Experiment set1IT081 for Serratia liquefaciens MT49

Compare to:

Potassium dichromate 20 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI46_24465 +1.3 5.6 HTH-type transcriptional repressor FabR compare
IAI46_19765 +1.3 2.9 hypothetical protein compare
IAI46_23685 +1.1 2.9 ribulose-phosphate 3-epimerase compare
IAI46_12615 +1.0 2.9 hypothetical protein compare
IAI46_01120 +1.0 5.3 NAD(P)H-flavin reductase compare
IAI46_11795 +1.0 2.5 xanthine dehydrogenase accessory protein XdhC compare
IAI46_13235 +0.9 2.8 tagatose bisphosphate family class II aldolase compare
IAI46_17705 +0.9 3.7 NADH-quinone oxidoreductase subunit B compare
IAI46_14385 +0.9 1.4 GNAT family N-acetyltransferase compare
IAI46_15250 +0.8 1.7 hypothetical protein compare
IAI46_08810 +0.8 2.4 cell division protein ZapC compare
IAI46_12915 +0.8 2.1 DUF1428 family protein compare
IAI46_17670 +0.8 2.5 NADH-quinone oxidoreductase subunit J compare
IAI46_15950 +0.8 2.4 flagellar hook assembly protein FlgD compare
IAI46_09130 +0.8 2.0 universal stress protein compare
IAI46_12665 +0.8 2.1 aldehyde dehydrogenase family protein compare
IAI46_16835 +0.8 1.8 DUF2623 family protein compare
IAI46_12560 +0.7 2.2 hydrogenase formation protein HypD compare
IAI46_15100 +0.7 2.7 hypothetical protein compare
IAI46_10455 +0.7 2.2 23S rRNA pseudouridine(2457) synthase RluE compare
IAI46_17700 +0.7 3.6 NADH-quinone oxidoreductase subunit C/D compare
IAI46_12195 +0.7 1.4 CopG family transcriptional regulator compare
IAI46_06270 +0.7 3.0 succinate dehydrogenase iron-sulfur subunit compare
IAI46_15965 +0.7 3.0 flagellar basal body P-ring formation protein FlgA compare
IAI46_22545 +0.7 3.4 glycine-rich SFCGS family protein compare
IAI46_12330 +0.7 1.9 GNAT family N-acetyltransferase compare
IAI46_09635 +0.7 2.0 helix-turn-helix transcriptional regulator compare
IAI46_04965 +0.7 4.1 protoheme IX farnesyltransferase compare
IAI46_04980 +0.7 5.3 cytochrome o ubiquinol oxidase subunit I compare
IAI46_10215 +0.7 1.8 helix-turn-helix transcriptional regulator compare
IAI46_09745 +0.6 1.3 antibiotic biosynthesis monooxygenase compare
IAI46_03890 +0.6 2.0 DedA family protein compare
IAI46_13120 +0.6 1.4 helix-turn-helix transcriptional regulator compare
IAI46_12310 +0.6 1.3 alcohol dehydrogenase AdhP compare
IAI46_13620 +0.6 1.9 hypothetical protein compare
IAI46_22410 +0.6 1.7 lipid asymmetry maintenance protein MlaB compare
IAI46_04970 +0.6 2.0 cytochrome o ubiquinol oxidase subunit IV compare
IAI46_04985 +0.6 3.6 cytochrome o ubiquinol oxidase subunit II compare
IAI46_02165 +0.6 1.8 colicin-D compare
IAI46_02410 +0.6 1.5 hypothetical protein compare
IAI46_08195 +0.6 2.6 imidazole glycerol phosphate synthase subunit HisH compare
IAI46_11840 +0.6 1.9 (2Fe-2S)-binding protein compare
IAI46_09135 +0.6 2.3 Ldh family oxidoreductase compare
IAI46_19615 +0.6 2.3 autonomous glycyl radical cofactor GrcA compare
IAI46_12130 +0.6 1.9 VOC family protein compare
IAI46_14600 +0.6 3.9 murein DD-endopeptidase MepM compare
IAI46_06255 +0.6 2.0 succinate dehydrogenase cytochrome b556 subunit compare
IAI46_12880 +0.6 2.3 MFS transporter compare
