Experiment set1IT075 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Sodium perchlorate monohydrate 75 mM

200 most detrimental genes:

  gene name fitness t score description  
Echvi_0986 +2.0 7.8 Rrf2 family protein compare
Echvi_1292 +1.9 13.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_3292 +1.5 2.0 hypothetical protein compare
Echvi_1516 +1.5 3.0 hypothetical protein compare
Echvi_0222 +1.5 6.7 hypothetical protein compare
Echvi_1854 +1.4 4.5 tRNA compare
Echvi_1743 +1.4 6.4 alpha-L-glutamate ligases, RimK family compare
Echvi_1758 +1.3 5.7 Gas vesicle protein compare
Echvi_1293 +1.2 7.6 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_4094 +1.1 3.1 hypothetical protein compare
Echvi_2958 +1.1 8.3 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Echvi_0096 +1.1 2.2 Predicted pyrophosphatase compare
Echvi_1752 +1.1 3.4 hypothetical protein compare
Echvi_1930 +1.0 2.2 DNA repair proteins compare
Echvi_0299 +1.0 8.5 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_1745 +1.0 4.8 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_1140 +1.0 6.6 Response regulator of the LytR/AlgR family compare
Echvi_3193 +1.0 1.7 hypothetical protein compare
Echvi_0985 +1.0 4.8 Predicted membrane protein compare
Echvi_0620 +1.0 7.8 gliding motility associated protien GldN compare
Echvi_0298 +1.0 8.6 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_0745 +1.0 7.8 Predicted aminopeptidases compare
Echvi_0622 +0.9 6.1 gliding motility-associated protein GldL compare
Echvi_1607 +0.9 1.3 Acylphosphatases compare
Echvi_0144 +0.9 2.0 TIGR00159 family protein compare
Echvi_3246 +0.9 2.2 hypothetical protein compare
Echvi_1742 +0.9 1.4 Uncharacterized protein conserved in archaea compare
Echvi_1239 +0.9 1.3 DNA-binding regulatory protein, YebC/PmpR family compare
Echvi_0623 +0.9 8.2 gliding motility-associated lipoprotein GldK compare
Echvi_4579 +0.9 2.1 hypothetical protein compare
Echvi_0621 +0.9 8.1 gliding motility-associated protein GldM compare
Echvi_0169 +0.9 7.9 hypothetical protein compare
Echvi_1492 +0.9 3.7 hypothetical protein compare
Echvi_0090 +0.9 1.3 Iron-sulfur cluster assembly accessory protein compare
Echvi_0024 +0.8 2.9 Protein of unknown function (DUF1684). compare
Echvi_1224 +0.8 6.9 gliding motility-associated lipoprotein GldD compare
Echvi_2266 +0.8 7.3 Alanine dehydrogenase compare
Echvi_1139 +0.8 6.6 Putative regulator of cell autolysis compare
Echvi_0484 +0.8 1.5 hypothetical protein compare
Echvi_0955 +0.8 7.6 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_2779 +0.8 3.1 hypothetical protein compare
Echvi_1525 +0.8 6.0 hypothetical protein compare
Echvi_1319 +0.8 7.3 gliding motility-associated lipoprotein GldB compare
Echvi_1761 +0.8 4.9 hypothetical protein compare
Echvi_1760 +0.8 3.1 preprotein translocase, YajC subunit compare
Echvi_0300 +0.8 6.0 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_1311 +0.7 6.6 gliding motility-associated lipoprotein GldJ compare
Echvi_0674 +0.7 6.2 hypothetical protein compare
Echvi_0744 +0.7 4.1 glycine dehydrogenase (decarboxylating) compare
Echvi_4361 +0.7 2.9 hypothetical protein compare
Echvi_0329 +0.7 1.7 hypothetical protein compare
Echvi_3339 +0.7 1.7 hypothetical protein compare
Echvi_1211 +0.7 5.0 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain compare
Echvi_0954 +0.7 6.2 SusD family. compare
Echvi_1332 +0.7 2.2 single-stranded-DNA-specific exonuclease RecJ compare
Echvi_2503 +0.7 2.0 hypothetical protein compare
Echvi_1821 +0.7 5.6 hypothetical protein compare
Echvi_3715 +0.7 1.6 Predicted Na+-dependent transporter compare
Echvi_2205 +0.7 6.1 hypothetical protein compare
Echvi_3291 +0.7 3.2 Predicted membrane protein compare
Echvi_4083 +0.7 6.6 hypothetical protein compare
Echvi_0046 +0.7 1.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_1078 +0.7 2.6 Protein-L-isoaspartate carboxylmethyltransferase compare
Echvi_0333 +0.7 5.7 Bacteroidetes-specific putative membrane protein compare
Echvi_4104 +0.7 1.2 hypothetical protein compare
Echvi_3745 +0.6 3.1 hypothetical protein compare
Echvi_0180 +0.6 1.2 transcription elongation factor GreA compare
