Experiment set1IT078 for Pseudomonas sp. RS175

200 most important genes:

gene	name	fitness	t score	description
PFR28_03860		-6.0	-4.1	putative murein peptide carboxypeptidase
PFR28_00837		-3.8	-6.2	hypothetical protein
PFR28_04712		-2.9	-1.3	Dodecin
PFR28_02608		-2.8	-3.0	DNA translocase FtsK
PFR28_04072		-2.6	-4.7	Bifunctional folate synthesis protein
PFR28_04992		-2.6	-1.6	hypothetical protein
PFR28_00695		-2.5	-2.1	Sulfur carrier protein TusA
PFR28_00803		-2.5	-9.3	Transcriptional regulatory protein TyrR	conserved
PFR28_00221		-2.4	-9.6	Homogentisate 1,2-dioxygenase	conserved
PFR28_02823		-2.2	-1.2	3-isopropylmalate dehydratase small subunit 1
PFR28_02475		-2.0	-8.1	4-hydroxyphenylpyruvate dioxygenase	conserved
PFR28_00223		-2.0	-5.1	Maleylpyruvate isomerase	conserved
PFR28_02821		-2.0	-10.3	3-isopropylmalate dehydrogenase
PFR28_04529		-2.0	-3.0	hypothetical protein
PFR28_00780		-2.0	-1.1	hypothetical protein
PFR28_05139		-1.9	-2.5	hypothetical protein
PFR28_02824		-1.9	-4.5	3-isopropylmalate dehydratase large subunit
PFR28_03413		-1.8	-3.8	Holliday junction ATP-dependent DNA helicase RuvA
PFR28_01794		-1.8	-3.4	putative tautomerase
PFR28_04278		-1.8	-6.7	Dihydroxy-acid dehydratase
PFR28_03179		-1.8	-1.6	tRNA-Val
PFR28_00802		-1.7	-5.8	Phenylalanine-4-hydroxylase
PFR28_00222		-1.7	-9.8	hypothetical protein
PFR28_02449		-1.7	-8.0	putative branched-chain-amino-acid aminotransferase
PFR28_03697		-1.6	-7.8	Ketol-acid reductoisomerase (NADP(+))
PFR28_03699		-1.5	-4.7	Acetolactate synthase isozyme 3 large subunit
PFR28_02206		-1.5	-2.4	Biopolymer transport protein ExbD
PFR28_00451		-1.5	-1.4	hypothetical protein
PFR28_00800		-1.5	-6.3	Aspartate aminotransferase	conserved
PFR28_00305		-1.5	-6.8	2-isopropylmalate synthase
PFR28_03718		-1.4	-3.5	Transcriptional regulatory protein ZraR
PFR28_00068		-1.4	-0.9	hypothetical protein
PFR28_00356		-1.4	-3.2	Protein-glutamate methylesterase/protein-glutamine glutaminase
PFR28_04866		-1.4	-2.0	1,4-dihydroxy-2-naphthoyl-CoA hydrolase
PFR28_02386		-1.3	-1.9	Protein hcp1
PFR28_04071		-1.3	-1.2	Multifunctional CCA protein
PFR28_03698		-1.3	-6.1	Acetolactate synthase isozyme 3 small subunit
PFR28_04585		-1.3	-4.3	Chromosome partitioning protein ParA
PFR28_04834		-1.3	-8.4	L-threonine dehydratase biosynthetic IlvA
PFR28_02889		-1.3	-3.0	hypothetical protein
PFR28_00980		-1.3	-1.6	ATP-dependent RNA helicase DeaD
PFR28_01312		-1.3	-2.3	HTH-type transcriptional regulator NorG
PFR28_04887		-1.3	-2.8	'3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11
PFR28_04713		-1.2	-2.0	putative protein YqjD
PFR28_01879		-1.2	-1.1	hypothetical protein
PFR28_00176		-1.2	-1.0	Lipopolysaccharide export system protein LptC
