Experiment set1IT082 for Bosea sp. OAE506

Compare to:

D-Trehalose dihydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABIE41_RS19555 +2.1 4.1 LexA family transcriptional regulator compare
ABIE41_RS19375 +1.5 4.5 N-acetylmuramidase domain-containing protein compare
ABIE41_RS05410 +1.4 1.1 flagellar motor switch protein FliN compare
ABIE41_RS21900 +1.3 2.5 ABC transporter permease compare
ABIE41_RS11760 +1.3 2.2 rhodanese-like domain-containing protein compare
ABIE41_RS19360 +1.3 4.4 hypothetical protein compare
ABIE41_RS13425 +1.3 3.6 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS22490 +1.3 1.2 ChbG/HpnK family deacetylase compare
ABIE41_RS05535 +1.3 1.5 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS19560 +1.2 4.3 hypothetical protein compare
ABIE41_RS05385 +1.2 1.4 hypothetical protein compare
ABIE41_RS19425 +1.2 7.6 Rha family transcriptional regulator compare
ABIE41_RS14905 +1.2 1.0 type II toxin-antitoxin system VapC family toxin compare
ABIE41_RS11480 +1.2 1.2 outer membrane protein compare
ABIE41_RS19380 +1.1 5.4 DUF4376 domain-containing protein compare
ABIE41_RS05980 +1.1 1.9 uracil-DNA glycosylase compare
ABIE41_RS19430 +1.1 4.3 hypothetical protein compare
ABIE41_RS19480 +1.1 6.4 hypothetical protein compare
ABIE41_RS15475 +1.1 2.3 response regulator compare
ABIE41_RS09615 +1.1 2.0 low affinity iron permease family protein compare
ABIE41_RS13715 +1.1 2.1 nuclear transport factor 2 family protein compare
ABIE41_RS08560 +1.0 1.9 MAPEG family protein compare
ABIE41_RS04860 +1.0 0.9 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS22275 +1.0 2.3 lipid kinase compare
ABIE41_RS19440 +0.9 5.9 hypothetical protein compare
ABIE41_RS21545 +0.9 2.6 trypsin-like serine protease compare
ABIE41_RS08370 +0.9 1.3 metal ABC transporter permease compare
ABIE41_RS19885 +0.9 0.8 LysR substrate-binding domain-containing protein compare
ABIE41_RS09290 +0.9 1.2 DUF465 domain-containing protein compare
ABIE41_RS01505 +0.9 1.2 sulfur oxidation c-type cytochrome SoxX compare
ABIE41_RS20500 +0.9 1.5 GntR family transcriptional regulator compare
ABIE41_RS13295 +0.8 1.2 flagellar assembly protein FliX compare
ABIE41_RS22420 +0.8 0.8 hypothetical protein compare
ABIE41_RS18580 +0.8 1.5 GntR family transcriptional regulator compare
ABIE41_RS11800 +0.8 1.1 YaiI/YqxD family protein compare
ABIE41_RS15355 +0.8 3.3 sulfate ABC transporter permease subunit CysT compare
ABIE41_RS19410 +0.8 3.3 hypothetical protein compare
ABIE41_RS10290 +0.8 1.3 DUF1295 domain-containing protein compare
ABIE41_RS17730 +0.8 1.0 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABIE41_RS06130 +0.8 1.7 hypothetical protein compare
ABIE41_RS19620 +0.8 1.8 hypothetical protein compare
ABIE41_RS08330 +0.8 1.0 N-acetyltransferase compare
ABIE41_RS07875 +0.8 0.8 hypothetical protein compare
ABIE41_RS21750 +0.8 1.5 xanthine dehydrogenase small subunit compare
ABIE41_RS19485 +0.8 2.0 DUF2190 family protein compare
ABIE41_RS22125 +0.8 1.8 ATP phosphoribosyltransferase regulatory subunit compare
ABIE41_RS04865 +0.7 1.0 YkvA family protein compare
ABIE41_RS19340 +0.7 2.0 hypothetical protein compare
ABIE41_RS16615 +0.7 2.4 hydantoinase/oxoprolinase family protein compare
ABIE41_RS10460 +0.7 1.5 aspartate/glutamate racemase family protein compare
