Experiment set1IT083 for Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Compare to:

LB_plus_SM_buffer with FelixO1_phage 0.5 MOI

Genes with specific phenotypes:

  gene name fitness t score description  
GFF1683 -3.0 -5.3 Tyrosine-specific transport protein compare
GFF4253 -1.4 -9.0 Type III restriction-modification system StyLTI enzyme res (EC 3.1.21.5) compare
GFF3404 -1.4 -6.8 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) compare
GFF924 +1.1 5.2 Trehalose operon transcriptional repressor compare
GFF4313 +1.2 5.5 Nucleoside-specific channel-forming protein Tsx precursor compare
GFF4193 +1.3 7.3 FIG01200173: hypothetical protein compare
GFF2556 +1.4 7.1 NAD-dependent malic enzyme (EC 1.1.1.38) compare
GFF4338 +1.4 8.2 Putative transport protein compare
GFF2351 +1.5 7.3 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) compare
GFF1635 +1.5 7.4 Cell wall endopeptidase, family M23/M37 compare
GFF1045 +1.5 8.0 Phosphopentomutase (EC 5.4.2.7) compare
GFF1742 +1.7 6.6 FIG004212: hypothetical protein compare
GFF2279 +1.7 6.3 Copper sensory histidine kinase CpxA compare
GFF1702 +1.7 8.7 Transcriptional regulator, GntR family compare
GFF2993 +1.7 5.1 FIG00731769: possible membrane protein compare
GFF1710 +1.7 10.7 Kup system potassium uptake protein compare
GFF3903 +1.8 6.4 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) compare
GFF3064 +1.9 6.8 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) compare
GFF1633 +2.1 6.5 Pyruvate kinase (EC 2.7.1.40) compare
GFF3148 +2.3 5.4 ADP-ribose pyrophosphatase (EC 3.6.1.13) compare
GFF2648 +2.4 7.8 tRNA(Cytosine32)-2-thiocytidine synthetase compare
GFF1978 +2.4 9.4 Nucleoside permease NupC compare
GFF1408 +2.5 5.4 Chorismate--pyruvate lyase (EC 4.1.3.40) compare
GFF1514 +2.7 10.6 FIG01219785: hypothetical protein compare


Specific phenotypes for phage FelixO1_phage across organisms