Experiment set1IT072 for Magnetospirillum magneticum AMB-1

Compare to:

30_nonmag_1

200 most important genes:

  gene name fitness t score description  
AMB_RS15295 -2.2 -3.1 iron donor protein CyaY compare
AMB_RS00355 -2.0 -9.7 radical SAM protein compare
AMB_RS00010 -1.9 -2.2 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS14525 -1.9 -1.2 xylanase/chitin deacetylase compare
AMB_RS03205 -1.8 -2.5 DNA recombination/repair protein RecA compare
AMB_RS21290 -1.8 -1.9 DUF4139 domain-containing protein compare
AMB_RS03110 -1.7 -1.7 membrane protein compare
AMB_RS07010 -1.7 -7.3 ATP-dependent helicase compare
AMB_RS19880 -1.6 -4.0 site-specific tyrosine recombinase XerD compare
AMB_RS11195 -1.6 -1.7 sulfate adenylyltransferase subunit 2 compare
AMB_RS19545 -1.6 -3.3 elongation factor 4 compare
AMB_RS19790 -1.5 -3.6 NAD(P)-dependent oxidoreductase compare
AMB_RS05990 -1.4 -2.4 hypothetical protein compare
AMB_RS04280 -1.3 -10.0 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS14035 -1.3 -4.5 endopeptidase La compare
AMB_RS20120 -1.2 -2.9 VOC family protein compare
AMB_RS22325 -1.2 -5.7 4Fe-4S binding domain-containing protein compare
AMB_RS16705 -1.2 -1.5 LysR family transcriptional regulator compare
AMB_RS10475 -1.2 -1.3 transcriptional regulator NrdR compare
AMB_RS16025 -1.2 -5.8 MFS transporter compare
AMB_RS12395 -1.1 -1.3 succinate dehydrogenase assembly factor 2 compare
AMB_RS21385 -1.1 -3.5 helix-turn-helix transcriptional regulator compare
AMB_RS20350 -1.1 -4.1 aspartate 1-decarboxylase compare
AMB_RS22315 -1.1 -4.6 membrane protein compare
AMB_RS18145 -1.1 -3.6 GntR family transcriptional regulator compare
AMB_RS05085 -1.0 -2.4 hemerythrin compare
AMB_RS17795 -1.0 -0.7 hypothetical protein compare
AMB_RS00800 -0.9 -4.4 nucleoside-diphosphate-sugar pyrophosphorylase compare
AMB_RS00815 -0.9 -5.9 hypothetical protein compare
AMB_RS22800 -0.9 -2.3 glutathione synthase compare
AMB_RS14290 -0.9 -5.2 exopolyphosphatase compare
AMB_RS24445 -0.9 -3.0 hypothetical protein compare
AMB_RS16180 -0.9 -1.4 DUF4405 domain-containing protein compare
AMB_RS11780 -0.9 -5.8 glutamate synthase subunit beta compare
AMB_RS20020 -0.9 -1.6 cell division protein ZapE compare
AMB_RS00795 -0.9 -6.5 LPS biosynthesis protein compare
AMB_RS01605 -0.9 -1.5 aspartate aminotransferase family protein compare
AMB_RS20740 -0.9 -6.7 hypothetical protein compare
AMB_RS06755 -0.9 -1.9 hypothetical protein compare
AMB_RS03655 -0.8 -3.7 hypothetical protein compare
AMB_RS07745 -0.8 -1.7 disulfide bond formation protein B compare
AMB_RS00805 -0.8 -6.1 haloacid dehalogenase compare
AMB_RS03725 -0.8 -3.8 DNA helicase II compare
AMB_RS12785 -0.8 -2.5 murein transglycosylase compare
AMB_RS12295 -0.8 -1.4 TatD family deoxyribonuclease compare
AMB_RS02485 -0.8 -2.1 hypothetical protein compare
AMB_RS00810 -0.8 -3.5 hypothetical protein compare
AMB_RS04510 -0.8 -2.2 ferrous iron transporter compare
AMB_RS11185 -0.8 -6.5 nitrite/sulfite reductase compare