PFR28_03414		-1.1	-1.9	Crossover junction endodeoxyribonuclease RuvC
PFR28_03007		-1.1	-5.4	Aminodeoxychorismate lyase
PFR28_04461		-1.1	-1.6	hypothetical protein
PFR28_02378		-1.1	-2.8	2-ketogluconate reductase
PFR28_01003		-1.1	-3.3	hypothetical protein
PFR28_01230		-1.1	-2.9	Lon protease
PFR28_01156		-1.1	-3.9	hypothetical protein
PFR28_02941		-1.1	-1.8	hypothetical protein
PFR28_03412		-1.1	-2.6	Holliday junction ATP-dependent DNA helicase RuvB
PFR28_00187		-1.0	-5.3	Histidinol dehydrogenase
PFR28_03446		-1.0	-2.4	hypothetical protein
PFR28_00555		-1.0	-1.9	Inner membrane protein YbaN
PFR28_02933		-1.0	-6.3	Aminodeoxychorismate synthase component 1	conserved
PFR28_01500		-1.0	-2.9	hypothetical protein
PFR28_00948		-1.0	-1.6	hypothetical protein
PFR28_04633		-1.0	-2.4	Alginate biosynthesis sensor protein KinB
PFR28_01884		-1.0	-3.8	putative enoyl-CoA hydratase echA8
PFR28_01594		-1.0	-1.8	hypothetical protein
PFR28_05201		-1.0	-1.8	Precorrin-6Y C(5,15)-methyltransferase [decarboxylating]
PFR28_00439		-1.0	-2.9	hypothetical protein
PFR28_03856		-1.0	-1.3	LPS-assembly lipoprotein LptE
PFR28_00978		-1.0	-5.9	Phospho-2-dehydro-3-deoxyheptonate aldolase
PFR28_04156		-1.0	-3.0	3-keto-5-aminohexanoate cleavage enzyme
PFR28_01382		-1.0	-2.4	hypothetical protein
PFR28_03420		-1.0	-2.4	hypothetical protein
PFR28_01083		-1.0	-3.2	putative copper-importing P-type ATPase A
PFR28_04903		-0.9	-3.0	hypothetical protein
PFR28_04377		-0.9	-3.0	hypothetical protein
PFR28_03596		-0.9	-1.2	Transcriptional regulator MraZ
PFR28_01081		-0.9	-3.8	hypothetical protein
PFR28_00749		-0.9	-3.5	hypothetical protein
PFR28_00864		-0.9	-3.6	hypothetical protein
PFR28_01154		-0.9	-1.9	hypothetical protein
PFR28_03719		-0.9	-2.1	Poly(A) polymerase I
PFR28_01865		-0.9	-2.8	hypothetical protein
PFR28_01313		-0.9	-1.9	hypothetical protein
PFR28_03680		-0.9	-1.8	hypothetical protein
PFR28_01142		-0.9	-5.7	Transaldolase
PFR28_03883		-0.9	-3.3	UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase
PFR28_01431		-0.9	-1.9	Chemotaxis protein CheW
PFR28_05125		-0.9	-3.9	ATP phosphoribosyltransferase regulatory subunit
PFR28_00271		-0.9	-3.1	hypothetical protein
PFR28_05078		-0.9	-1.7	hypothetical protein
PFR28_00561		-0.9	-1.7	Phosphogluconate dehydratase
PFR28_03383		-0.9	-6.2	Glycine dehydrogenase (decarboxylating)
PFR28_01690		-0.8	-1.4	hypothetical protein
PFR28_01251		-0.8	-0.8	ECF RNA polymerase sigma factor EcfG
PFR28_03533		-0.8	-0.5	DNA-binding protein HU 1
PFR28_00098		-0.8	-3.2	Nicotinate-nucleotide pyrophosphorylase [carboxylating]
PFR28_02525		-0.8	-2.5	hypothetical protein
PFR28_04358		-0.8	-1.7	hypothetical protein
PFR28_02613		-0.8	-4.9	ATP-dependent Clp protease ATP-binding subunit ClpA
PFR28_02510		-0.8	-1.0	Chemotaxis protein CheY
