Experiment set1IT073 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Sodium perchlorate monohydrate 25 mM

200 most detrimental genes:

  gene name fitness t score description  
Echvi_0986 +1.8 9.0 Rrf2 family protein compare
Echvi_0096 +1.3 2.5 Predicted pyrophosphatase compare
Echvi_3193 +1.2 2.4 hypothetical protein compare
Echvi_2937 +1.2 3.1 Uncharacterized conserved protein compare
Echvi_2554 +1.2 1.7 hypothetical protein compare
Echvi_1020 +1.2 1.6 hypothetical protein compare
Echvi_1516 +1.2 3.2 hypothetical protein compare
Echvi_1227 +1.1 1.8 hypothetical protein compare
Echvi_4640 +1.1 1.3 hypothetical protein compare
Echvi_4553 +1.1 2.4 hypothetical protein compare
Echvi_0222 +1.0 4.6 hypothetical protein compare
Echvi_1865 +1.0 1.7 hypothetical protein compare
Echvi_1946 +1.0 2.5 hypothetical protein compare
Echvi_3813 +1.0 2.8 Uncharacterized protein conserved in bacteria compare
Echvi_1239 +0.9 2.6 DNA-binding regulatory protein, YebC/PmpR family compare
Echvi_3142 +0.9 1.4 hypothetical protein compare
Echvi_2238 +0.9 2.5 hypothetical protein compare
Echvi_2108 +0.8 1.4 Predicted small integral membrane protein compare
Echvi_1742 +0.8 1.3 Uncharacterized protein conserved in archaea compare
Echvi_1342 +0.8 2.0 Predicted endonuclease containing a URI domain compare
Echvi_0291 +0.8 1.5 hypothetical protein compare
Echvi_3934 +0.8 2.2 hypothetical protein compare
Echvi_0955 +0.8 7.1 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_0954 +0.7 6.3 SusD family. compare
Echvi_0224 +0.7 2.8 hypothetical protein compare
Echvi_0745 +0.7 5.9 Predicted aminopeptidases compare
Echvi_0342 +0.7 1.0 ATP-dependent DNA helicase, RecQ family compare
Echvi_4099 +0.7 1.6 hypothetical protein compare
Echvi_0641 +0.7 0.9 Transposase and inactivated derivatives compare
Echvi_2157 +0.7 1.5 hypothetical protein compare
Echvi_2713 +0.7 2.3 hypothetical protein compare
Echvi_1758 +0.7 3.1 Gas vesicle protein compare
Echvi_3109 +0.7 2.5 hypothetical protein compare
Echvi_4666 +0.7 2.0 Cold shock proteins compare
Echvi_2317 +0.7 0.6 pyruvate kinase compare
Echvi_1297 +0.7 1.5 hypothetical protein compare
Echvi_3648 +0.7 2.4 hypothetical protein compare
Echvi_0329 +0.7 1.7 hypothetical protein compare
Echvi_0168 +0.7 1.0 Uncharacterized homolog of PSP1 compare
Echvi_1930 +0.7 1.1 DNA repair proteins compare
Echvi_2868 +0.7 1.5 hypothetical protein compare
Echvi_2503 +0.6 1.4 hypothetical protein compare
Echvi_1950 +0.6 1.4 hypothetical protein compare
Echvi_1195 +0.6 3.1 Uncharacterized protein conserved in bacteria compare
Echvi_0851 +0.6 1.7 Uncharacterized conserved protein compare
Echvi_0161 +0.6 2.6 Exopolyphosphatase compare
Echvi_4342 +0.6 5.1 transporter, SSS family compare
Echvi_1492 +0.6 1.1 hypothetical protein compare
Echvi_2683 +0.6 1.6 hypothetical protein compare
Echvi_1728 +0.6 1.4 pseudouridylate synthase I compare
Echvi_4645 +0.6 1.5 GTP-binding protein LepA compare
Echvi_0298 +0.6 4.9 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_2252 +0.6 2.4 Mg-chelatase subunit ChlD compare
Echvi_3068 +0.6 1.3 hypothetical protein compare
Echvi_4376 +0.6 2.7 hypothetical protein compare
Echvi_2221 +0.6 2.2 Protein of unknown function (DUF1573). compare
Echvi_3757 +0.6 1.5 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase compare
Echvi_2443 +0.6 1.4 hypothetical protein compare
Echvi_2958 +0.6 4.0 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Echvi_2194 +0.6 2.3 ADP-ribose pyrophosphatase compare
Echvi_1761 +0.6 3.4 hypothetical protein compare
Echvi_4188 +0.6 2.8 hypothetical protein compare
Echvi_1733 +0.6 2.2 RNA polymerase sigma factor, sigma-70 family compare
Echvi_3552 +0.5 2.6 hypothetical protein compare
Echvi_3304 +0.5 2.4 3-hydroxyacyl-CoA dehydrogenase compare
Echvi_2700 +0.5 3.1 Acyl-CoA hydrolase compare
Echvi_0720 +0.5 1.3 hypothetical protein compare
Echvi_2219 +0.5 1.6 ADP-ribose pyrophosphatase compare
Echvi_2860 +0.5 1.2 sugar-phosphate isomerases, RpiB/LacA/LacB family compare
Echvi_4079 +0.5 3.2 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Echvi_1493 +0.5 1.3 hypothetical protein compare