IAI46_13435 +0.6 2.0 hypothetical protein compare
IAI46_09570 +0.6 1.3 hypothetical protein compare
IAI46_06650 +0.6 2.4 tRNA dihydrouridine(16) synthase DusC compare
IAI46_14030 +0.6 1.9 anthranilate phosphoribosyltransferase compare
IAI46_04975 +0.6 2.8 cytochrome o ubiquinol oxidase subunit III compare
IAI46_16105 +0.6 2.4 4-hydroxy-2-oxovalerate aldolase compare
IAI46_10255 +0.6 1.6 stress-induced protein YchH compare
IAI46_16435 +0.6 0.8 RidA family protein compare
IAI46_15220 +0.6 2.1 hypothetical protein compare
IAI46_02415 +0.6 1.4 hypothetical protein compare
IAI46_05320 +0.6 1.7 NfeD family protein compare
IAI46_18530 +0.6 2.8 YgiW/YdeI family stress tolerance OB fold protein compare
IAI46_12610 +0.5 1.8 alpha/beta hydrolase compare
IAI46_11475 +0.5 1.7 helix-turn-helix domain-containing protein compare
IAI46_12995 +0.5 1.7 hypothetical protein compare
IAI46_06735 +0.5 2.2 LuxR family transcriptional regulator compare
IAI46_24150 +0.5 1.2 inorganic phosphate transporter PitA compare
IAI46_02395 +0.5 2.9 restriction endonuclease subunit S compare
IAI46_08080 +0.5 3.2 undecaprenyl-phosphate glucose phosphotransferase compare
IAI46_09375 +0.5 0.9 TraR/DksA family transcriptional regulator compare
IAI46_05720 +0.5 1.3 DoxX family protein compare
IAI46_10725 +0.5 1.2 ASCH domain-containing protein compare
IAI46_22310 +0.5 2.3 DnaA initiator-associating protein DiaA compare
IAI46_15290 +0.5 0.8 hypothetical protein compare
IAI46_09995 +0.5 1.6 DNA polymerase III subunit theta compare
IAI46_18170 +0.5 2.2 membrane protein YpdK compare
IAI46_00605 +0.5 1.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
IAI46_19875 +0.5 1.6 acid resistance repetitive basic protein Asr compare
IAI46_25120 +0.5 1.8 F0F1 ATP synthase subunit I compare
IAI46_08895 +0.5 2.0 YccF domain-containing protein compare
IAI46_11775 +0.5 1.5 ROK family transcriptional regulator compare
IAI46_18550 +0.5 0.8 YaiI/YqxD family protein compare
IAI46_11470 +0.5 2.0 electron transport complex subunit RsxD compare
IAI46_10450 +0.5 2.0 hypothetical protein compare
IAI46_10435 +0.5 1.2 high frequency lysogenization protein HflD compare
IAI46_10500 +0.5 1.3 hypothetical protein compare
IAI46_18500 +0.5 3.1 sulfate/thiosulfate ABC transporter permease CysW compare
IAI46_14225 +0.5 1.7 thymidine kinase compare
IAI46_14940 +0.5 1.4 hypothetical protein compare
IAI46_09165 +0.5 1.6 FAD-dependent oxidoreductase compare
IAI46_01520 +0.5 0.7 entericidin A/B family lipoprotein compare
IAI46_16865 +0.5 1.9 sugar glycosyltransferase compare
IAI46_01910 +0.5 1.0 preprotein translocase subunit SecG compare
IAI46_08530 +0.5 1.4 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI46_18870 +0.5 1.9 GlsB/YeaQ/YmgE family stress response membrane protein compare
IAI46_05540 +0.5 1.4 type VI secretion system tube protein Hcp compare
IAI46_14930 +0.5 1.2 peptidoglycan-binding protein LysM compare
IAI46_13405 +0.5 2.0 Cu(I)-responsive transcriptional regulator compare
IAI46_12645 +0.5 1.0 DUF2946 domain-containing protein compare
IAI46_05455 +0.5 1.9 GNAT family N-acetyltransferase compare
