Experiment set1IT080 for Serratia liquefaciens MT49

Compare to:

Potassium dichromate 20 uM, anaerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI46_24465 +1.5 6.5 HTH-type transcriptional repressor FabR compare
IAI46_17680 +1.0 2.7 NADH-quinone oxidoreductase subunit NuoH compare
IAI46_12560 +1.0 3.1 hydrogenase formation protein HypD compare
IAI46_23630 +1.0 2.1 PTS lactose/cellobiose transporter subunit IIA compare
IAI46_01120 +1.0 5.3 NAD(P)H-flavin reductase compare
IAI46_22480 +1.0 1.3 PTS IIA-like nitrogen regulatory protein PtsN compare
IAI46_05020 +1.0 7.6 endopeptidase La compare
IAI46_02835 +0.9 2.0 tRNA-Leu compare
IAI46_11795 +0.9 2.1 xanthine dehydrogenase accessory protein XdhC compare
IAI46_12890 +0.9 2.3 SidA/IucD/PvdA family monooxygenase compare
IAI46_18590 +0.9 3.9 hypothetical protein compare
IAI46_15315 +0.9 2.6 succinylglutamate desuccinylase compare
IAI46_03340 +0.9 2.7 3-isopropylmalate dehydratase small subunit compare
IAI46_24315 +0.8 2.3 4-oxalocrotonate tautomerase family protein compare
IAI46_17365 +0.8 1.4 YejL family protein compare
IAI46_09355 +0.8 1.8 hypothetical protein compare
IAI46_03305 +0.8 3.1 thiamine ABC transporter ATP-binding protein ThiQ compare
IAI46_03115 +0.8 2.1 FKBP-type peptidyl-prolyl cis-trans isomerase compare
IAI46_12515 +0.7 1.8 4Fe-4S dicluster domain-containing protein compare
IAI46_14560 +0.7 1.7 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI46_06650 +0.7 3.1 tRNA dihydrouridine(16) synthase DusC compare
IAI46_15005 +0.7 2.1 hypothetical protein compare
IAI46_15115 +0.7 1.6 hypothetical protein compare
IAI46_13710 +0.7 3.6 hypothetical protein compare
IAI46_15950 +0.7 2.1 flagellar hook assembly protein FlgD compare
IAI46_24895 +0.7 1.5 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
IAI46_14750 +0.7 2.0 hypothetical protein compare
IAI46_16350 +0.7 2.0 1,2-phenylacetyl-CoA epoxidase subunit A compare
IAI46_14350 +0.7 1.6 peptide-methionine (R)-S-oxide reductase MsrB compare
IAI46_23835 +0.7 2.4 Fe-S biogenesis protein NfuA compare
IAI46_16515 +0.6 2.0 diacylglycerol kinase compare
IAI46_21620 +0.6 2.4 hypothetical protein compare
IAI46_13575 +0.6 2.8 C40 family peptidase compare
IAI46_04975 +0.6 3.0 cytochrome o ubiquinol oxidase subunit III compare
IAI46_13800 +0.6 1.8 hypothetical protein compare
IAI46_15220 +0.6 1.9 hypothetical protein compare
IAI46_11990 +0.6 1.4 MoaF N-terminal domain-containing protein compare
IAI46_14570 +0.6 2.0 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
IAI46_22310 +0.6 2.7 DnaA initiator-associating protein DiaA compare
IAI46_09995 +0.6 1.4 DNA polymerase III subunit theta compare
IAI46_10230 +0.6 2.3 TetR/AcrR family transcriptional regulator compare
IAI46_07570 +0.6 3.0 nitrilase family protein compare
IAI46_10445 +0.6 1.0 NUDIX hydrolase compare
IAI46_14600 +0.6 3.1 murein DD-endopeptidase MepM compare
IAI46_12645 +0.6 1.3 DUF2946 domain-containing protein compare
IAI46_04965 +0.6 3.5 protoheme IX farnesyltransferase compare
IAI46_06270 +0.6 2.5 succinate dehydrogenase iron-sulfur subunit compare
IAI46_09400 +0.6 1.8 hypothetical protein compare