Echvi_3805 +0.5 2.1 Sugar transferases involved in lipopolysaccharide synthesis compare
Echvi_3377 +0.5 1.8 Uncharacterized protein conserved in bacteria compare
Echvi_0833 +0.5 1.8 hypothetical protein compare
Echvi_4234 +0.5 1.8 Predicted membrane protein compare
Echvi_4093 +0.5 2.0 Bacteroides conjugative transposon TraM protein compare
Echvi_0299 +0.5 3.5 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_3758 +0.5 2.4 Predicted ATPases of PP-loop superfamily compare
Echvi_4161 +0.5 0.6 hypothetical protein compare
Echvi_4506 +0.5 2.4 Gluconolactonase compare
Echvi_0622 +0.5 2.6 gliding motility-associated protein GldL compare
Echvi_0102 +0.5 1.6 Uncharacterized conserved protein compare
Echvi_3764 +0.5 1.0 Predicted transcriptional regulators compare
Echvi_1743 +0.5 1.6 alpha-L-glutamate ligases, RimK family compare
Echvi_2198 +0.5 1.3 hypothetical protein compare
Echvi_4551 +0.5 1.8 hypothetical protein compare
Echvi_1987 +0.5 1.7 recombination protein RecR compare
Echvi_2775 +0.5 2.8 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_0056 +0.5 2.1 Predicted O-methyltransferase compare
Echvi_4588 +0.5 2.3 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Echvi_1271 +0.5 2.1 hypothetical protein compare
Echvi_2365 +0.5 1.0 Response regulator containing a CheY-like receiver domain and an HD-GYP domain compare
Echvi_4124 +0.5 1.3 Copper chaperone compare
Echvi_0300 +0.5 3.0 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_0219 +0.5 1.6 hypothetical protein compare
Echvi_0861 +0.5 1.5 hypothetical protein compare
Echvi_2376 +0.5 3.0 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Echvi_1835 +0.5 2.2 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Echvi_0621 +0.5 4.2 gliding motility-associated protein GldM compare
Echvi_1745 +0.5 2.6 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_4114 +0.5 1.6 hypothetical protein compare
Echvi_4383 +0.5 0.6 hypothetical protein compare
Echvi_3221 +0.5 1.9 hypothetical protein compare
Echvi_0744 +0.4 2.4 glycine dehydrogenase (decarboxylating) compare
Echvi_1628 +0.4 1.4 hypothetical protein compare
Echvi_4218 +0.4 1.3 RND family efflux transporter, MFP subunit compare
Echvi_1759 +0.4 1.7 Protein of unknown function (DUF1573). compare
Echvi_4466 +0.4 2.9 Co/Zn/Cd efflux system component compare
Echvi_1732 +0.4 1.0 hypothetical protein compare
Echvi_0718 +0.4 0.5 segregation and condensation protein B compare
Echvi_3071 +0.4 3.0 Mannitol-1-phosphate/altronate dehydrogenases compare
Echvi_1531 +0.4 1.9 putative TIM-barrel protein, nifR3 family compare
Echvi_0511 +0.4 1.6 Superfamily II DNA and RNA helicases compare
Echvi_0048 +0.4 1.2 Pseudouridylate synthases, 23S RNA-specific compare
Echvi_0732 +0.4 0.8 hypothetical protein compare
Echvi_3272 +0.4 1.3 3-oxoacid CoA-transferase, A subunit compare
Echvi_0260 +0.4 1.2 Protein of unknown function (DUF3467). compare
Echvi_4364 +0.4 1.0 hypothetical protein compare
Echvi_0345 +0.4 2.5 hypothetical protein compare
Echvi_1254 +0.4 1.0 hypothetical protein compare
Echvi_0091 +0.4 0.9 glycine cleavage system T protein compare
Echvi_1451 +0.4 1.9 Predicted membrane protein compare
Echvi_4052 +0.4 2.0 Uncharacterized conserved protein compare
Echvi_2570 +0.4 2.0 Protein of unknown function (DUF664). compare
Echvi_4307 +0.4 2.1 Uncharacterized protein conserved in bacteria compare
Echvi_3365 +0.4 2.0 Transcriptional regulator compare
Echvi_3223 +0.4 0.8 Mn-dependent transcriptional regulator compare
Echvi_0620 +0.4 3.3 gliding motility associated protien GldN compare
Echvi_0750 +0.4 0.8 hypothetical protein compare
Echvi_2856 +0.4 2.0 hypothetical protein compare
Echvi_0615 +0.4 1.7 Integral membrane protein CcmA involved in cell shape determination compare
Echvi_3091 +0.4 1.6 Malate/L-lactate dehydrogenases compare
Echvi_1850 +0.4 2.7 Bacterial SH3 domain. compare
Echvi_0169 +0.4 3.2 hypothetical protein compare
Echvi_4285 +0.4 1.5 hypothetical protein compare
Echvi_4229 +0.4 1.7 Uncharacterized conserved protein compare