IAI46_12980 +0.5 1.9 ABC-F family ATP-binding cassette domain-containing protein compare
IAI46_23285 +0.5 2.7 large-conductance mechanosensitive channel protein MscL compare
IAI46_13155 +0.5 2.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
IAI46_23025 +0.5 2.0 chorismate lyase compare
IAI46_12245 +0.5 1.8 TIM barrel protein compare
IAI46_06885 +0.5 1.0 GNAT family N-acetyltransferase compare
IAI46_17780 +0.5 2.0 TIGR01777 family protein compare
IAI46_14005 +0.5 1.8 hypothetical protein compare
IAI46_13850 +0.5 2.0 serine-type D-Ala-D-Ala carboxypeptidase DacD compare
IAI46_19835 +0.5 2.0 MbeD/MobD like protein compare
IAI46_20660 +0.5 0.6 chaperone modulator CbpM compare
IAI46_19140 +0.5 2.6 type II toxin-antitoxin system RelE/ParE family toxin compare
IAI46_13555 +0.5 1.6 LysR family transcriptional regulator compare
IAI46_22315 +0.5 2.0 divisome-associated lipoprotein YraP compare
IAI46_21570 +0.5 2.9 helix-turn-helix transcriptional regulator compare
IAI46_14125 +0.4 1.4 TetR/AcrR family transcriptional regulator compare
IAI46_16870 +0.4 1.6 alkylhydroperoxidase domain protein compare
IAI46_11920 +0.4 1.6 chromate transporter compare
IAI46_22855 +0.4 1.0 DUF1471 domain-containing protein compare
IAI46_03600 +0.4 3.8 GTP diphosphokinase compare
IAI46_12095 +0.4 2.0 LLM class flavin-dependent oxidoreductase compare
IAI46_01780 +0.4 2.3 gamma-glutamylcyclotransferase compare
IAI46_13575 +0.4 2.0 C40 family peptidase compare
IAI46_18900 +0.4 1.8 phosphate ABC transporter ATP-binding protein compare
IAI46_16170 +0.4 1.0 3-oxoadipate enol-lactonase compare
IAI46_14680 +0.4 1.0 hypothetical protein compare
IAI46_19870 +0.4 1.9 DUF4440 domain-containing protein compare
IAI46_12380 +0.4 1.1 carboxymuconolactone decarboxylase family protein compare
IAI46_09580 +0.4 1.5 hypothetical protein compare
IAI46_05760 +0.4 0.9 RidA family protein compare
IAI46_04960 +0.4 2.9 MFS transporter compare
IAI46_16240 +0.4 1.3 LysR family transcriptional regulator compare
IAI46_08985 +0.4 2.8 potassium transporter TrkG compare
IAI46_12925 +0.4 2.2 alpha-glucosidase compare
IAI46_11170 +0.4 1.4 cysteine desulfuration protein SufE compare
IAI46_14870 +0.4 0.9 DUF4060 family protein compare
IAI46_18810 +0.4 1.7 TOBE domain-containing protein compare
IAI46_10235 +0.4 1.9 dihydrofolate reductase compare
IAI46_00955 +0.4 1.9 aspartate 1-decarboxylase autocleavage activator PanM compare
IAI46_14655 +0.4 1.3 hydrolase compare
IAI46_18005 +0.4 1.2 YfcL family protein compare
IAI46_14245 +0.4 1.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
IAI46_09195 +0.4 2.1 GlpM family protein compare
IAI46_13230 +0.4 1.0 SIS domain-containing protein compare
IAI46_12300 +0.4 1.7 ABC transporter ATP-binding protein compare
IAI46_09865 +0.4 2.2 SDR family oxidoreductase compare
IAI46_17690 +0.4 1.5 NADH-quinone oxidoreductase subunit NuoF compare
IAI46_06150 +0.4 0.6 helix-turn-helix transcriptional regulator compare
IAI46_11810 +0.4 1.1 isochorismatase family protein compare
IAI46_06640 +0.4 2.1 universal stress protein compare
IAI46_16840 +0.4 2.1 nitroreductase family protein compare
IAI46_05515 +0.4 1.1 fimbrial protein compare
