Experiment set1IT081 for Rhizobium sp. OAE497

Compare to:

Gelatin carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18590 -6.9 -6.7 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.8 -6.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18380 -6.4 -9.7 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS13330 -6.2 -7.4 2-isopropylmalate synthase compare
ABIE40_RS17525 -6.2 -3.6 lipoprotein compare
ABIE40_RS00245 -6.2 -9.4 prephenate dehydratase compare
ABIE40_RS11950 -6.0 -8.2 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS19040 -6.0 -5.8 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS19050 -6.0 -9.9 3-isopropylmalate dehydrogenase compare
ABIE40_RS09095 -5.9 -4.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.7 -3.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS18775 -5.7 -15.2 pyruvate carboxylase compare
ABIE40_RS09545 -5.6 -3.8 anthranilate phosphoribosyltransferase compare
ABIE40_RS21380 -5.4 -14.0 AraC family transcriptional regulator compare
ABIE40_RS03665 -5.4 -3.7 ATP phosphoribosyltransferase compare
ABIE40_RS08635 -5.3 -7.3 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS02725 -5.3 -3.7 histidinol dehydrogenase compare
ABIE40_RS01970 -5.3 -3.6 acetylglutamate kinase compare
ABIE40_RS10725 -5.3 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS09150 -5.3 -17.7 nitrite/sulfite reductase compare
ABIE40_RS17530 -5.2 -6.2 diaminopimelate decarboxylase compare
ABIE40_RS02325 -5.2 -3.6 ornithine carbamoyltransferase compare
ABIE40_RS19435 -5.2 -3.0 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS16815 -5.1 -14.6 xylulokinase compare
ABIE40_RS16320 -5.1 -6.0 histidinol-phosphatase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS06730 -5.0 -6.0 riboflavin synthase compare
ABIE40_RS10720 -5.0 -3.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS09155 -5.0 -5.9 DUF934 domain-containing protein compare
ABIE40_RS21360 -5.0 -14.3 NAD(P)-dependent alcohol dehydrogenase compare
ABIE40_RS19460 -5.0 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11105 -5.0 -3.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS03660 -4.9 -4.8 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS21375 -4.9 -20.5 sugar ABC transporter substrate-binding protein compare
ABIE40_RS11175 -4.9 -3.4 cobyric acid synthase compare
ABIE40_RS09725 -4.9 -3.4 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS06930 -4.9 -3.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS11150 -4.8 -8.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS10180 -4.8 -3.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS19440 -4.8 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.8 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS21370 -4.7 -17.5 sugar ABC transporter permease compare
ABIE40_RS13410 -4.7 -3.3 anthranilate synthase compare
ABIE40_RS09660 -4.7 -15.6 AI-2E family transporter compare
ABIE40_RS11165 -4.7 -3.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS09360 -4.7 -3.2 excinuclease ABC subunit UvrA compare
ABIE40_RS06560 -4.6 -4.5 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS16070 -4.6 -3.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS01930 -4.5 -2.6 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS18920 -4.5 -5.4 glutamate 5-kinase compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS17650 -4.5 -4.3 cobaltochelatase subunit CobS compare
ABIE40_RS11095 -4.5 -3.1 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS17595 -4.5 -3.1 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.4 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS18925 -4.4 -6.0 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS00725 -4.3 -3.0 DNA cytosine methyltransferase compare
ABIE40_RS06270 -4.3 -7.8 amidophosphoribosyltransferase compare
ABIE40_RS11155 -4.3 -4.2 cobaltochelatase subunit CobN compare
ABIE40_RS19130 -4.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS11495 -4.2 -5.7 acetolactate synthase 3 large subunit compare
ABIE40_RS02320 -4.1 -4.9 aspartate aminotransferase family protein compare
ABIE40_RS20455 -4.1 -2.4 precorrin-8X methylmutase compare
ABIE40_RS19355 -4.1 -4.0 thioredoxin compare
ABIE40_RS20450 -4.1 -4.0 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS08005 -4.1 -2.8 dihydroxy-acid dehydratase compare
