Experiment set1IT083 for Rhizobium sp. OAE497

Compare to:

casamino acids carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS00460 -6.8 -2.2 transglycosylase domain-containing protein compare
ABIE40_RS15855 -6.5 -2.1 cell division protein ZapA compare
ABIE40_RS29335 -6.4 -2.6 hypothetical protein compare
ABIE40_RS19050 -6.4 -4.4 3-isopropylmalate dehydrogenase compare
ABIE40_RS19355 -6.3 -2.7 thioredoxin compare
ABIE40_RS12855 -6.3 -4.3 glycosyltransferase family 2 protein compare
ABIE40_RS11950 -5.9 -4.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS00245 -5.9 -5.7 prephenate dehydratase compare
ABIE40_RS19645 -5.9 -9.8 acyltransferase compare
ABIE40_RS09660 -5.8 -4.0 AI-2E family transporter compare
ABIE40_RS19415 -5.7 -12.2 phosphoenolpyruvate carboxykinase compare
ABIE40_RS14940 -5.7 -11.0 acyltransferase compare
ABIE40_RS17565 -5.7 -1.8 ABC transporter permease compare
ABIE40_RS18380 -5.6 -10.8 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS13330 -5.6 -3.9 2-isopropylmalate synthase compare
ABIE40_RS19040 -5.6 -3.9 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS29240 -5.5 -1.8 cold-shock protein compare
ABIE40_RS04820 -5.5 -2.1 TetR family transcriptional regulator compare
ABIE40_RS17525 -5.5 -1.8 lipoprotein compare
ABIE40_RS02340 -5.5 -10.5 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18590 -5.4 -13.9 homoserine O-succinyltransferase compare
ABIE40_RS14850 -5.4 -8.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS30315 -5.3 -1.0 hypothetical protein compare
ABIE40_RS09095 -5.1 -2.7 PAS domain-containing sensor histidine kinase compare
ABIE40_RS24490 -5.1 -1.0 flavin reductase compare
ABIE40_RS30705 -5.1 -1.9 hypothetical protein compare
ABIE40_RS05670 -5.1 -3.4 membrane protein compare
ABIE40_RS12845 -5.1 -2.3 glycosyltransferase family 4 protein compare
ABIE40_RS17585 -5.0 -3.0 DUF2125 domain-containing protein compare
ABIE40_RS06555 -5.0 -1.6 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS06775 -5.0 -2.3 DUF177 domain-containing protein compare
ABIE40_RS11810 -4.9 -3.4 D-alanine--D-alanine ligase compare
ABIE40_RS18920 -4.9 -4.4 glutamate 5-kinase compare
ABIE40_RS29115 -4.9 -0.9 DUF3606 domain-containing protein compare
ABIE40_RS14990 -4.9 -8.8 glycosyltransferase family 2 protein compare
ABIE40_RS29780 -4.9 -1.6 hypothetical protein compare
ABIE40_RS05545 -4.9 -2.1 Dabb family protein compare
ABIE40_RS06730 -4.9 -2.8 riboflavin synthase compare
ABIE40_RS19265 -4.9 -2.0 protein-export chaperone SecB compare
ABIE40_RS22085 -4.9 -1.8 putative quinol monooxygenase compare
ABIE40_RS16645 -4.8 -14.5 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS09545 -4.8 -1.8 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -4.8 -3.3 diaminopimelate decarboxylase compare
ABIE40_RS16320 -4.8 -3.3 histidinol-phosphatase compare
ABIE40_RS04215 -4.8 -2.0 sensor domain-containing phosphodiesterase compare
ABIE40_RS20460 -4.7 -2.0 precorrin-3B synthase compare
ABIE40_RS15730 -4.7 -2.3 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS03665 -4.6 -2.9 ATP phosphoribosyltransferase compare
ABIE40_RS07105 -4.6 -1.5 DNA-binding protein HupB compare
ABIE40_RS16660 -4.6 -2.3 GTP-binding protein compare
ABIE40_RS02725 -4.6 -3.2 histidinol dehydrogenase compare
ABIE40_RS09425 -4.6 -2.8 peptidylprolyl isomerase compare
ABIE40_RS01970 -4.6 -2.1 acetylglutamate kinase compare
ABIE40_RS02325 -4.5 -2.8 ornithine carbamoyltransferase compare
ABIE40_RS19435 -4.5 -1.5 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10725 -4.5 -2.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS26335 -4.5 -7.3 sigma-54 dependent transcriptional regulator compare
ABIE40_RS03660 -4.5 -3.1 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS03485 -4.5 -12.5 MAPEG family protein compare
ABIE40_RS30700 -4.4 -0.8 hypothetical protein compare
ABIE40_RS20450 -4.4 -2.2 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS18925 -4.4 -3.1 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS16390 -4.4 -0.8 hypothetical protein compare
ABIE40_RS26670 -4.4 -0.8 hypothetical protein compare
ABIE40_RS19460 -4.3 -3.0 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS15690 -4.3 -0.8 DoxX family protein compare
ABIE40_RS02410 -4.3 -0.8 hypothetical protein compare
