.8 stress-response protein compare
IAI46_11860 +0.6 1.9 HlyD family efflux transporter periplasmic adaptor subunit compare
IAI46_15610 +0.6 1.4 two-component system response regulator NarL compare
IAI46_12330 +0.6 1.4 GNAT family N-acetyltransferase compare
IAI46_16830 +0.6 2.8 helix-turn-helix transcriptional regulator compare
IAI46_21715 +0.6 4.0 TonB system transport protein ExbD compare
IAI46_14600 +0.6 3.9 murein DD-endopeptidase MepM compare
IAI46_05870 +0.6 2.8 transcription antiterminator/RNA stability regulator CspE compare
IAI46_03890 +0.6 1.9 DedA family protein compare
IAI46_17885 +0.6 2.2 tripartite tricarboxylate transporter TctB family protein compare
IAI46_12625 +0.6 2.2 NADH:flavin oxidoreductase/NADH oxidase family protein compare
IAI46_15100 +0.6 2.6 hypothetical protein compare
IAI46_00700 +0.6 3.7 class I adenylate cyclase compare
IAI46_13710 +0.6 2.4 hypothetical protein compare
IAI46_13235 +0.6 1.1 tagatose bisphosphate family class II aldolase compare
IAI46_14155 +0.6 1.1 DeoR/GlpR transcriptional regulator compare
IAI46_04970 +0.6 2.3 cytochrome o ubiquinol oxidase subunit IV compare
IAI46_11810 +0.6 1.9 isochorismatase family protein compare
IAI46_08180 +0.6 2.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
IAI46_16990 +0.6 1.9 citrate lyase subunit alpha compare
IAI46_13140 +0.6 2.7 polyphosphate kinase 2 compare
IAI46_17705 +0.5 2.3 NADH-quinone oxidoreductase subunit B compare
IAI46_08835 +0.5 2.1 intermembrane transport protein PqiB compare
IAI46_01780 +0.5 3.1 gamma-glutamylcyclotransferase compare
IAI46_12240 +0.5 1.4 Gfo/Idh/MocA family oxidoreductase compare
IAI46_07015 +0.5 1.5 LysE family translocator compare
IAI46_14890 +0.5 1.9 PhoP/PhoQ regulator MgrB compare
IAI46_13515 +0.5 1.7 carbonate dehydratase compare
IAI46_06255 +0.5 2.0 succinate dehydrogenase cytochrome b556 subunit compare
IAI46_01680 +0.5 1.8 DUF1471 domain-containing protein compare
IAI46_14930 +0.5 1.6 peptidoglycan-binding protein LysM compare
IAI46_06300 +0.5 2.3 cytochrome d ubiquinol oxidase subunit II compare
IAI46_13505 +0.5 1.4 phage shock protein operon transcriptional activator compare
IAI46_14030 +0.5 1.7 anthranilate phosphoribosyltransferase compare
IAI46_06265 +0.5 3.3 succinate dehydrogenase flavoprotein subunit compare
IAI46_06315 +0.5 1.7 tol-pal system-associated acyl-CoA thioesterase compare
IAI46_24255 +0.5 4.2 response regulator compare
IAI46_11965 +0.5 2.7 hypothetical protein compare
IAI46_15115 +0.5 1.6 hypothetical protein compare
IAI46_09150 +0.5 2.5 dihydrodipicolinate synthase family protein compare
IAI46_10060 +0.5 1.5 hypothetical protein compare
IAI46_00615 +0.5 2.6 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI46_08870 +0.5 1.9 macrodomain Ter protein MatP compare
IAI46_11295 +0.5 1.6 NAD(P)-dependent oxidoreductase compare
IAI46_12765 +0.5 1.9 cytochrome c compare
IAI46_13800 +0.5 1.7 hypothetical protein compare
IAI46_20735 +0.5 3.3 flavodoxin FldB compare
IAI46_19345 +0.5 1.1 iron-sulfur cluster assembly protein IscA compare
IAI46_12990 +0.5 1.9 cation diffusion facilitator family transporter compare
IAI46_13155 +0.5 2.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
IAI46_13020 +0.5 2.9 iron ABC transporter permease compare
IAI46_09300 +0.5 1.4 AlpA family phage regulatory protein compare
IAI46_10425 +0.5 2.5 GNAT family N-acetyltransferase compare