IAI46_04980 +0.6 4.3 cytochrome o ubiquinol oxidase subunit I compare
IAI46_00915 +0.6 1.6 DUF1145 family protein compare
IAI46_06925 +0.5 1.7 ParD-like family protein compare
IAI46_09305 +0.5 2.0 hypothetical protein compare
IAI46_17705 +0.5 2.0 NADH-quinone oxidoreductase subunit B compare
IAI46_04985 +0.5 3.0 cytochrome o ubiquinol oxidase subunit II compare
IAI46_09805 +0.5 2.1 aminodeoxychorismate lyase compare
IAI46_14505 +0.5 2.3 lytic murein transglycosylase compare
IAI46_09145 +0.5 1.5 aldehyde dehydrogenase (NADP(+)) compare
IAI46_14980 +0.5 2.2 oxidoreductase compare
IAI46_05340 +0.5 2.7 SDR family oxidoreductase compare
IAI46_18495 +0.5 2.3 sulfate/thiosulfate ABC transporter ATP-binding protein CysA compare
IAI46_07650 +0.5 2.1 common pilus major fimbrillin subunit EcpA compare
IAI46_18365 +0.5 2.3 enterochelin esterase compare
IAI46_16365 +0.5 1.3 phenylacetate-CoA oxygenase subunit PaaJ compare
IAI46_12740 +0.5 1.2 LysR family transcriptional regulator compare
IAI46_08510 +0.5 2.3 ATP-dependent Clp protease adapter ClpS compare
IAI46_11485 +0.5 1.5 electron transport complex subunit RsxB compare
IAI46_00685 +0.5 3.7 uroporphyrinogen-III C-methyltransferase compare
IAI46_15680 +0.5 2.1 putative cation transport regulator ChaB compare
IAI46_14385 +0.5 1.0 GNAT family N-acetyltransferase compare
IAI46_02930 +0.5 1.5 transcriptional regulator compare
IAI46_06615 +0.5 1.5 transcriptional regulator CecR compare
IAI46_13400 +0.5 2.1 glutaredoxin family protein compare
IAI46_16170 +0.5 1.4 3-oxoadipate enol-lactonase compare
IAI46_17655 +0.5 2.1 NADH-quinone oxidoreductase subunit M compare
IAI46_01910 +0.5 1.2 preprotein translocase subunit SecG compare
IAI46_09165 +0.5 1.8 FAD-dependent oxidoreductase compare
IAI46_17675 +0.5 1.7 NADH-quinone oxidoreductase subunit NuoI compare
IAI46_10895 +0.5 1.9 type V toxin-antitoxin system endoribonuclease antitoxin GhoS compare
IAI46_23955 +0.5 2.1 gluconokinase compare
IAI46_11430 +0.5 1.5 cupin domain-containing protein compare
IAI46_19745 +0.5 2.2 hypothetical protein compare
IAI46_13885 +0.5 1.0 glycyl-radical enzyme activating protein compare
IAI46_00615 +0.5 2.0 glucose-1-phosphate thymidylyltransferase RfbA compare
IAI46_01275 +0.5 2.7 oxidoreductase compare
IAI46_25120 +0.5 1.8 F0F1 ATP synthase subunit I compare
IAI46_14905 +0.5 0.8 hypothetical protein compare
IAI46_07415 +0.5 1.3 GNAT family N-acetyltransferase compare
IAI46_14225 +0.5 1.1 thymidine kinase compare
IAI46_17635 +0.5 2.7 Tn3 family transposase compare
IAI46_11585 +0.5 1.4 NUDIX domain-containing protein compare
IAI46_21230 +0.5 1.8 two-component system sensor histidine kinase QseC compare
IAI46_17620 +0.5 2.2 LysR family transcriptional regulator compare
IAI46_15030 +0.5 1.3 hypothetical protein compare
IAI46_17300 +0.5 2.3 phosphatase PAP2 family protein compare
IAI46_10060 +0.5 1.4 hypothetical protein compare
IAI46_05525 +0.5 1.6 hypothetical protein compare
IAI46_11055 +0.5 1.3 lipoate--protein ligase A compare
IAI46_05695 +0.5 1.5 toxin compare
IAI46_05590 +0.4 0.7 DotU family type IV/VI secretion system protein compare
IAI46_15285 +0.4 1.4 DUF5405 family protein compare