ABIE40_RS12925 -4.3 -8.7 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS10720 -4.3 -1.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS18970 -4.3 -2.1 murein hydrolase activator EnvC compare
ABIE40_RS14855 -4.3 -2.9 NAD-dependent epimerase compare
ABIE40_RS11105 -4.2 -2.9 cobyrinate a,c-diamide synthase compare
ABIE40_RS11175 -4.1 -2.9 cobyric acid synthase compare
ABIE40_RS20440 -4.1 -1.7 cobalt-precorrin-6A reductase compare
ABIE40_RS28765 -4.1 -1.1 chemotaxis protein CheX compare
ABIE40_RS19440 -4.1 -2.9 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS06930 -4.1 -2.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19330 -4.1 -2.6 phosphoribosylanthranilate isomerase compare
ABIE40_RS09540 -4.1 -6.8 peptidylprolyl isomerase compare
ABIE40_RS26395 -4.1 -1.1 hypothetical protein compare
ABIE40_RS15345 -4.1 -9.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS10035 -4.1 -2.5 DUF3971 domain-containing protein compare
ABIE40_RS20435 -4.1 -2.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS09725 -4.0 -2.5 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS28420 -4.0 -1.3 30S ribosomal protein S21 compare
ABIE40_RS17650 -4.0 -2.8 cobaltochelatase subunit CobS compare
ABIE40_RS16070 -4.0 -2.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS10180 -4.0 -2.8 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS16570 -4.0 -2.1 tetratricopeptide repeat protein compare
ABIE40_RS00930 -4.0 -2.7 ABC transporter permease compare
ABIE40_RS14220 -4.0 -1.0 efflux transporter outer membrane subunit compare
ABIE40_RS11165 -3.9 -1.5 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS26855 -3.9 -1.0 hypothetical protein compare
ABIE40_RS11495 -3.9 -2.7 acetolactate synthase 3 large subunit compare
ABIE40_RS04115 -3.9 -1.3 ribonuclease HI compare
ABIE40_RS09360 -3.9 -2.7 excinuclease ABC subunit UvrA compare
ABIE40_RS14980 -3.9 -2.7 glycoside hydrolase family 16 protein compare
ABIE40_RS02320 -3.9 -2.7 aspartate aminotransferase family protein compare
ABIE40_RS13835 -3.8 -1.2 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
ABIE40_RS03815 -3.8 -1.4 DUF6101 family protein compare
ABIE40_RS01930 -3.8 -1.2 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS19615 -3.8 -1.0 DUF1109 domain-containing protein compare
ABIE40_RS27255 -3.8 -1.2 hypothetical protein compare
ABIE40_RS19450 -3.8 -2.6 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS20455 -3.8 -1.2 precorrin-8X methylmutase compare
ABIE40_RS01860 -3.8 -7.6 RNA polymerase factor sigma-54 compare
ABIE40_RS09170 -3.8 -2.6 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS17595 -3.7 -2.6 histidinol-phosphate transaminase compare
ABIE40_RS11095 -3.7 -2.6 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS13410 -3.7 -4.4 anthranilate synthase compare
ABIE40_RS20430 -3.7 -2.0 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS15745 -3.7 -5.7 Holliday junction branch migration protein RuvA compare
ABIE40_RS19245 -3.7 -3.6 Maf-like protein compare
ABIE40_RS27585 -3.7 -1.0 hypothetical protein compare
ABIE40_RS00725 -3.6 -2.5 DNA cytosine methyltransferase compare
ABIE40_RS15010 -3.6 -9.1 metallophosphoesterase compare
ABIE40_RS18680 -3.6 -0.7 hypothetical protein compare
ABIE40_RS18690 -3.6 -6.0 acetyl-CoA C-acetyltransferase compare
ABIE40_RS20465 -3.6 -2.5 precorrin-6A synthase (deacetylating) compare
ABIE40_RS17560 -3.5 -2.2 cell division ATP-binding protein FtsE compare
ABIE40_RS00935 -3.5 -2.4 ABC transporter substrate-binding protein compare
ABIE40_RS18685 -3.5 -2.8 beta-ketoacyl-ACP reductase compare
ABIE40_RS14985 -3.5 -1.3 glycosyltransferase compare
ABIE40_RS09090 -3.5 -7.3 nitrogen regulation protein NR(I) compare
ABIE40_RS16655 -3.5 -5.8 creatininase family protein compare
ABIE40_RS11155 -3.4 -6.5 cobaltochelatase subunit CobN compare
ABIE40_RS18255 -3.4 -0.9 hypothetical protein compare
ABIE40_RS00620 -3.4 -8.3 microcin C ABC transporter permease YejB compare
ABIE40_RS15920 -3.4 -0.6 50S ribosomal protein L31 compare
ABIE40_RS08970 -3.4 -7.8 citrate synthase compare
ABIE40_RS08005 -3.4 -1.6 dihydroxy-acid dehydratase compare
ABIE40_RS22660 -3.3 -2.2 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS19445 -3.3 -2.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS03405 -3.3 -1.5 anti-sigma factor compare
ABIE40_RS09770 -3.3 -5.0 D-alanyl-D-alanine carboxypeptidase compare
ABIE40_RS12135 -3.3 -2.3 methionine synthase compare