Echvi_1531 +0.6 2.8 putative TIM-barrel protein, nifR3 family compare
Echvi_3639 +0.6 2.8 Methionine synthase I (cobalamin-dependent), methyltransferase domain compare
Echvi_1517 +0.6 3.7 hypothetical protein compare
Echvi_2775 +0.6 4.7 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_3889 +0.6 3.7 3-oxoacyl-(acyl-carrier-protein) synthase III compare
Echvi_1736 +0.6 1.7 hypothetical protein compare
Echvi_1365 +0.6 1.4 hypothetical protein compare
Echvi_3955 +0.6 1.1 Exonuclease VII small subunit. compare
Echvi_4362 +0.6 1.9 hypothetical protein compare
Echvi_4095 +0.6 3.3 Bacteroides conjugative transposon TraK protein compare
Echvi_0728 +0.6 1.2 hypothetical protein compare
Echvi_0007 +0.6 2.5 Cytochrome c, mono- and diheme variants compare
Echvi_1385 +0.6 1.9 Bacterial mobilisation protein (MobC). compare
Echvi_2824 +0.6 5.0 hypothetical protein compare
Echvi_0655 +0.6 4.7 hypothetical protein compare
Echvi_4500 +0.6 2.0 Predicted membrane protein compare
Echvi_4360 +0.6 2.1 hypothetical protein compare
Echvi_4342 +0.6 5.0 transporter, SSS family compare
Echvi_4358 +0.6 1.8 Bacteroides conjugative transposon TraK protein compare
Echvi_2218 +0.6 1.4 hypothetical protein compare
Echvi_3742 +0.6 3.9 Outer membrane protein compare
Echvi_0617 +0.6 5.3 hypothetical protein compare
Echvi_0624 +0.6 4.7 Bacteroidetes-specific putative membrane protein compare
Echvi_0048 +0.6 1.9 Pseudouridylate synthases, 23S RNA-specific compare
Echvi_0860 +0.6 3.7 hypothetical protein compare
Echvi_1297 +0.6 1.7 hypothetical protein compare
Echvi_4097 +0.5 3.0 hypothetical protein compare
Echvi_1638 +0.5 0.9 hypothetical protein compare
Echvi_3740 +0.5 4.5 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Echvi_3044 +0.5 2.0 hypothetical protein compare
Echvi_0511 +0.5 2.9 Superfamily II DNA and RNA helicases compare
Echvi_4677 +0.5 3.0 ABC-type Fe3+-hydroxamate transport system, periplasmic component compare
Echvi_2953 +0.5 1.4 Uncharacterized conserved protein compare
Echvi_0224 +0.5 1.8 hypothetical protein compare
Echvi_0010 +0.5 3.6 hypothetical protein compare
Echvi_3047 +0.5 4.2 Leucine Rich Repeat. compare
Echvi_4422 +0.5 3.6 Aminopeptidase N compare
Echvi_0642 +0.5 2.9 pseudouridine synthase, RluA family compare
Echvi_1108 +0.5 4.1 hypothetical protein compare
Echvi_1888 +0.5 4.5 hypothetical protein compare
Echvi_0857 +0.5 3.7 hypothetical protein compare
Echvi_0691 +0.5 4.5 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_2274 +0.5 3.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Echvi_3470 +0.5 3.0 DNA-3-methyladenine glycosylase (3mg) compare
Echvi_1759 +0.5 1.8 Protein of unknown function (DUF1573). compare
Echvi_1946 +0.5 1.3 hypothetical protein compare
Echvi_1258 +0.5 2.9 Peptide methionine sulfoxide reductase compare
Echvi_2497 +0.5 2.9 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family compare
Echvi_4079 +0.5 3.1 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Echvi_1182 +0.5 2.0 hypothetical protein compare
Echvi_2130 +0.5 2.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Echvi_4553 +0.5 1.2 hypothetical protein compare
Echvi_2917 +0.5 1.4 hypothetical protein compare
Echvi_0910 +0.5 1.9 hypothetical protein compare
Echvi_0012 +0.5 3.0 ABC-type antimicrobial peptide transport system, ATPase component compare
Echvi_1728 +0.5 0.9 pseudouridylate synthase I compare
Echvi_0203 +0.5 2.5 Transcriptional regulator compare
Echvi_1452 +0.5 2.2 dTDP-glucose pyrophosphorylase compare
Echvi_0081 +0.5 2.1 hydrolase, TatD family compare
Echvi_0199 +0.5 3.6 hypothetical protein compare
Echvi_0287 +0.5 1.6 RNA polymerase sigma factor, sigma-70 family compare
Echvi_3951 +0.5 3.0 Proline racemase compare
Echvi_3379 +0.5 3.9 hypothetical protein compare
Echvi_0334 +0.5 4.4 hypothetical protein compare
Echvi_3140 +0.5 1.9 single stranded DNA-binding protein (ssb) compare
Echvi_3594 +0.5 1.1 hypothetical protein compare
Echvi_4005 +0.5 2.3 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Echvi_0538 +0.5 2.4 hypothetical protein compare
Echvi_1827 +0.5 3.2 aspartate kinase compare