AMB_RS22565 -0.8 -6.0 MucR family transcriptional regulator compare
AMB_RS00180 -0.7 -3.5 hypothetical protein compare
AMB_RS07865 -0.7 -3.5 ATP-dependent chaperone ClpB compare
AMB_RS18930 -0.7 -0.7 Flp pilus assembly protein CpaB compare
AMB_RS12935 -0.7 -0.7 hypothetical protein compare
AMB_RS02125 -0.7 -0.8 LemA family protein compare
AMB_RS18015 -0.7 -2.2 ABC transporter ATP-binding protein compare
AMB_RS21310 -0.7 -1.1 zinc-finger domain-containing protein compare
AMB_RS18915 -0.7 -2.3 Flp family type IVb pilin compare
AMB_RS14620 -0.7 -1.8 ArsR family transcriptional regulator compare
AMB_RS04360 -0.7 -1.2 thiosulfate oxidation carrier protein SoxY compare
AMB_RS03510 -0.7 -3.7 flagellin-like protein compare
AMB_RS11100 -0.7 -4.0 membrane protein compare
AMB_RS21665 -0.7 -1.3 hypothetical protein compare
AMB_RS07100 -0.7 -1.6 Lrp/AsnC family transcriptional regulator compare
AMB_RS24680 -0.7 -2.2 hypothetical protein compare
AMB_RS20595 -0.7 -1.8 ribosome maturation factor compare
AMB_RS08580 -0.7 -1.3 hypothetical protein compare
AMB_RS14175 -0.7 -0.8 COQ9 family protein compare
AMB_RS08695 -0.7 -1.3 hypothetical protein compare
AMB_RS00480 -0.7 -3.8 methyltransferase domain-containing protein compare
AMB_RS22280 -0.7 -4.8 hypothetical protein compare
AMB_RS03135 -0.7 -1.6 NADP-dependent isocitrate dehydrogenase compare
AMB_RS19565 -0.7 -2.2 peptidase M23 compare
AMB_RS24000 -0.7 -0.8 glycosyltransferase family 1 protein compare
AMB_RS07115 -0.7 -1.5 Lrp/AsnC family transcriptional regulator compare
AMB_RS15550 -0.6 -2.9 copper chaperone PCu(A)C compare
AMB_RS04690 -0.6 -1.7 hypothetical protein compare
AMB_RS21725 -0.6 -2.9 hemerythrin compare
AMB_RS10350 -0.6 -1.6 DNA polymerase III subunit epsilon compare
AMB_RS04680 -0.6 -1.4 transposase compare
AMB_RS22085 -0.6 -6.0 cytochrome c oxidase accessory protein CcoG compare
AMB_RS07110 -0.6 -1.2 Lrp/AsnC family transcriptional regulator compare
AMB_RS03610 -0.6 -3.4 transcription elongation factor GreA compare
AMB_RS16100 -0.6 -2.5 RNA polymerase sigma factor RpoH compare
AMB_RS04685 -0.6 -2.3 DNA-binding response regulator compare
AMB_RS00160 -0.6 -3.1 hypothetical protein compare
AMB_RS14025 -0.6 -1.1 tRNA-Val compare
AMB_RS03615 -0.6 -3.3 hypothetical protein compare
AMB_RS23015 -0.6 -1.6 septum formation protein Maf compare
AMB_RS12390 -0.6 -3.7 transcription-repair coupling factor compare
AMB_RS19115 -0.6 -1.8 hypothetical protein compare
AMB_RS23955 -0.6 -3.7 hypothetical protein compare
AMB_RS14270 -0.6 -1.6 response regulator compare
AMB_RS01855 -0.6 -1.5 hypothetical protein compare
AMB_RS23500 -0.6 -2.7 hypothetical protein compare
AMB_RS05090 -0.6 -2.5 hypothetical protein compare
AMB_RS07700 -0.6 -1.2 hypothetical protein compare
AMB_RS02045 -0.6 -2.9 hypothetical protein compare
AMB_RS22150 -0.6 -0.8 MarR family transcriptional regulator compare
AMB_RS11775 -0.6 -5.1 glutamate synthase large subunit compare