Echvi_0186 +0.4 0.8 Predicted metal-binding, possibly nucleic acid-binding protein compare
Echvi_3372 +0.4 1.5 Predicted membrane protein compare
Echvi_4305 +0.4 1.4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_0012 +0.4 2.6 ABC-type antimicrobial peptide transport system, ATPase component compare
Echvi_1093 +0.4 1.3 hypothetical protein compare
Echvi_1176 +0.4 1.9 MazG family protein compare
Echvi_0577 +0.4 2.2 Ornithine aminotransferase (EC 2.6.1.13) (from data) compare
Echvi_2359 +0.4 0.5 hypothetical protein compare
Echvi_0943 +0.4 1.4 hypothetical protein compare
Echvi_1491 +0.4 0.9 export-related chaperone CsaA compare
Echvi_1900 +0.4 1.4 nitrite reductase [NAD(P)H], small subunit compare
Echvi_3622 +0.4 1.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Echvi_3761 +0.4 0.9 Fructose-2,6-bisphosphatase compare
Echvi_3704 +0.4 2.0 hypothetical protein compare
Echvi_0025 +0.4 1.1 DNA repair proteins compare
Echvi_2286 +0.4 1.6 hypothetical protein compare
Echvi_4155 +0.4 1.8 DNA repair proteins compare
Echvi_4244 +0.4 1.5 hypothetical protein compare
Echvi_0095 +0.4 1.9 3-oxoacyl-(acyl-carrier-protein) synthase compare
Echvi_1091 +0.4 1.8 Predicted divalent heavy-metal cations transporter compare
Echvi_1272 +0.4 1.4 Protein of unknown function (DUF2442). compare
Echvi_1224 +0.4 2.9 gliding motility-associated lipoprotein GldD compare
Echvi_3322 +0.4 1.7 hypothetical protein compare
Echvi_3533 +0.4 1.7 6-phospho 3-hexuloisomerase compare
Echvi_3880 +0.4 1.8 hypothetical protein compare
Echvi_4467 +0.4 2.0 Uncharacterized conserved protein compare
Echvi_0691 +0.4 3.2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_1497 +0.4 2.5 NAD-dependent aldehyde dehydrogenases compare
Echvi_0862 +0.4 2.6 Glutamate dehydrogenase/leucine dehydrogenase compare
Echvi_2922 +0.4 1.9 Predicted dehydrogenases and related proteins compare
Echvi_3833 +0.4 2.3 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
Echvi_2266 +0.4 2.8 Alanine dehydrogenase compare
Echvi_0659 +0.4 1.6 Uncharacterized membrane protein, required for colicin V production compare
Echvi_4545 +0.4 1.3 hypothetical protein compare
Echvi_2253 +0.4 2.2 hypothetical protein compare
Echvi_0163 +0.4 1.5 Predicted redox protein, regulator of disulfide bond formation compare
Echvi_4074 +0.4 2.5 Tetratricopeptide repeat. compare
Echvi_2421 +0.4 1.9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_1688 +0.4 1.6 Predicted metal-dependent hydrolase of the TIM-barrel fold compare
Echvi_2240 +0.4 1.7 Glycosyltransferase family 28 C-terminal domain. compare
Echvi_4579 +0.4 1.1 hypothetical protein compare
Echvi_3723 +0.4 0.7 hypothetical protein compare
Echvi_3702 +0.4 1.3 von Willebrand factor type A domain. compare
Echvi_3298 +0.4 1.6 Polyketide cyclase / dehydrase and lipid transport. compare
Echvi_2640 +0.4 1.4 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Echvi_3765 +0.4 1.6 hypothetical protein compare
Echvi_1517 +0.3 2.3 hypothetical protein compare
Echvi_3172 +0.3 1.1 hypothetical protein compare
Echvi_0895 +0.3 1.7 hypothetical protein compare
Echvi_0799 +0.3 1.7 Uncharacterized conserved protein compare
Echvi_4297 +0.3 2.2 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Echvi_0543 +0.3 1.4 hypothetical protein compare
Echvi_4631 +0.3 2.2 (p)ppGpp synthetase, RelA/SpoT family compare
Echvi_3995 +0.3 0.6 hypothetical protein compare
Echvi_0623 +0.3 3.0 gliding motility-associated lipoprotein GldK compare
Echvi_1831 +0.3 1.2 Fe2+/Zn2+ uptake regulation proteins compare
Echvi_3889 +0.3 1.4 3-oxoacyl-(acyl-carrier-protein) synthase III compare
Echvi_3317 +0.3 1.7 hypothetical protein compare
Echvi_4405 +0.3 1.5 hypothetical protein compare
Echvi_4252 +0.3 1.7 hypothetical protein compare
Echvi_1087 +0.3 1.8 Acetyltransferase (isoleucine patch superfamily) compare
Echvi_0875 +0.3 0.9 hypothetical protein compare
Echvi_4422 +0.3 2.1 Aminopeptidase N compare
Echvi_4582 +0.3 0.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium perchlorate monohydrate in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Sodium perchlorate monohydrate across organisms