ABIE40_RS21365 -4.0 -12.3 carbohydrate ABC transporter permease compare
ABIE40_RS03405 -4.0 -2.8 anti-sigma factor compare
ABIE40_RS12135 -4.0 -2.8 methionine synthase compare
ABIE40_RS19445 -4.0 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS03190 -3.8 -4.5 phosphogluconate dehydratase compare
ABIE40_RS09090 -3.8 -8.7 nitrogen regulation protein NR(I) compare
ABIE40_RS19480 -3.8 -2.6 DUF1402 family protein compare
ABIE40_RS14980 -3.8 -5.1 glycoside hydrolase family 16 protein compare
ABIE40_RS17645 -3.7 -3.6 cobaltochelatase subunit CobT compare
ABIE40_RS05430 -3.7 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS10345 -3.6 -6.5 RNA polymerase-binding protein DksA compare
ABIE40_RS16655 -3.6 -8.9 creatininase family protein compare
ABIE40_RS14990 -3.5 -12.0 glycosyltransferase family 2 protein compare
ABIE40_RS15920 -3.5 -1.2 50S ribosomal protein L31 compare
ABIE40_RS05155 -3.5 -6.2 DUF5330 domain-containing protein compare
ABIE40_RS20430 -3.5 -3.4 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS12925 -3.5 -12.4 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS08645 -3.5 -7.3 LL-diaminopimelate aminotransferase compare
ABIE40_RS09140 -3.2 -8.5 siroheme synthase CysG compare
ABIE40_RS17590 -3.2 -3.1 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS15345 -3.1 -10.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS20445 -3.1 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS00580 -3.1 -3.4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS05660 -3.1 -4.3 response regulator transcription factor compare
ABIE40_RS06050 -3.0 -6.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS06725 -3.0 -5.4 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS00935 -3.0 -6.8 ABC transporter substrate-binding protein compare
ABIE40_RS10390 -2.9 -3.1 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS21355 -2.9 -10.7 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
ABIE40_RS10155 -2.9 -2.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS18055 -2.8 -4.6 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS00930 -2.7 -8.1 ABC transporter permease compare
ABIE40_RS14955 -2.6 -10.8 sugar transferase compare
ABIE40_RS12360 -2.6 -11.9 DUF5131 family protein compare
ABIE40_RS11060 -2.5 -5.1 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS09720 -2.5 -4.6 GTP cyclohydrolase I FolE compare
ABIE40_RS18880 -2.4 -12.1 UDP-glucose 4-epimerase GalE compare
ABIE40_RS01765 -2.4 -6.0 [protein-PII] uridylyltransferase compare
ABIE40_RS19365 -2.3 -3.7 double-strand break repair protein AddB compare
ABIE40_RS19260 -2.3 -3.0 DNA polymerase III subunit epsilon compare
ABIE40_RS12115 -2.3 -3.0 GntR family transcriptional regulator compare
ABIE40_RS12845 -2.2 -2.6 glycosyltransferase family 4 protein compare
ABIE40_RS14985 -2.2 -2.3 glycosyltransferase compare
ABIE40_RS01135 -2.1 -1.0 50S ribosomal protein L20 compare
ABIE40_RS09980 -2.1 -2.8 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS04465 -2.1 -12.6 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS20635 -2.1 -2.9 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS08140 -2.1 -11.9 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS19700 -2.0 -3.6 MBL fold metallo-hydrolase compare
ABIE40_RS06645 -2.0 -2.4 hypothetical protein compare
ABIE40_RS19395 -1.9 -2.9 PTS sugar transporter subunit IIA compare
ABIE40_RS22100 -1.9 -1.6 helix-turn-helix domain-containing protein compare
ABIE40_RS04505 -1.9 -1.6 YlcI/YnfO family protein compare
ABIE40_RS07740 -1.9 -1.4 elongation factor Tu compare
ABIE40_RS04475 -1.9 -9.1 phosphoadenylyl-sulfate reductase compare
ABIE40_RS23670 -1.8 -2.3 hypothetical protein compare
ABIE40_RS22300 -1.8 -4.8 superoxide dismutase compare
ABIE40_RS04470 -1.8 -10.8 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS18640 -1.8 -8.6 M48 family metalloprotease compare
ABIE40_RS06700 -1.7 -4.1 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS19360 -1.7 -3.7 double-strand break repair helicase AddA compare
ABIE40_RS15690 -1.7 -1.1 DoxX family protein compare
ABIE40_RS00490 -1.7 -8.5 DNA polymerase I compare
ABIE40_RS09145 -1.7 -3.9 DUF2849 domain-containing protein compare
ABIE40_RS09540 -1.6 -4.0 peptidylprolyl isomerase compare
ABIE40_RS25500 -1.6 -1.2 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS18685 -1.6 -3.9 beta-ketoacyl-ACP reductase compare