PFR28_00186		-0.8	-2.2	ATP phosphoribosyltransferase
PFR28_00159		-0.8	-3.9	hypothetical protein
PFR28_03388		-0.8	-4.4	Quinolinate synthase A
PFR28_01329		-0.8	-1.3	hypothetical protein
PFR28_00876		-0.8	-1.6	hypothetical protein
PFR28_01160		-0.8	-1.9	hypothetical protein
PFR28_04102		-0.8	-3.4	8-amino-7-oxononanoate synthase
PFR28_00466		-0.8	-1.8	hypothetical protein
PFR28_00304		-0.8	-1.2	hypothetical protein
PFR28_05218		-0.7	-2.0	Ribosomal protein L11 methyltransferase
PFR28_00966		-0.7	-5.1	HTH-type transcriptional regulator CysB
PFR28_00425		-0.7	-4.5	Protein-L-isoaspartate O-methyltransferase
PFR28_04842		-0.7	-2.1	D-3-phosphoglycerate dehydrogenase
PFR28_02048		-0.7	-1.8	hypothetical protein
PFR28_01913		-0.7	-2.1	hypothetical protein
PFR28_01751		-0.7	-1.2	putative type II secretion system protein HxcR
PFR28_02280		-0.7	-1.0	hypothetical protein
PFR28_03417		-0.7	-0.9	hypothetical protein
PFR28_02324		-0.7	-1.1	hypothetical protein
PFR28_04363		-0.7	-2.1	Protein HemY
PFR28_00331		-0.7	-1.8	Tyrosine recombinase XerD
PFR28_05097		-0.7	-1.4	hypothetical protein
PFR28_04308		-0.7	-1.4	Amino-acid acetyltransferase
PFR28_00037		-0.7	-1.1	putative RNA polymerase sigma factor FecI
PFR28_02590		-0.7	-1.9	hypothetical protein
PFR28_05216		-0.7	-2.9	tRNA-dihydrouridine synthase B
PFR28_04369		-0.7	-0.9	hypothetical protein
PFR28_04813		-0.7	-1.2	hypothetical protein
PFR28_00342		-0.7	-1.6	hypothetical protein
PFR28_02448		-0.7	-3.3	Dihydrolipoyl dehydrogenase
PFR28_02831		-0.7	-3.4	hypothetical protein
PFR28_05077		-0.7	-3.3	D-inositol-3-phosphate glycosyltransferase
PFR28_01113		-0.7	-1.2	DNA topoisomerase 1
PFR28_04939		-0.7	-1.8	putative protein YibN
PFR28_03369		-0.6	-2.3	Glycerol-3-phosphate regulon repressor
PFR28_03616		-0.6	-1.8	Methylated-DNA--protein-cysteine methyltransferase
PFR28_04120		-0.6	-0.8	hypothetical protein
PFR28_02925		-0.6	-3.7	2-methylcitrate dehydratase (2-methyl-trans-aconitate forming)
PFR28_04282		-0.6	-1.5	putative membrane protein
PFR28_00694		-0.6	-2.1	Beta-barrel assembly-enhancing protease
PFR28_00893		-0.6	-1.5	hypothetical protein
PFR28_02234		-0.6	-1.7	hypothetical protein
PFR28_02766		-0.6	-0.9	Bacitracin export ATP-binding protein BceA
PFR28_04933		-0.6	-1.7	Imidazole glycerol phosphate synthase subunit HisF
PFR28_03890		-0.6	-1.7	hypothetical protein
PFR28_02478		-0.6	-1.5	hypothetical protein
PFR28_04721		-0.6	-0.9	hypothetical protein
PFR28_01533		-0.6	-2.3	hypothetical protein
PFR28_01607		-0.6	-2.0	hypothetical protein
PFR28_02289		-0.6	-0.9	HTH-type transcriptional repressor NicS
PFR28_03625		-0.6	-4.3	Metalloprotease LoiP
PFR28_01084		-0.6	-2.3	hypothetical protein
PFR28_04737		-0.6	-3.5	Protein YdgA