IAI46_12080 +0.5 1.1 amino acid ABC transporter ATP-binding protein compare
IAI46_02165 +0.5 1.9 colicin-D compare
IAI46_23010 +0.5 2.5 diacylglycerol kinase compare
IAI46_20035 +0.5 1.7 YfiM family lipoprotein compare
IAI46_23835 +0.5 1.5 Fe-S biogenesis protein NfuA compare
IAI46_09400 +0.5 0.9 hypothetical protein compare
IAI46_21455 +0.5 1.6 YggL family protein compare
IAI46_07550 +0.5 1.9 adenylate kinase compare
IAI46_05540 +0.5 1.5 type VI secretion system tube protein Hcp compare
IAI46_17235 +0.5 1.6 1-phosphofructokinase compare
IAI46_13520 +0.5 1.6 GTP cyclohydrolase I FolE2 compare
IAI46_12130 +0.5 1.2 VOC family protein compare
IAI46_16325 +0.5 1.5 hypothetical protein compare
IAI46_15195 +0.5 1.9 helix-turn-helix domain-containing protein compare
IAI46_00605 +0.5 1.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
IAI46_06155 +0.5 0.8 DUF3861 domain-containing protein compare
IAI46_17520 +0.5 2.4 nicotinamide mononucleotide deamidase-related protein YfaY compare
IAI46_06150 +0.5 1.2 helix-turn-helix transcriptional regulator compare
IAI46_20515 +0.5 2.0 helix-turn-helix transcriptional regulator compare
IAI46_23685 +0.5 1.0 ribulose-phosphate 3-epimerase compare
IAI46_12395 +0.5 1.6 alpha/beta hydrolase compare
IAI46_19735 +0.5 1.6 histidine kinase compare
IAI46_09460 +0.5 1.2 phenylalanyl-tRNA synthetase subunit beta compare
IAI46_14145 +0.5 1.9 cardiolipin synthase compare
IAI46_15875 +0.5 1.9 flagellar motor switch protein FliM compare
IAI46_16420 +0.4 1.4 DMT family transporter compare
IAI46_16070 +0.4 1.7 universal stress protein UspC compare
IAI46_15005 +0.4 1.5 hypothetical protein compare
IAI46_13335 +0.4 1.4 FMN-dependent NADH-azoreductase compare
IAI46_16595 +0.4 1.7 phosphatase PAP2 family protein compare
IAI46_15965 +0.4 1.6 flagellar basal body P-ring formation protein FlgA compare
IAI46_14255 +0.4 2.3 patatin-like phospholipase RssA compare
IAI46_08740 +0.4 2.1 YcbK family protein compare
IAI46_10165 +0.4 1.5 universal stress protein compare
IAI46_12760 +0.4 1.9 DMT family transporter compare
IAI46_09090 +0.4 2.6 MFS transporter compare
IAI46_09985 +0.4 1.7 RNA polymerase-binding protein DksA compare
IAI46_25120 +0.4 1.8 F0F1 ATP synthase subunit I compare
IAI46_10895 +0.4 1.7 type V toxin-antitoxin system endoribonuclease antitoxin GhoS compare
IAI46_14260 +0.4 2.2 YchJ family protein compare
IAI46_22235 +0.4 2.2 hypothetical protein compare
IAI46_07595 +0.4 1.6 aldolase compare
IAI46_12615 +0.4 1.1 hypothetical protein compare
IAI46_05590 +0.4 1.0 DotU family type IV/VI secretion system protein compare
IAI46_04960 +0.4 3.0 MFS transporter compare
IAI46_11990 +0.4 1.2 MoaF N-terminal domain-containing protein compare
IAI46_12245 +0.4 1.2 TIM barrel protein compare
IAI46_12685 +0.4 1.4 Glu/Leu/Phe/Val dehydrogenase compare
IAI46_04860 +0.4 1.2 response regulator transcription factor compare
IAI46_17675 +0.4 1.3 NADH-quinone oxidoreductase subunit NuoI compare
IAI46_15320 +0.4 2.2 N-succinylarginine dihydrolase compare
IAI46_11975 +0.4 2.4 DMT family transporter compare
IAI46_08530 +0.4 1.3 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI46_04655 +0.4 1.1 shikimate kinase AroL compare
IAI46_17780 +0.4 1.9 TIGR01777 family protein compare
IAI46_20910 +0.4 2.5 LysR family transcriptional regulator ArgP compare
IAI46_13290 +0.4 1.8 hypothetical protein compare
IAI46_11775 +0.4 1.6 ROK family transcriptional regulator compare