ABIE41_RS08030 +0.7 0.8 glutaredoxin 3 compare
ABIE41_RS12495 +0.7 2.2 flavodoxin family protein compare
ABIE41_RS19355 +0.7 3.6 hypothetical protein compare
ABIE41_RS10935 +0.7 1.1 hypothetical protein compare
ABIE41_RS17700 +0.7 1.9 hypothetical protein compare
ABIE41_RS03805 +0.7 0.8 hypothetical protein compare
ABIE41_RS11370 +0.7 2.0 TetR/AcrR family transcriptional regulator compare
ABIE41_RS04330 +0.7 1.6 Hsp33 family molecular chaperone compare
ABIE41_RS00230 +0.7 1.6 alpha-ketoglutarate-dependent dioxygenase AlkB compare
ABIE41_RS15735 +0.7 1.7 SurA N-terminal domain-containing protein compare
ABIE41_RS05310 +0.7 2.7 dienelactone hydrolase family protein compare
ABIE41_RS13710 +0.7 2.1 xanthine dehydrogenase family protein subunit M compare
ABIE41_RS08540 +0.7 3.1 alpha/beta hydrolase compare
ABIE41_RS08550 +0.7 3.8 hypothetical protein compare
ABIE41_RS10080 +0.7 1.2 YeeE/YedE family protein compare
ABIE41_RS13220 +0.7 0.9 TetR/AcrR family transcriptional regulator compare
ABIE41_RS11075 +0.7 1.2 FkbM family methyltransferase compare
ABIE41_RS00795 +0.7 1.0 hypothetical protein compare
ABIE41_RS10810 +0.7 0.9 hypothetical protein compare
ABIE41_RS20270 +0.7 1.3 peroxiredoxin-like family protein compare
ABIE41_RS13410 +0.7 2.6 flagellar basal body-associated protein FliL compare
ABIE41_RS17400 +0.7 2.0 aspartate/glutamate racemase family protein compare
ABIE41_RS12915 +0.6 1.3 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein compare
ABIE41_RS23415 +0.6 0.7 sulfurtransferase TusA family protein compare
ABIE41_RS00560 +0.6 1.0 pilus assembly protein TadG-related protein compare
ABIE41_RS11315 +0.6 1.6 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE41_RS07995 +0.6 1.5 GNAT family N-acetyltransferase compare
ABIE41_RS22180 +0.6 1.6 large conductance mechanosensitive channel protein MscL compare
ABIE41_RS00105 +0.6 1.2 hypothetical protein compare
ABIE41_RS21415 +0.6 2.3 cation diffusion facilitator family transporter compare
ABIE41_RS08475 +0.6 2.6 (2Fe-2S)-binding protein compare
ABIE41_RS16105 +0.6 3.1 hypothetical protein compare
ABIE41_RS22835 +0.6 1.4 GFA family protein compare
ABIE41_RS11840 +0.6 1.6 SemiSWEET transporter compare
ABIE41_RS17055 +0.6 1.3 glutathione S-transferase family protein compare
ABIE41_RS02630 +0.6 3.1 ABC transporter permease compare
ABIE41_RS10665 +0.6 0.9 glucose 1-dehydrogenase compare
ABIE41_RS08915 +0.6 1.7 TIGR03862 family flavoprotein compare
ABIE41_RS12895 +0.6 0.7 aspartate/glutamate racemase family protein compare
ABIE41_RS15565 +0.6 1.4 amino acid synthesis family protein compare
ABIE41_RS15430 +0.6 1.1 mechanosensitive ion channel domain-containing protein compare
ABIE41_RS10020 +0.6 1.3 BCD family MFS transporter compare
ABIE41_RS20810 +0.6 1.2 globin-coupled sensor protein compare
ABIE41_RS10100 +0.6 1.7 transposase compare
ABIE41_RS15015 +0.6 1.4 5'/3'-nucleotidase SurE compare
ABIE41_RS19470 +0.6 1.3 hypothetical protein compare
ABIE41_RS12685 +0.6 1.1 AzlC family ABC transporter permease compare
ABIE41_RS17285 +0.6 1.3 enoyl-CoA hydratase family protein compare
ABIE41_RS12955 +0.6 1.8 HWE histidine kinase domain-containing protein compare
ABIE41_RS01925 +0.6 1.9 hypothetical protein compare
ABIE41_RS15345 +0.6 2.2 sulfate/molybdate ABC transporter ATP-binding protein compare