IAI46_13170 +0.4 2.0 pyridoxal kinase compare
IAI46_12370 +0.4 2.0 aldo/keto reductase compare
IAI46_22135 +0.4 0.9 G/U mismatch-specific DNA glycosylase compare
IAI46_17110 +0.4 1.0 ABC transporter substrate-binding protein compare
IAI46_09095 +0.4 0.9 antibiotic biosynthesis monooxygenase compare
IAI46_19735 +0.4 1.7 histidine kinase compare
IAI46_03570 +0.4 2.2 vitamin B12 ABC transporter substrate-binding protein BtuF compare
IAI46_15100 +0.4 1.6 hypothetical protein compare
IAI46_15025 +0.4 1.9 hypothetical protein compare
IAI46_17870 +0.4 1.9 transcriptional regulator TctD compare
IAI46_12725 +0.4 0.7 TetR/AcrR family transcriptional regulator compare
IAI46_00620 +0.4 1.3 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
IAI46_05515 +0.4 1.2 fimbrial protein compare
IAI46_13515 +0.4 1.3 carbonate dehydratase compare
IAI46_15865 +0.4 1.0 flagellar hook-length control protein FliK compare
IAI46_16105 +0.4 1.4 4-hydroxy-2-oxovalerate aldolase compare
IAI46_09085 +0.4 1.7 VTT domain-containing protein compare
IAI46_13985 +0.4 1.8 YciK family oxidoreductase compare
IAI46_08870 +0.4 1.4 macrodomain Ter protein MatP compare
IAI46_09040 +0.4 2.0 pyrimidine utilization protein C compare
IAI46_11320 +0.4 1.4 superoxide dismutase family protein compare
IAI46_17885 +0.4 1.4 tripartite tricarboxylate transporter TctB family protein compare
IAI46_04960 +0.4 2.7 MFS transporter compare
IAI46_01810 +0.4 1.5 peroxide/acid stress response protein YhcN compare
IAI46_08530 +0.4 1.2 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
IAI46_17685 +0.4 2.1 NADH-quinone oxidoreductase subunit NuoG compare
IAI46_03450 +0.4 1.9 D-alanine--D-alanine ligase compare
IAI46_18375 +0.4 2.6 ABC transporter substrate-binding protein compare
IAI46_21455 +0.4 0.7 YggL family protein compare
IAI46_11675 +0.4 2.4 MFS transporter compare
IAI46_11865 +0.4 2.2 peptidase domain-containing ABC transporter compare
IAI46_09375 +0.4 0.6 TraR/DksA family transcriptional regulator compare
IAI46_16225 +0.4 1.2 MgtC family protein compare
IAI46_23205 +0.4 0.6 5S ribosomal RNA compare
IAI46_16140 +0.4 1.0 hypothetical protein compare
IAI46_12845 +0.4 1.5 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase compare
IAI46_22920 +0.4 2.0 MmcQ/YjbR family DNA-binding protein compare
IAI46_14145 +0.4 1.7 cardiolipin synthase compare
IAI46_16835 +0.4 1.1 DUF2623 family protein compare
IAI46_10390 +0.4 1.9 two-component system sensor histidine kinase PhoQ compare
IAI46_11240 +0.4 1.7 HTH-type transcriptional repressor PurR compare
IAI46_11610 +0.4 1.5 LysR family transcriptional regulator compare
IAI46_11225 +0.4 2.1 cyclopropane fatty acyl phospholipid synthase compare
IAI46_06935 +0.4 2.1 ABC transporter substrate-binding protein compare
IAI46_19345 +0.4 1.3 iron-sulfur cluster assembly protein IscA compare
IAI46_13110 +0.4 1.0 L-2-amino-thiazoline-4-carboxylic acid hydrolase compare
IAI46_10085 +0.4 1.8 aldolase compare
IAI46_11715 +0.4 1.9 YnfA family protein compare
IAI46_06415 +0.4 1.3 phosphate-starvation-inducible protein PsiF compare
IAI46_06225 +0.4 1.7 5-oxoprolinase subunit PxpA compare