IAI46_02385 +0.4 1.1 hypothetical protein compare
IAI46_12780 +0.4 1.7 2-hydroxyacid dehydrogenase compare
IAI46_20855 +0.4 0.9 glycine cleavage system protein GcvH compare
IAI46_10505 +0.4 1.7 DUF1835 domain-containing protein compare
IAI46_02715 +0.4 2.1 SDR family oxidoreductase compare
IAI46_16410 +0.4 1.4 phenylacetic acid degradation protein PaaY compare
IAI46_05340 +0.4 1.6 SDR family oxidoreductase compare
IAI46_11420 +0.4 1.4 RidA family protein compare
IAI46_13010 +0.4 2.3 oligopeptide ABC transporter substrate-binding protein OppA compare
IAI46_17620 +0.4 2.0 LysR family transcriptional regulator compare
IAI46_12915 +0.4 0.6 DUF1428 family protein compare
IAI46_01430 +0.4 2.1 molecular chaperone TorD compare
IAI46_00570 +0.4 2.2 exopolyphosphatase compare
IAI46_24245 +0.4 2.2 molybdopterin-dependent oxidoreductase compare
IAI46_06290 +0.4 1.4 succinate--CoA ligase subunit alpha compare
IAI46_14010 +0.4 1.5 threonylcarbamoyl-AMP synthase compare
IAI46_14120 +0.4 1.3 DUF1471 domain-containing protein compare
IAI46_00600 +0.4 2.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
IAI46_18550 +0.4 0.8 YaiI/YqxD family protein compare
IAI46_15335 +0.4 1.7 aspartate aminotransferase family protein compare
IAI46_17650 +0.4 1.7 NADH-quinone oxidoreductase subunit NuoN compare
IAI46_15030 +0.4 1.3 hypothetical protein compare
IAI46_11235 +0.4 1.4 LysR family transcriptional regulator compare
IAI46_10725 +0.4 1.3 ASCH domain-containing protein compare
IAI46_15485 +0.4 1.4 molecular chaperone compare
IAI46_21505 +0.4 2.0 transposase compare
IAI46_11720 +0.4 1.2 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG compare
IAI46_20460 +0.4 2.2 DNA mismatch repair endonuclease MutH compare
IAI46_17685 +0.4 2.2 NADH-quinone oxidoreductase subunit NuoG compare
IAI46_18865 +0.4 0.7 E3 ubiquitin--protein ligase compare
IAI46_07025 +0.4 2.1 hypothetical protein compare
IAI46_09200 +0.4 1.3 DUF2594 family protein compare
IAI46_20595 +0.4 0.9 hypothetical protein compare
IAI46_17300 +0.4 2.0 phosphatase PAP2 family protein compare
IAI46_11590 +0.4 0.8 NUDIX hydrolase compare
IAI46_21720 +0.4 1.6 tol-pal system-associated acyl-CoA thioesterase compare
IAI46_16640 +0.4 1.3 hypothetical protein compare
IAI46_24625 +0.4 1.2 DUF805 domain-containing protein compare
IAI46_06465 +0.4 1.5 class I SAM-dependent methyltransferase compare
IAI46_10730 +0.4 1.0 hypothetical protein compare
IAI46_17655 +0.4 1.3 NADH-quinone oxidoreductase subunit M compare
IAI46_18535 +0.4 1.6 GNAT family acetyltransferase compare
IAI46_05315 +0.4 0.7 Cu(I)-responsive transcriptional regulator compare
IAI46_23805 +0.4 1.6 ferrous iron transporter A compare
IAI46_16100 +0.4 1.1 ornithine cyclodeaminase family protein compare
IAI46_15725 +0.4 1.9 deferrochelatase/peroxidase EfeB compare
IAI46_14615 +0.4 1.0 zinc ABC transporter permease subunit ZnuB compare
IAI46_10115 +0.4 1.2 FadR family transcriptional regulator compare
IAI46_15665 +0.4 1.6 hypothetical protein compare
IAI46_12250 +0.4 1.4 substrate-binding domain-containing protein compare
IAI46_17325 +0.4 2.1 ABC transporter permease subunit compare
IAI46_11785 +0.4 0.8 xanthine dehydrogenase small subunit compare


Specific Phenotypes

For 1 genes in this experiment

For stress Cobalt chloride hexahydrate in Serratia liquefaciens MT49

For stress Cobalt chloride hexahydrate across organisms