Experiment set1IT077 for Rhizobium sp. OAE497

Compare to:

L-Citrulline carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS19050 -6.7 -6.5 3-isopropylmalate dehydrogenase compare
ABIE40_RS02340 -6.7 -7.9 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS00245 -6.6 -7.9 prephenate dehydratase compare
ABIE40_RS18380 -6.6 -7.8 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS11950 -6.3 -6.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS19040 -6.3 -4.3 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS18590 -6.2 -12.7 homoserine O-succinyltransferase compare
ABIE40_RS17525 -6.2 -3.5 lipoprotein compare
ABIE40_RS13330 -6.1 -8.4 2-isopropylmalate synthase compare
ABIE40_RS09095 -5.9 -4.1 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.7 -3.3 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS19355 -5.7 -5.3 thioredoxin compare
ABIE40_RS09545 -5.6 -3.7 anthranilate phosphoribosyltransferase compare
ABIE40_RS18775 -5.5 -16.4 pyruvate carboxylase compare
ABIE40_RS17530 -5.5 -3.8 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.4 -3.7 histidinol-phosphatase compare
ABIE40_RS08635 -5.4 -8.2 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS03665 -5.3 -3.7 ATP phosphoribosyltransferase compare
ABIE40_RS01970 -5.3 -3.6 acetylglutamate kinase compare
ABIE40_RS10725 -5.3 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS09155 -5.2 -6.2 DUF934 domain-containing protein compare
ABIE40_RS02325 -5.2 -3.6 ornithine carbamoyltransferase compare
ABIE40_RS20460 -5.2 -3.6 precorrin-3B synthase compare
ABIE40_RS03660 -5.2 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS11150 -5.2 -6.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS19435 -5.1 -2.9 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10720 -5.0 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS02725 -5.0 -6.8 histidinol dehydrogenase compare
ABIE40_RS11105 -5.0 -3.4 cobyrinate a,c-diamide synthase compare
ABIE40_RS19460 -5.0 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS09725 -4.9 -3.4 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS06930 -4.8 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS10180 -4.8 -3.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06560 -4.8 -3.3 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19440 -4.8 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS09150 -4.8 -18.5 nitrite/sulfite reductase compare
ABIE40_RS19330 -4.8 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS11165 -4.7 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS17650 -4.7 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS09360 -4.7 -3.2 excinuclease ABC subunit UvrA compare
ABIE40_RS20440 -4.6 -3.2 cobalt-precorrin-6A reductase compare
ABIE40_RS11495 -4.6 -3.2 acetolactate synthase 3 large subunit compare
ABIE40_RS13410 -4.6 -4.5 anthranilate synthase compare
ABIE40_RS20435 -4.5 -3.1 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS22300 -4.5 -5.4 superoxide dismutase compare
ABIE40_RS18925 -4.5 -5.3 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS01930 -4.5 -2.5 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS11095 -4.5 -3.1 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS11175 -4.5 -6.1 cobyric acid synthase compare
ABIE40_RS17595 -4.4 -3.1 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.4 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS06270 -4.3 -7.8 amidophosphoribosyltransferase compare
ABIE40_RS09660 -4.3 -16.0 AI-2E family transporter compare
ABIE40_RS11155 -4.3 -4.2 cobaltochelatase subunit CobN compare
ABIE40_RS06730 -4.3 -7.6 riboflavin synthase compare
ABIE40_RS20455 -4.3 -2.4 precorrin-8X methylmutase compare
ABIE40_RS00930 -4.2 -5.8 ABC transporter permease compare
ABIE40_RS19130 -4.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS20430 -4.2 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS12925 -4.2 -13.5 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS08005 -4.1 -2.8 dihydroxy-acid dehydratase compare
ABIE40_RS20465 -4.1 -2.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS22570 -4.0 -19.7 alpha-glucosidase/alpha-galactosidase compare
ABIE40_RS00935 -4.0 -3.9 ABC transporter substrate-binding protein compare
ABIE40_RS14985 -4.0 -2.6 glycosyltransferase compare
ABIE40_RS05660 -4.0 -3.9 response regulator transcription factor compare