IAI46_15395 +0.4 1.8 ABC transporter permease compare
IAI46_08990 +0.4 1.9 hypothetical protein compare
IAI46_05695 +0.4 1.6 toxin compare
IAI46_05220 +0.4 1.8 DUF454 family protein compare
IAI46_14425 +0.4 1.8 ABC transporter ATP-binding protein compare
IAI46_05870 +0.4 1.5 transcription antiterminator/RNA stability regulator CspE compare
IAI46_10680 +0.4 1.7 DUF917 domain-containing protein compare
IAI46_08200 +0.4 2.2 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB compare
IAI46_05705 +0.4 0.9 hypothetical protein compare
IAI46_19515 +0.4 2.1 MurR/RpiR family transcriptional regulator compare
IAI46_12375 +0.4 1.5 alpha/beta fold hydrolase compare
IAI46_11140 +0.4 1.4 hypothetical protein compare
IAI46_07550 +0.4 1.1 adenylate kinase compare
IAI46_18495 +0.4 1.9 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI46_16990 +0.4 1.5 citrate lyase subunit alpha compare
IAI46_13515 +0.4 0.9 carbonate dehydratase compare
IAI46_09120 +0.4 1.9 3-hydroxybutyryl-CoA dehydrogenase compare
IAI46_09555 +0.4 1.3 hypothetical protein compare
IAI46_10475 +0.4 2.1 MFS transporter compare
IAI46_09145 +0.4 0.8 aldehyde dehydrogenase (NADP(+)) compare
IAI46_14335 +0.4 1.8 bifunctional nicotinamidase/pyrazinamidase compare
IAI46_10695 +0.4 2.0 Zn-dependent hydrolase compare
IAI46_09965 +0.4 1.7 molecular chaperone compare
IAI46_11675 +0.4 1.9 MFS transporter compare
IAI46_19690 +0.4 1.9 AlpA family transcriptional regulator compare
IAI46_10395 +0.4 0.8 two-component system response regulator PhoP compare
IAI46_12390 +0.4 0.9 heavy metal response regulator transcription factor compare
IAI46_13105 +0.4 1.9 branched-chain amino acid ABC transporter substrate-binding protein compare
IAI46_09425 +0.4 1.1 hypothetical protein compare
IAI46_00615 +0.4 1.4 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI46_23835 +0.4 1.3 Fe-S biogenesis protein NfuA compare
IAI46_10600 +0.4 1.5 beta-lactamase family protein compare
IAI46_06965 +0.4 1.2 ABC transporter ATP-binding protein compare
IAI46_04040 +0.4 1.5 acyl carrier protein compare
IAI46_00895 +0.4 2.1 hypothetical protein compare
IAI46_00555 +0.4 3.0 insulinase family protein compare
IAI46_06610 +0.4 2.0 secretion protein HlyD compare
IAI46_10330 +0.4 1.5 PAS domain-containing protein compare
IAI46_23510 +0.4 1.4 YheV family putative metal-binding protein compare
IAI46_09880 +0.4 1.6 purine nucleoside phosphoramidase compare
IAI46_02465 +0.4 2.2 carbonic anhydrase compare
IAI46_13730 +0.4 1.7 helix-turn-helix domain-containing protein compare
IAI46_15665 +0.4 1.5 hypothetical protein compare
IAI46_15705 +0.4 1.7 4Fe-4S dicluster domain-containing protein compare
IAI46_05305 +0.4 1.2 TraB/GumN family protein compare
IAI46_11400 +0.4 0.7 DUF3811 domain-containing protein compare
IAI46_13025 +0.4 0.9 ABC transporter ATP-binding protein compare
IAI46_15955 +0.4 1.3 flagellar basal body rod protein FlgC compare
IAI46_11050 +0.4 1.6 C40 family peptidase compare
IAI46_19830 +0.4 1.6 DNA endonuclease SmrA compare


Specific Phenotypes

None in this experiment

For Serratia liquefaciens MT49 in stress experiments

For stress Potassium dichromate across organisms