IAI46_11465 +0.4 0.7 electron transport complex subunit RsxG compare
IAI46_19080 +0.4 1.2 DNA-binding transcriptional repressor compare
IAI46_09065 +0.4 1.3 CDP-glycerol glycerophosphotransferase family protein compare
IAI46_12200 +0.4 1.5 fused MFS/spermidine synthase compare
IAI46_09635 +0.4 1.0 helix-turn-helix transcriptional regulator compare
IAI46_06295 +0.4 2.0 cytochrome ubiquinol oxidase subunit I compare
IAI46_11840 +0.4 1.0 (2Fe-2S)-binding protein compare
IAI46_12300 +0.4 1.6 ABC transporter ATP-binding protein compare
IAI46_11920 +0.4 1.0 chromate transporter compare
IAI46_13520 +0.4 1.5 GTP cyclohydrolase I FolE2 compare
IAI46_19605 +0.4 1.4 ankyrin repeat domain-containing protein compare
IAI46_10310 +0.4 1.0 heme-degrading domain-containing protein compare
IAI46_09425 +0.4 0.9 hypothetical protein compare
IAI46_11810 +0.4 1.4 isochorismatase family protein compare
IAI46_03010 +0.4 1.7 protein CreA compare
IAI46_01680 +0.4 1.9 DUF1471 domain-containing protein compare
IAI46_04215 +0.4 1.3 type II toxin-antitoxin system RelE/ParE family toxin compare
IAI46_05295 +0.4 2.3 isoprenylcysteine carboxylmethyltransferase family protein compare
IAI46_13955 +0.4 1.2 YmiA family putative membrane protein compare
IAI46_24255 +0.4 2.8 response regulator compare
IAI46_09300 +0.3 1.2 AlpA family phage regulatory protein compare
IAI46_12875 +0.3 1.1 4-hydroxybenzoate 3-monooxygenase compare
IAI46_17700 +0.3 1.6 NADH-quinone oxidoreductase subunit C/D compare
IAI46_16850 +0.3 1.6 flavodoxin family protein compare
IAI46_02050 +0.3 1.3 YhbP family protein compare
IAI46_11160 +0.3 1.3 Fe-S cluster assembly protein SufD compare
IAI46_03055 +0.3 2.0 transaldolase compare
IAI46_13320 +0.3 0.8 serine protease compare
IAI46_14425 +0.3 1.2 ABC transporter ATP-binding protein compare
IAI46_18165 +0.3 1.7 hypothetical protein compare
IAI46_24600 +0.3 2.5 glycerol kinase GlpK compare
IAI46_16125 +0.3 1.7 cupin-like domain-containing protein compare
IAI46_15595 +0.3 0.9 winged helix-turn-helix domain-containing protein compare
IAI46_07045 +0.3 1.5 DUF4810 domain-containing protein compare
IAI46_18065 +0.3 2.2 phospholipid-binding lipoprotein MlaA compare
IAI46_06265 +0.3 2.0 succinate dehydrogenase flavoprotein subunit compare
IAI46_06695 +0.3 1.2 fimbrial protein compare
IAI46_05905 +0.3 0.8 lipoyl(octanoyl) transferase LipB compare
IAI46_15185 +0.3 1.3 DNA-binding protein compare
IAI46_13015 +0.3 1.2 iron ABC transporter substrate-binding protein compare
IAI46_10380 +0.3 1.5 malate/lactate/ureidoglycolate dehydrogenase compare
IAI46_08235 +0.3 0.9 agmatinase compare
IAI46_11975 +0.3 1.9 DMT family transporter compare
IAI46_02165 +0.3 1.1 colicin-D compare
IAI46_12925 +0.3 1.4 alpha-glucosidase compare
IAI46_14000 +0.3 1.3 alpha/beta hydrolase compare
IAI46_14160 +0.3 1.5 glycerol kinase compare
IAI46_11600 +0.3 1.6 PTS maltose transporter subunit IICB compare
IAI46_19320 +0.3 1.8 aminopeptidase PepB compare
IAI46_19480 +0.3 2.1 membrane-bound lytic murein transglycosylase MltF compare


Specific Phenotypes

None in this experiment

For Serratia liquefaciens MT49 in stress experiments

For stress Potassium dichromate across organisms