ABIE40_RS03405 -4.0 -2.7 anti-sigma factor compare
ABIE40_RS12135 -4.0 -2.8 methionine synthase compare
ABIE40_RS14990 -4.0 -12.9 glycosyltransferase family 2 protein compare
ABIE40_RS22540 -4.0 -8.3 AraC family transcriptional regulator compare
ABIE40_RS19445 -4.0 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS17645 -3.9 -2.7 cobaltochelatase subunit CobT compare
ABIE40_RS09090 -3.9 -8.9 nitrogen regulation protein NR(I) compare
ABIE40_RS02320 -3.9 -5.3 aspartate aminotransferase family protein compare
ABIE40_RS14980 -3.8 -5.2 glycoside hydrolase family 16 protein compare
ABIE40_RS18920 -3.7 -4.6 glutamate 5-kinase compare
ABIE40_RS05430 -3.7 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS22545 -3.6 -11.1 alpha-glucosidase/alpha-galactosidase compare
ABIE40_RS09140 -3.6 -8.6 siroheme synthase CysG compare
ABIE40_RS17590 -3.5 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS16655 -3.5 -6.6 creatininase family protein compare
ABIE40_RS15920 -3.5 -1.2 50S ribosomal protein L31 compare
ABIE40_RS10155 -3.5 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS20450 -3.5 -3.8 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS06050 -3.4 -7.2 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS08645 -3.4 -8.1 LL-diaminopimelate aminotransferase compare
ABIE40_RS05155 -3.4 -6.4 DUF5330 domain-containing protein compare
ABIE40_RS22555 -3.4 -14.9 ABC transporter permease compare
ABIE40_RS22550 -3.4 -15.8 ABC transporter substrate-binding protein compare
ABIE40_RS07740 -3.3 -2.4 elongation factor Tu compare
ABIE40_RS10200 -3.3 -2.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS00725 -3.2 -4.9 DNA cytosine methyltransferase compare
ABIE40_RS20445 -3.2 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS16170 -3.2 -3.7 DUF882 domain-containing protein compare
ABIE40_RS06720 -3.2 -2.7 transcriptional regulator NrdR compare
ABIE40_RS03190 -3.2 -6.0 phosphogluconate dehydratase compare
ABIE40_RS22560 -3.2 -11.8 ABC transporter permease compare
ABIE40_RS18685 -3.1 -4.3 beta-ketoacyl-ACP reductase compare
ABIE40_RS06725 -3.1 -6.4 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS19260 -3.1 -3.0 DNA polymerase III subunit epsilon compare
ABIE40_RS01765 -3.1 -6.5 [protein-PII] uridylyltransferase compare
ABIE40_RS16070 -3.1 -4.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS00580 -3.0 -3.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS08425 -3.0 -3.4 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS24490 -3.0 -1.7 flavin reductase compare
ABIE40_RS15345 -2.9 -10.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS09540 -2.9 -6.7 peptidylprolyl isomerase compare
ABIE40_RS09720 -2.8 -4.6 GTP cyclohydrolase I FolE compare
ABIE40_RS14955 -2.8 -10.3 sugar transferase compare
ABIE40_RS14345 -2.7 -12.3 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS30895 -2.7 -1.9 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS19365 -2.6 -3.9 double-strand break repair protein AddB compare
ABIE40_RS22565 -2.6 -9.9 ABC transporter ATP-binding protein compare
ABIE40_RS15855 -2.5 -3.9 cell division protein ZapA compare
ABIE40_RS08970 -2.5 -8.4 citrate synthase compare
ABIE40_RS11060 -2.5 -4.7 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS04475 -2.4 -11.6 phosphoadenylyl-sulfate reductase compare
ABIE40_RS27110 -2.4 -4.4 helix-turn-helix transcriptional regulator compare
ABIE40_RS18055 -2.4 -4.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS04465 -2.3 -13.0 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS11960 -2.3 -2.2 energy-dependent translational throttle protein EttA compare
ABIE40_RS06700 -2.3 -4.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS00925 -2.3 -4.4 ABC transporter permease compare
ABIE40_RS27255 -2.3 -1.9 hypothetical protein compare
ABIE40_RS19480 -2.3 -3.7 DUF1402 family protein compare
ABIE40_RS19245 -2.3 -6.1 Maf-like protein compare
ABIE40_RS04470 -2.3 -12.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS18880 -2.3 -10.3 UDP-glucose 4-epimerase GalE compare
ABIE40_RS12360 -2.2 -10.6 DUF5131 family protein compare
ABIE40_RS00595 -2.2 -7.7 glucokinase compare
ABIE40_RS23000 -2.2 -4.4 TetR/AcrR family transcriptional regulator compare
ABIE40_RS15730 -2.1 -3.6 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS10345 -2.1 -6.1 RNA polymerase-binding protein DksA compare