ABIE40_RS27930 -1.6 -0.9 nuclear transport factor 2 family protein compare
ABIE40_RS08970 -1.6 -6.6 citrate synthase compare
ABIE40_RS08935 -1.5 -2.9 RIP metalloprotease RseP compare
ABIE40_RS05670 -1.5 -5.0 membrane protein compare
ABIE40_RS11960 -1.5 -2.2 energy-dependent translational throttle protein EttA compare
ABIE40_RS07105 -1.5 -2.6 DNA-binding protein HupB compare
ABIE40_RS02405 -1.5 -2.6 response regulator transcription factor compare
ABIE40_RS01055 -1.4 -5.1 translation elongation factor 4 compare
ABIE40_RS19375 -1.4 -4.0 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS10140 -1.4 -2.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS00625 -1.4 -7.4 ABC transporter permease compare
ABIE40_RS30895 -1.4 -1.2 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS16210 -1.4 -5.9 homospermidine synthase compare
ABIE40_RS11065 -1.4 -3.3 zinc-binding dehydrogenase compare
ABIE40_RS30285 -1.4 -0.8 co-chaperone GroES compare
ABIE40_RS15650 -1.4 -5.7 TIGR00282 family metallophosphoesterase compare
ABIE40_RS00925 -1.4 -3.2 ABC transporter permease compare
ABIE40_RS11085 -1.4 -2.3 acyl carrier protein compare
ABIE40_RS07335 -1.4 -1.4 50S ribosomal protein L33 compare
ABIE40_RS28815 -1.4 -4.1 GNAT family N-acetyltransferase compare
ABIE40_RS24495 -1.4 -2.7 flavin reductase compare
ABIE40_RS16570 -1.3 -2.1 tetratricopeptide repeat protein compare
ABIE40_RS03485 -1.3 -9.3 MAPEG family protein compare
ABIE40_RS13370 -1.3 -7.9 CDF family cation efflux transporter EmfA compare
ABIE40_RS22660 -1.3 -2.8 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS15010 -1.3 -6.0 metallophosphoesterase compare
ABIE40_RS30315 -1.3 -1.2 hypothetical protein compare
ABIE40_RS08600 -1.3 -5.0 trigger factor compare
ABIE40_RS10035 -1.3 -2.4 DUF3971 domain-containing protein compare
ABIE40_RS04215 -1.3 -2.4 sensor domain-containing phosphodiesterase compare
ABIE40_RS10425 -1.3 -4.6 ABC transporter ATP-binding protein compare
ABIE40_RS11490 -1.3 -4.3 acetolactate synthase small subunit compare
ABIE40_RS05025 -1.3 -2.7 MucR family transcriptional regulator compare
ABIE40_RS04070 -1.3 -4.5 heme o synthase compare
ABIE40_RS03815 -1.3 -1.3 DUF6101 family protein compare
ABIE40_RS27155 -1.2 -2.1 acetyltransferase compare
ABIE40_RS14940 -1.2 -9.5 acyltransferase compare
ABIE40_RS28065 -1.2 -1.5 hypothetical protein compare
ABIE40_RS10200 -1.2 -1.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS19645 -1.2 -7.0 acyltransferase compare
ABIE40_RS00450 -1.2 -3.8 molecular chaperone DnaJ compare
ABIE40_RS08865 -1.2 -5.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS09085 -1.2 -4.0 nitrogen regulation protein NR(II) compare
ABIE40_RS10850 -1.2 -3.3 excinuclease ABC subunit UvrB compare
ABIE40_RS00620 -1.2 -6.0 microcin C ABC transporter permease YejB compare
ABIE40_RS18615 -1.2 -2.3 MarR family transcriptional regulator compare
ABIE40_RS17565 -1.2 -2.0 ABC transporter permease compare
ABIE40_RS01355 -1.2 -5.8 phospholipid N-methyltransferase PmtA compare
ABIE40_RS08425 -1.2 -1.8 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS09170 -1.2 -4.0 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS12230 -1.2 -1.1 carboxymuconolactone decarboxylase family protein compare
ABIE40_RS08980 -1.1 -3.5 transcriptional repressor LexA compare
ABIE40_RS15590 -1.1 -2.0 tol-pal system protein YbgF compare
ABIE40_RS24310 -1.1 -6.0 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS19100 -1.1 -6.7 lytic transglycosylase domain-containing protein compare
ABIE40_RS15670 -1.1 -4.2 anti-sigma factor compare
ABIE40_RS18125 -1.1 -4.8 translational GTPase TypA compare
ABIE40_RS18290 -1.1 -5.9 heme ABC transporter permease compare
ABIE40_RS20905 -1.1 -4.2 IclR family transcriptional regulator compare
ABIE40_RS14855 -1.1 -3.9 NAD-dependent epimerase compare
ABIE40_RS19385 -1.1 -4.0 adenosylhomocysteinase compare
ABIE40_RS14220 -1.1 -1.2 efflux transporter outer membrane subunit compare
ABIE40_RS14455 -1.1 -1.9 NepR family anti-sigma factor compare
ABIE40_RS22200 -1.1 -1.2 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS24995 -1.1 -1.5 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For carbon source Gelatin in Rhizobium sp. OAE497

For carbon source Gelatin across organisms