ABIE40_RS11060 -3.2 -4.1 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS19395 -3.2 -2.2 PTS sugar transporter subunit IIA compare
ABIE40_RS17645 -3.2 -2.2 cobaltochelatase subunit CobT compare
ABIE40_RS20445 -3.2 -0.8 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS08140 -3.2 -11.5 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS11150 -3.2 -6.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS13370 -3.2 -7.8 CDF family cation efflux transporter EmfA compare
ABIE40_RS27865 -3.2 -0.8 PepSY domain-containing protein compare
ABIE40_RS10425 -3.2 -5.4 ABC transporter ATP-binding protein compare
ABIE40_RS11570 -3.2 -5.1 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABIE40_RS00625 -3.2 -8.2 ABC transporter permease compare
ABIE40_RS10390 -3.2 -1.3 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS19100 -3.1 -7.0 lytic transglycosylase domain-containing protein compare
ABIE40_RS17575 -3.1 -7.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE40_RS05735 -3.1 -3.2 hypothetical protein compare
ABIE40_RS19480 -3.1 -2.0 DUF1402 family protein compare
ABIE40_RS06720 -3.1 -1.3 transcriptional regulator NrdR compare
ABIE40_RS13195 -3.1 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS19260 -3.1 -1.7 DNA polymerase III subunit epsilon compare
ABIE40_RS06490 -3.1 -1.9 molybdopterin converting factor subunit 1 compare
ABIE40_RS08645 -3.1 -5.6 LL-diaminopimelate aminotransferase compare
ABIE40_RS18880 -3.1 -10.3 UDP-glucose 4-epimerase GalE compare
ABIE40_RS12850 -3.1 -6.3 glycosyltransferase compare
ABIE40_RS19130 -3.1 -4.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS06270 -3.0 -7.4 amidophosphoribosyltransferase compare
ABIE40_RS18640 -3.0 -8.5 M48 family metalloprotease compare
ABIE40_RS26345 -3.0 -9.6 dicarboxylate/amino acid:cation symporter compare
ABIE40_RS18555 -3.0 -6.0 EF-P lysine aminoacylase EpmA compare
ABIE40_RS05430 -3.0 -2.1 phosphoribosylamine--glycine ligase compare
ABIE40_RS08635 -3.0 -10.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS19360 -3.0 -2.1 double-strand break repair helicase AddA compare
ABIE40_RS10850 -3.0 -6.2 excinuclease ABC subunit UvrB compare
ABIE40_RS20545 -2.9 -1.5 YbaK/EbsC family protein compare
ABIE40_RS05665 -2.9 -2.9 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS27770 -2.9 -2.0 hypothetical protein compare
ABIE40_RS19365 -2.9 -1.8 double-strand break repair protein AddB compare
ABIE40_RS15760 -2.9 -4.8 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS17590 -2.8 -1.7 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS07625 -2.8 -2.3 HK97 family phage prohead protease compare
ABIE40_RS06725 -2.7 -4.8 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS08865 -2.7 -6.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS03685 -2.7 -0.8 hypothetical protein compare
ABIE40_RS09720 -2.7 -2.6 GTP cyclohydrolase I FolE compare
ABIE40_RS08980 -2.6 -3.2 transcriptional repressor LexA compare
ABIE40_RS15890 -2.6 -4.3 fructose bisphosphate aldolase compare
ABIE40_RS11910 -2.6 -5.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS00630 -2.6 -4.8 ABC transporter ATP-binding protein compare
ABIE40_RS05455 -2.6 -2.7 tautomerase family protein compare
ABIE40_RS23635 -2.6 -0.6 hypothetical protein compare
ABIE40_RS11605 -2.6 -6.9 AsmA-like C-terminal region-containing protein compare
ABIE40_RS13635 -2.6 -8.9 peptide antibiotic transporter SbmA compare
ABIE40_RS06560 -2.5 -3.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS14955 -2.5 -6.3 sugar transferase compare
ABIE40_RS09140 -2.5 -5.4 siroheme synthase CysG compare
ABIE40_RS05585 -2.5 -2.1 head-tail connector protein compare
ABIE40_RS10580 -2.5 -2.9 DUF971 domain-containing protein compare
ABIE40_RS10200 -2.5 -1.0 Grx4 family monothiol glutaredoxin compare
ABIE40_RS02305 -2.4 -4.2 phosphate signaling complex protein PhoU compare
ABIE40_RS08485 -2.4 -4.0 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
ABIE40_RS09150 -2.4 -7.6 nitrite/sulfite reductase compare
ABIE40_RS09980 -2.4 -1.1 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS17800 -2.4 -2.8 arginase compare
ABIE40_RS19135 -2.4 -5.9 heparinase II/III family protein compare
ABIE40_RS00580 -2.4 -2.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source casamino acids in Rhizobium sp. OAE497

For carbon source casamino acids across organisms