ABIE40_RS19395 -2.0 -3.8 PTS sugar transporter subunit IIA compare
ABIE40_RS08140 -2.0 -11.3 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS16210 -1.9 -7.3 homospermidine synthase compare
ABIE40_RS19645 -1.9 -9.4 acyltransferase compare
ABIE40_RS01055 -1.8 -4.6 translation elongation factor 4 compare
ABIE40_RS05665 -1.8 -3.1 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS01705 -1.8 -7.0 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS13370 -1.8 -9.3 CDF family cation efflux transporter EmfA compare
ABIE40_RS19265 -1.8 -2.5 protein-export chaperone SecB compare
ABIE40_RS18735 -1.7 -4.7 TetR/AcrR family transcriptional regulator compare
ABIE40_RS06220 -1.7 -10.4 citramalate synthase compare
ABIE40_RS09145 -1.7 -3.6 DUF2849 domain-containing protein compare
ABIE40_RS18640 -1.7 -8.1 M48 family metalloprotease compare
ABIE40_RS17560 -1.6 -3.5 cell division ATP-binding protein FtsE compare
ABIE40_RS26395 -1.6 -1.8 hypothetical protein compare
ABIE40_RS30285 -1.6 -0.9 co-chaperone GroES compare
ABIE40_RS14940 -1.6 -9.0 acyltransferase compare
ABIE40_RS13285 -1.6 -4.1 N-acetyltransferase compare
ABIE40_RS19700 -1.6 -3.1 MBL fold metallo-hydrolase compare
ABIE40_RS03485 -1.6 -9.3 MAPEG family protein compare
ABIE40_RS19360 -1.6 -3.8 double-strand break repair helicase AddA compare
ABIE40_RS11490 -1.5 -5.3 acetolactate synthase small subunit compare
ABIE40_RS17565 -1.5 -2.1 ABC transporter permease compare
ABIE40_RS07335 -1.5 -1.2 50S ribosomal protein L33 compare
ABIE40_RS17290 -1.5 -6.2 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS28815 -1.4 -5.2 GNAT family N-acetyltransferase compare
ABIE40_RS13005 -1.4 -5.1 pyrroline-5-carboxylate reductase compare
ABIE40_RS16570 -1.4 -2.3 tetratricopeptide repeat protein compare
ABIE40_RS16060 -1.4 -2.2 DUF465 domain-containing protein compare
ABIE40_RS30775 -1.4 -1.5 ferritin-like domain-containing protein compare
ABIE40_RS22665 -1.4 -2.4 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS06710 -1.4 -1.8 L,D-transpeptidase family protein compare
ABIE40_RS09980 -1.4 -1.9 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS20315 -1.4 -1.1 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS05670 -1.4 -3.4 membrane protein compare
ABIE40_RS15010 -1.4 -7.1 metallophosphoesterase compare
ABIE40_RS00490 -1.4 -6.8 DNA polymerase I compare
ABIE40_RS15760 -1.4 -3.5 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS17010 -1.4 -5.5 sugar ABC transporter permease compare
ABIE40_RS04070 -1.3 -3.7 heme o synthase compare
ABIE40_RS24310 -1.3 -5.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS08330 -1.3 -2.1 hypothetical protein compare
ABIE40_RS05545 -1.3 -2.4 Dabb family protein compare
ABIE40_RS17585 -1.3 -4.3 DUF2125 domain-containing protein compare
ABIE40_RS18975 -1.3 -7.4 S41 family peptidase compare
ABIE40_RS10140 -1.3 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS00630 -1.2 -5.7 ABC transporter ATP-binding protein compare
ABIE40_RS18300 -1.2 -6.0 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS00585 -1.2 -4.8 4-hydroxy-tetrahydrodipicolinate reductase compare
ABIE40_RS28420 -1.2 -1.4 30S ribosomal protein S21 compare
ABIE40_RS30865 -1.2 -1.3 CheR family methyltransferase compare
ABIE40_RS18125 -1.2 -4.5 translational GTPase TypA compare
ABIE40_RS17000 -1.2 -3.0 ABC transporter ATP-binding protein compare
ABIE40_RS14350 -1.2 -4.8 ThuA domain-containing protein compare
ABIE40_RS27475 -1.2 -2.4 PRC-barrel domain-containing protein compare
ABIE40_RS26670 -1.2 -0.8 hypothetical protein compare
ABIE40_RS14790 -1.1 -4.2 RluA family pseudouridine synthase compare
ABIE40_RS06575 -1.1 -6.8 RNA degradosome polyphosphate kinase compare
ABIE40_RS04225 -1.1 -7.3 pitrilysin family protein compare
ABIE40_RS09425 -1.1 -3.6 peptidylprolyl isomerase compare
ABIE40_RS27155 -1.1 -2.2 acetyltransferase compare
ABIE40_RS00625 -1.1 -6.4 ABC transporter permease compare
ABIE40_RS08935 -1.1 -2.3 RIP metalloprotease RseP compare
ABIE40_RS28940 -1.1 -2.6 hypothetical protein compare
ABIE40_RS30520 -1.1 -0.8 hypothetical protein compare
ABIE40_RS05265 -1.1 -4.6 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE40_RS12845 -1.1 -2.2 glycosyltransferase family 4 protein compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source L-Citrulline in Rhizobium sp. OAE497

For carbon source L-Citrulline across organisms