AMB_RS11190 -0.5 -2.3 phosphoadenylyl-sulfate reductase compare
AMB_RS03835 -0.5 -1.0 YicC family protein compare
AMB_RS21025 -0.5 -3.8 DUF3422 domain-containing protein compare
AMB_RS05510 -0.5 -3.3 glycosyltransferase compare
AMB_RS11180 -0.5 -2.4 rhodanese-like domain-containing protein compare
AMB_RS05805 -0.5 -2.4 hypothetical protein compare
AMB_RS01770 -0.5 -1.3 XRE family transcriptional regulator compare
AMB_RS01305 -0.5 -2.9 protocatechuate 4,5-dioxygenase subunit alpha compare
AMB_RS07760 -0.5 -2.2 DUF1476 domain-containing protein compare
AMB_RS23245 -0.5 -0.7 Ni,Fe-hydrogenase maturation factor compare
AMB_RS12320 -0.5 -1.5 septal ring lytic transglycosylase RlpA family protein compare
AMB_RS12410 -0.5 -3.1 excinuclease ABC subunit UvrA compare
AMB_RS22810 -0.5 -0.6 hypothetical protein compare
AMB_RS21750 -0.5 -1.1 DNA-binding response regulator compare
AMB_RS20015 -0.5 -3.9 exopolyphosphatase compare
AMB_RS12190 -0.5 -1.3 hypothetical protein compare
AMB_RS12090 -0.5 -1.5 hypothetical protein compare
AMB_RS10705 -0.5 -1.1 hypothetical protein compare
AMB_RS00855 -0.5 -2.5 helix-turn-helix domain-containing protein compare
AMB_RS23950 -0.5 -2.1 hemerythrin compare
AMB_RS15975 -0.5 -2.9 hypothetical protein compare
AMB_RS07600 -0.5 -1.6 hypothetical protein compare
AMB_RS07075 -0.5 -2.9 cytochrome c-552 precursor compare
AMB_RS10120 -0.5 -0.9 DUF1476 domain-containing protein compare
AMB_RS16955 -0.5 -1.6 Crp/Fnr family transcriptional regulator compare
AMB_RS00080 -0.5 -1.7 ammonium transporter compare
AMB_RS05095 -0.5 -2.7 hemerythrin compare
AMB_RS16860 -0.5 -1.0 DUF4113 domain-containing protein compare
AMB_RS10465 -0.5 -1.3 DUF3572 domain-containing protein compare
AMB_RS23910 -0.5 -2.3 DUF1465 domain-containing protein compare
AMB_RS19750 -0.5 -3.1 3-hydroxybutyryl-CoA dehydrogenase compare
AMB_RS24510 -0.5 -2.1 hypothetical protein compare
AMB_RS16615 -0.5 -2.0 hypothetical protein compare
AMB_RS23095 -0.5 -2.9 class I SAM-dependent methyltransferase compare
AMB_RS15310 -0.5 -2.1 adenylate/guanylate cyclase domain-containing protein compare
AMB_RS18590 -0.5 -0.9 glycosyltransferase family 2 protein compare
AMB_RS19255 -0.5 -3.5 excinuclease ABC subunit UvrB compare
AMB_RS09120 -0.5 -1.4 ABC transporter ATP-binding protein compare
AMB_RS13915 -0.5 -3.7 DNA-binding response regulator compare
AMB_RS05765 -0.5 -0.6 hypothetical protein compare
AMB_RS16130 -0.5 -1.0 phosphoglycerate dehydrogenase compare
AMB_RS13150 -0.5 -1.8 electron transport complex subunit RsxA compare
AMB_RS07065 -0.5 -2.5 Crp/Fnr family transcriptional regulator compare
AMB_RS12615 -0.5 -0.9 phytoene/squalene synthetase compare
AMB_RS09150 -0.5 -1.1 Cu(I)-responsive transcriptional regulator compare
AMB_RS24515 -0.5 -2.2 hypothetical protein compare
AMB_RS13475 -0.5 -1.6 DUF1192 domain-containing protein compare
AMB_RS23435 -0.5 -1.7 GGDEF domain-containing protein compare
AMB_RS24620 -0.5 -2.0 hypothetical protein compare