ABIE41_RS14045 +0.6 1.0 phosphoribosyl-AMP cyclohydrolase compare
ABIE41_RS07485 +0.6 1.7 hypothetical protein compare
ABIE41_RS19415 +0.6 2.1 hypothetical protein compare
ABIE41_RS09490 +0.6 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE41_RS13935 +0.6 1.7 heparan-alpha-glucosaminide N-acetyltransferase compare
ABIE41_RS13965 +0.6 0.5 hypothetical protein compare
ABIE41_RS11985 +0.6 0.9 hypothetical protein compare
ABIE41_RS10875 +0.6 2.8 flagellar basal-body MS-ring/collar protein FliF compare
ABIE41_RS03040 +0.6 4.3 WbqC family protein compare
ABIE41_RS05200 +0.6 0.9 ATP-binding cassette domain-containing protein compare
ABIE41_RS08545 +0.6 2.1 Hsp20 family protein compare
ABIE41_RS19300 +0.6 3.2 polysaccharide biosynthesis/export family protein compare
ABIE41_RS04455 +0.6 2.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE41_RS06365 +0.6 2.0 glutathione S-transferase family protein compare
ABIE41_RS07385 +0.6 1.4 hypothetical protein compare
ABIE41_RS10830 +0.6 2.1 hypothetical protein compare
ABIE41_RS02950 +0.6 3.7 methyltransferase domain-containing protein compare
ABIE41_RS07865 +0.6 1.0 DUF4337 domain-containing protein compare
ABIE41_RS13950 +0.6 1.4 LysR family transcriptional regulator compare
ABIE41_RS15905 +0.5 0.7 OsmC family protein compare
ABIE41_RS21635 +0.5 1.4 ABC transporter permease subunit compare
ABIE41_RS07570 +0.5 1.4 ribosome silencing factor compare
ABIE41_RS08090 +0.5 1.7 LysR family transcriptional regulator compare
ABIE41_RS12900 +0.5 1.4 glutathione S-transferase family protein compare
ABIE41_RS00260 +0.5 2.0 DUF2306 domain-containing protein compare
ABIE41_RS10285 +0.5 1.2 ChrR family anti-sigma-E factor compare
ABIE41_RS16955 +0.5 2.1 PhzF family phenazine biosynthesis protein compare
ABIE41_RS18680 +0.5 1.8 GntR family transcriptional regulator compare
ABIE41_RS23740 +0.5 2.7 ABC transporter permease compare
ABIE41_RS01465 +0.5 2.3 iron ABC transporter permease compare
ABIE41_RS00940 +0.5 2.1 DUF4142 domain-containing protein compare
ABIE41_RS03120 +0.5 0.7 hypothetical protein compare
ABIE41_RS09610 +0.5 1.4 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS16765 +0.5 1.2 GTPase HflX compare
ABIE41_RS03555 +0.5 2.4 hypothetical protein compare
ABIE41_RS12070 +0.5 1.4 methyl-accepting chemotaxis protein compare
ABIE41_RS14510 +0.5 1.3 LysR family transcriptional regulator compare
ABIE41_RS00635 +0.5 0.8 hypothetical protein compare
ABIE41_RS14425 +0.5 0.8 hypothetical protein compare
ABIE41_RS10915 +0.5 2.7 flagellar biosynthesis protein FlhA compare
ABIE41_RS14055 +0.5 1.2 SDR family oxidoreductase compare
ABIE41_RS23565 +0.5 1.0 helix-turn-helix domain-containing protein compare
ABIE41_RS22145 +0.5 1.6 GIY-YIG nuclease family protein compare
ABIE41_RS11020 +0.5 1.5 hypothetical protein compare
ABIE41_RS17085 +0.5 0.9 DUF2147 domain-containing protein compare
ABIE41_RS03585 +0.5 1.1 cold-shock protein compare
ABIE41_RS10930 +0.5 1.3 DUF305 domain-containing protein compare
ABIE41_RS08620 +0.5 1.9 DUF29 domain-containing protein compare
ABIE41_RS07245 +0.5 1.7 class I SAM-dependent methyltransferase compare
ABIE41_RS23570 +0.5 0.9 zinc-binding alcohol dehydrogenase family protein compare
ABIE41_RS01680 +0.5 1.7 methyl-accepting chemotaxis protein compare
ABIE41_RS00820 +0.5 0.9 DUF1232 domain-containing protein compare
