Experiment set1IT083 for Pseudomonas putida KT2440

Compare to:

4-Hydroxyvalerate carbon source (40mM)

Genes with specific phenotypes:

  gene name fitness t score description  
PP_2790 -5.6 -5.5 Sigma-54 dependent sensory box protein compare
PP_2791 -4.0 -5.5 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) compare
PP_4762 -4.0 -6.7 Acyl-CoA thioesterase II compare
PP_4571 -3.5 -7.3 cysteine synthase A compare
PP_3755 -3.4 -6.4 3-hydroxybutyryl-CoA dehydrogenase compare
PP_3754 -3.1 -6.2 Beta-ketothiolase BktB compare
PP_2326 -2.7 -7.9 Universal stress protein compare
PP_3753 -2.5 -6.3 Transcriptional regulator, AraC family compare
PP_2082 -2.5 -11.1 phosphoenolpyruvate synthetase compare
PP_1968 -2.3 -6.9 TetR family transcriptional regulator compare
PP_5210 -2.2 -8.6 Alcohol dehydrogenase, zinc-containing compare
PP_0414 -2.1 -5.5 Polyamine ABC transporter, permease protein compare
PP_2436 -2.1 -6.2 Transcriptional regulator, LysR family compare
PP_1351 -2.0 -8.3 putative 2-dehydropantoate 2-reductase compare
PP_0413 -1.9 -10.5 Polyamine ABC transporter, permease protein compare
PP_3555 -1.6 -5.4 putative Transmembrane sensor compare
PP_3731 -1.4 -6.1 Transcriptional regulator, TetR family compare
PP_5041 -1.2 -7.1 glycogen phosphorylase compare
PP_1695 -1.2 -6.2 putative Sodium-solute symporter/sensory box histidine kinase/response regulator compare
PP_3925 -1.0 -6.1 conserved protein of unknown function compare
PP_0353 +1.5 7.3 Exonuclease compare
PP_4907 +1.6 8.9 Thiosulfate sulfurtransferase compare
PP_1761 +1.7 14.0 diguanylate cyclase with phosphodiesterase domain compare
PP_2797 +1.8 11.5 acetate permease compare
PP_0742 +2.0 13.7 conserved exported protein of unknown function compare
PP_4629 +2.0 8.0 Sensory box protein compare
PP_1236 +2.6 16.2 putative Glycine cleavage system transcriptional repressor compare


Specific phenotypes for carbon source 4-Hydroxyvalerate across organisms