Echvi_1103 +0.5 4.0 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_1023 +0.5 1.9 hypothetical protein compare
Echvi_0011 +0.4 2.8 ABC-type transport system, involved in lipoprotein release, permease component compare
Echvi_0733 +0.4 3.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_1272 +0.4 1.8 Protein of unknown function (DUF2442). compare
Echvi_3381 +0.4 4.2 Pregnancy-associated plasma protein-A. compare
Echvi_0173 +0.4 1.5 hypothetical protein compare
Echvi_2829 +0.4 4.2 hypothetical protein compare
Echvi_2868 +0.4 1.4 hypothetical protein compare
Echvi_4583 +0.4 2.6 Aspartate/tyrosine/aromatic aminotransferase compare
Echvi_1765 +0.4 0.8 Cell wall-associated hydrolases (invasion-associated proteins) compare
Echvi_0750 +0.4 1.6 hypothetical protein compare
Echvi_4674 +0.4 0.7 Nucleotidyltransferase substrate binding protein like. compare
Echvi_4343 +0.4 2.8 Dihydrodipicolinate synthase/N-acetylneuraminate lyase compare
Echvi_4074 +0.4 3.3 Tetratricopeptide repeat. compare
Echvi_0328 +0.4 2.3 hypothetical protein compare
Echvi_0197 +0.4 1.1 hypothetical protein compare
Echvi_2054 +0.4 1.5 hypothetical protein compare
Echvi_0260 +0.4 1.6 Protein of unknown function (DUF3467). compare
Echvi_4414 +0.4 0.5 hypothetical protein compare
Echvi_2317 +0.4 0.8 pyruvate kinase compare
Echvi_2938 +0.4 1.6 Predicted metal-dependent hydrolase of the TIM-barrel fold compare
Echvi_1916 +0.4 1.6 hypothetical protein compare
Echvi_3824 +0.4 0.9 hypothetical protein compare
Echvi_2108 +0.4 1.0 Predicted small integral membrane protein compare
Echvi_3143 +0.4 2.2 hypothetical protein compare
Echvi_3942 +0.4 2.3 Response regulator of the LytR/AlgR family compare
Echvi_2222 +0.4 1.3 hypothetical protein compare
Echvi_1719 +0.4 0.9 hypothetical protein compare
Echvi_1166 +0.4 3.5 Aminopeptidase N compare
Echvi_2237 +0.4 1.9 hypothetical protein compare
Echvi_1510 +0.4 0.7 bacillithiol biosynthesis cysteine-adding enzyme BshC compare
Echvi_1495 +0.4 1.8 hypothetical protein compare
Echvi_0029 +0.4 2.7 DNA repair proteins compare
Echvi_1544 +0.4 1.9 META domain. compare
Echvi_3300 +0.4 1.5 hypothetical protein compare
Echvi_4098 +0.4 1.8 hypothetical protein compare
Echvi_0659 +0.4 1.8 Uncharacterized membrane protein, required for colicin V production compare
Echvi_2225 +0.4 1.0 Transposase DDE domain./Transposase domain (DUF772). compare
Echvi_1523 +0.4 2.6 Predicted permeases compare
Echvi_3433 +0.4 2.5 Activator of Hsp90 ATPase homolog 1-like protein. compare
Echvi_0211 +0.4 1.2 hypothetical protein compare
Echvi_4080 +0.4 0.6 hypothetical protein compare
Echvi_2553 +0.4 1.4 hypothetical protein compare
Echvi_3741 +0.4 2.9 RND family efflux transporter, MFP subunit compare
Echvi_2862 +0.4 1.5 glucose-6-phosphate 1-dehydrogenase compare
Echvi_4357 +0.4 1.3 Protein of unknown function (DUF3714). compare
Echvi_4534 +0.4 1.4 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 compare
Echvi_2094 +0.4 2.3 Uncharacterized conserved protein compare
Echvi_1970 +0.4 1.0 hypothetical protein compare
Echvi_2382 +0.4 1.4 primosomal protein N' compare
Echvi_0325 +0.4 1.2 Predicted transcriptional regulator with C-terminal CBS domains compare
Echvi_4265 +0.4 1.5 hypothetical protein compare
Echvi_2252 +0.4 1.9 Mg-chelatase subunit ChlD compare
Echvi_3223 +0.4 1.0 Mn-dependent transcriptional regulator compare
Echvi_2109 +0.4 2.0 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems compare
Echvi_0135 +0.4 1.8 Uncharacterized protein conserved in bacteria compare
Echvi_4334 +0.4 0.7 hypothetical protein compare
Echvi_1632 +0.4 1.9 Endoglucanase compare
Echvi_3430 +0.4 0.9 hypothetical protein compare
Echvi_3954 +0.4 1.7 exodeoxyribonuclease VII, large subunit compare
Echvi_3726 +0.4 1.2 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Echvi_0345 +0.4 1.7 hypothetical protein compare
Echvi_1136 +0.4 1.1 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases compare


Specific Phenotypes

None in this experiment

For Echinicola vietnamensis KMM 6221, DSM 17526 in stress experiments

For stress Sodium perchlorate monohydrate across organisms