ABIE41_RS02620 +0.5 4.0 peptide ABC transporter substrate-binding protein compare
ABIE41_RS16870 +0.5 1.8 hypothetical protein compare
ABIE41_RS23345 +0.5 1.0 gephyrin-like molybdotransferase Glp compare
ABIE41_RS16570 +0.5 1.5 tripartite tricarboxylate transporter substrate binding protein compare
ABIE41_RS19230 +0.5 1.9 substrate-binding domain-containing protein compare
ABIE41_RS13405 +0.5 2.1 flagellar motor switch protein FliM compare
ABIE41_RS18705 +0.5 1.6 amidohydrolase family protein compare
ABIE41_RS01180 +0.5 1.5 TRAP transporter substrate-binding protein compare
ABIE41_RS21385 +0.5 1.8 urease subunit alpha compare
ABIE41_RS13375 +0.5 1.4 flagellar basal body rod protein FlgB compare
ABIE41_RS23035 +0.5 1.2 YqhA family protein compare
ABIE41_RS04215 +0.5 1.4 2-polyprenylphenol 6-hydroxylase compare
ABIE41_RS08530 +0.5 2.4 N-formylglutamate amidohydrolase compare
ABIE41_RS12880 +0.5 0.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABIE41_RS13350 +0.5 2.2 flagellar biosynthesis protein FlhB compare
ABIE41_RS05305 +0.5 1.6 M48 family metalloprotease compare
ABIE41_RS03500 +0.5 1.2 helix-turn-helix transcriptional regulator compare
ABIE41_RS06595 +0.5 1.3 DUF3606 domain-containing protein compare
ABIE41_RS05225 +0.5 0.7 phosphoribosyl-ATP diphosphatase compare
ABIE41_RS22995 +0.5 2.9 GNAT family protein compare
ABIE41_RS19215 +0.5 2.1 SDR family oxidoreductase compare
ABIE41_RS03395 +0.5 1.4 esterase-like activity of phytase family protein compare
ABIE41_RS05325 +0.5 0.4 RNA-binding S4 domain-containing protein compare
ABIE41_RS12205 +0.5 1.4 ABC transporter ATP-binding protein compare
ABIE41_RS02795 +0.5 2.6 ABC transporter permease compare
ABIE41_RS02635 +0.5 3.1 ABC transporter ATP-binding protein compare
ABIE41_RS20450 +0.5 2.5 haloacid dehalogenase type II compare
ABIE41_RS15580 +0.5 1.9 Cu(I)-responsive transcriptional regulator compare
ABIE41_RS08730 +0.5 2.3 EamA family transporter compare
ABIE41_RS17665 +0.5 2.3 methyl-accepting chemotaxis protein compare
ABIE41_RS03045 +0.5 3.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
ABIE41_RS23195 +0.5 1.3 DUF882 domain-containing protein compare
ABIE41_RS18365 +0.5 1.5 ABC transporter permease compare
ABIE41_RS13690 +0.5 1.9 carbon monoxide dehydrogenase subunit G compare
ABIE41_RS12400 +0.5 1.9 energy-dependent translational throttle protein EttA compare
ABIE41_RS02975 +0.5 3.5 hypothetical protein compare
ABIE41_RS13140 +0.5 2.1 TRAP transporter small permease compare
ABIE41_RS22455 +0.5 0.6 DUF6456 domain-containing protein compare
ABIE41_RS22405 +0.5 2.6 DUF1214 domain-containing protein compare
ABIE41_RS02260 +0.5 2.0 DMT family transporter compare
ABIE41_RS21930 +0.5 1.0 creatininase family protein compare
ABIE41_RS03800 +0.5 1.3 carbonic anhydrase compare
ABIE41_RS22355 +0.5 1.2 hypothetical protein compare
ABIE41_RS21365 +0.5 2.0 urease accessory protein UreE compare
ABIE41_RS03515 +0.5 2.2 methionine ABC transporter permease compare
ABIE41_RS23445 +0.5 1.4 DUF2478 domain-containing protein compare
ABIE41_RS00060 +0.5 0.5 type II toxin-antitoxin system VapC family toxin compare


Specific Phenotypes

None in this experiment

For Bosea sp. OAE506 in carbon source experiments

For carbon source D-Trehalose dihydrate across organisms