PFR28_01718		-0.6	-1.5	Response regulator receiver protein CpdR
PFR28_04403		-0.6	-0.7	hypothetical protein
PFR28_02688		-0.6	-0.5	hypothetical protein
PFR28_02210		-0.6	-0.8	cAMP-activated global transcriptional regulator CRP
PFR28_00578		-0.6	-1.6	hypothetical protein
PFR28_02283		-0.6	-0.9	hypothetical protein
PFR28_02885		-0.6	-3.2	hypothetical protein
PFR28_03635		-0.6	-2.1	Malate:quinone oxidoreductase
PFR28_04986		-0.6	-2.0	Phosphoribosyl-AMP cyclohydrolase
PFR28_02594		-0.6	-2.0	Acetyltransferase
PFR28_04902		-0.6	-2.1	Inner membrane protein YgaZ
PFR28_01015		-0.6	-0.6	'3'-5' exonuclease DinG' transl_table=11
PFR28_00950		-0.6	-2.9	'3'-5' ssDNA/RNA exonuclease TatD' transl_table=11
PFR28_03463		-0.6	-0.9	hypothetical protein
PFR28_02587		-0.6	-1.4	hypothetical protein
PFR28_01376		-0.6	-0.7	hypothetical protein
PFR28_03884		-0.6	-2.7	Acetoin catabolism regulatory protein
PFR28_05000		-0.6	-0.9	Cell division protein FtsN
PFR28_03571		-0.6	-1.8	Protein AaeX
PFR28_03530		-0.6	-0.8	hypothetical protein
PFR28_01126		-0.6	-2.3	FAD:protein FMN transferase
PFR28_02126		-0.6	-1.9	Riboflavin transporter RibZ
PFR28_01814		-0.6	-2.1	hypothetical protein
PFR28_01486		-0.6	-1.6	Gamma-glutamylputrescine oxidoreductase
PFR28_00716		-0.6	-1.8	hypothetical protein
PFR28_03085		-0.6	-2.1	hypothetical protein
PFR28_02884		-0.6	-2.8	Trans-aconitate 2-methyltransferase
PFR28_01661		-0.6	-0.8	Delta(1)-pyrroline-2-carboxylate/Delta(1)- piperideine-2-carboxylate reductase
PFR28_03650		-0.6	-0.7	hypothetical protein
PFR28_05212		-0.6	-3.0	Sensor histidine kinase RcsC
PFR28_00525		-0.6	-1.5	Outer membrane lipoprotein SlyB
PFR28_02616		-0.6	-4.1	Isocitrate dehydrogenase [NADP]
PFR28_01616		-0.6	-1.0	HTH-type transcriptional regulator YofA
PFR28_03827		-0.6	-0.9	HTH-type transcriptional regulator LrpC
PFR28_00563		-0.6	-0.8	Transcriptional regulatory protein OmpR
PFR28_01952		-0.6	-1.1	hypothetical protein
PFR28_01764		-0.6	-1.9	hypothetical protein
PFR28_02330		-0.5	-1.6	3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase
PFR28_01897		-0.5	-1.6	HTH-type transcriptional regulator MtrA
PFR28_02132		-0.5	-2.3	Response regulator protein TmoT
PFR28_04858		-0.5	-2.3	3-oxoacyl-[acyl-carrier-protein] reductase FabG
PFR28_05153		-0.5	-3.9	Leu/Ile/Val-binding protein
PFR28_02562		-0.5	-1.3	hypothetical protein
PFR28_03481		-0.5	-1.0	hypothetical protein
PFR28_02103		-0.5	-2.4	hypothetical protein
PFR28_03504		-0.5	-1.4	DNA-binding protein
PFR28_03195		-0.5	-1.3	hypothetical protein
PFR28_04935		-0.5	-2.3	hypothetical protein

Specific Phenotypes

For 9 genes in this experiment

For carbon source L-Phenylalanine in Pseudomonas sp. RS175

For carbon source L-Phenylalanine across organisms