AMB_RS17400 -0.4 -1.6 esterase compare
AMB_RS21710 -0.4 -2.0 hypothetical protein compare
AMB_RS05670 -0.4 -0.7 response regulator compare
AMB_RS10915 -0.4 -1.0 hypothetical protein compare
AMB_RS07230 -0.4 -1.4 response regulator compare
AMB_RS06200 -0.4 -0.9 Crp/Fnr family transcriptional regulator compare
AMB_RS08500 -0.4 -2.3 iron permease compare
AMB_RS07870 -0.4 -2.1 nitrogenase stabilizing/protective protein nifW compare
AMB_RS20145 -0.4 -1.1 chromosome segregation ATPase compare
AMB_RS19340 -0.4 -0.6 EamA family transporter compare
AMB_RS08840 -0.4 -1.5 transcriptional regulator compare
AMB_RS19210 -0.4 -1.4 hypothetical protein compare
AMB_RS16835 -0.4 -1.5 hypothetical protein compare
AMB_RS08155 -0.4 -1.2 DUF4115 domain-containing protein compare
AMB_RS24520 -0.4 -2.6 phosphodiesterase compare
AMB_RS12590 -0.4 -2.6 tetratricopeptide repeat protein compare
AMB_RS12290 -0.4 -1.6 MBL fold metallo-hydrolase compare
AMB_RS02880 -0.4 -1.3 hypothetical protein compare
AMB_RS02685 -0.4 -3.3 glutamate synthase large subunit compare
AMB_RS01310 -0.4 -2.6 protocatechuate 3,4-dioxygenase subunit beta compare
AMB_RS21050 -0.4 -0.8 CoA pyrophosphatase compare
AMB_RS12655 -0.4 -2.4 DUF815 domain-containing protein compare
AMB_RS23065 -0.4 -1.3 hypothetical protein compare
AMB_RS10265 -0.4 -2.0 hypothetical protein compare
AMB_RS12185 -0.4 -0.9 hypothetical protein compare
AMB_RS14635 -0.4 -1.3 hypothetical protein compare
AMB_RS22770 -0.4 -1.4 radical SAM protein compare
AMB_RS01190 -0.4 -2.0 UbiD family decarboxylase compare
AMB_RS00710 -0.4 -2.4 cupin domain-containing protein compare
AMB_RS23915 -0.4 -1.1 XRE family transcriptional regulator compare
AMB_RS19965 -0.4 -1.2 lysine transporter LysE compare
AMB_RS18330 -0.4 -2.4 glycosyl transferase family protein compare
AMB_RS18830 -0.4 -2.3 cytidylate kinase-like family protein compare
AMB_RS14140 -0.4 -1.2 hypothetical protein compare
AMB_RS14185 -0.4 -1.9 HAMP domain-containing protein compare
AMB_RS23155 -0.4 -1.0 two-component sensor histidine kinase compare
AMB_RS12855 -0.4 -1.1 hypothetical protein compare
AMB_RS17800 -0.4 -1.7 anti-sigma factor antagonist compare
AMB_RS17615 -0.4 -1.8 PDZ domain-containing protein compare
AMB_RS10580 -0.4 -1.3 hypothetical protein compare
AMB_RS00745 -0.4 -1.2 MFS transporter compare
AMB_RS11015 -0.4 -1.7 XRE family transcriptional regulator compare
AMB_RS05180 -0.4 -2.1 MerR family DNA-binding transcriptional regulator compare
AMB_RS01655 -0.4 -0.7 hypothetical protein compare
AMB_RS19240 -0.4 -2.6 UvrABC system protein C compare
AMB_RS09860 -0.4 -1.0 hypothetical protein compare
AMB_RS04040 -0.4 -2.0 phosphatase compare
AMB_RS13815 -0.4 -0.9 hypothetical protein compare
AMB_RS13280 -0.4 -2.0 hybrid sensor histidine kinase/response regulator compare
AMB_RS00045 -0.4 -2.1 thioredoxin compare
AMB_RS03175 -0.4 -1.4 flagellar hook-basal body protein FliE compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms