Experiment set1IT072 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Sodium Chlorite 0.3 mM

200 most detrimental genes:

  gene name fitness t score description  
Echvi_1293 +1.5 9.2 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_1292 +1.5 10.0 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_1607 +1.3 2.7 Acylphosphatases compare
Echvi_3872 +1.1 2.0 SnoaL-like polyketide cyclase. compare
Echvi_3670 +1.1 2.4 hypothetical protein compare
Echvi_0180 +1.1 1.7 transcription elongation factor GreA compare
Echvi_0727 +1.1 1.7 hypothetical protein compare
Echvi_1742 +1.1 1.7 Uncharacterized protein conserved in archaea compare
Echvi_4561 +1.0 2.1 hypothetical protein compare
Echvi_2428 +1.0 1.8 iojap-like ribosome-associated protein compare
Echvi_3451 +0.9 2.4 hypothetical protein compare
Echvi_2246 +0.9 1.9 hypothetical protein compare
Echvi_3712 +0.9 2.3 hypothetical protein compare
Echvi_1854 +0.9 2.1 tRNA compare
Echvi_0168 +0.8 2.3 Uncharacterized homolog of PSP1 compare
Echvi_3818 +0.8 1.2 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases compare
Echvi_4582 +0.8 2.6 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_3075 +0.8 1.1 hypothetical protein compare
Echvi_4099 +0.7 1.2 hypothetical protein compare
Echvi_1881 +0.7 1.4 ADP-ribose pyrophosphatase compare
Echvi_0757 +0.7 1.9 hypothetical protein compare
Echvi_3046 +0.7 3.5 hypothetical protein compare
Echvi_4674 +0.7 1.5 Nucleotidyltransferase substrate binding protein like. compare
Echvi_3246 +0.7 2.0 hypothetical protein compare
Echvi_1764 +0.7 2.2 hypothetical protein compare
Echvi_4588 +0.7 3.5 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) compare
Echvi_0048 +0.7 2.4 Pseudouridylate synthases, 23S RNA-specific compare
Echvi_4268 +0.7 2.6 hypothetical protein compare
Echvi_3956 +0.7 2.6 Transcriptional regulator compare
Echvi_4055 +0.6 1.1 Uncharacterized protein involved in copper resistance compare
Echvi_2424 +0.6 2.6 hypothetical protein compare
Echvi_3172 +0.6 1.9 hypothetical protein compare
Echvi_1567 +0.6 2.1 Uncharacterized conserved protein compare
Echvi_3642 +0.6 2.4 NADH:ubiquinone oxidoreductase 24 kD subunit compare
Echvi_3871 +0.6 1.8 hypothetical protein compare
Echvi_0892 +0.6 2.0 Predicted transcriptional regulators compare
Echvi_3020 +0.6 2.3 hypothetical protein compare
Echvi_0373 +0.6 3.9 acyl-CoA thioester hydrolase, YbgC/YbaW family compare
Echvi_4416 +0.6 2.3 hypothetical protein compare
Echvi_3047 +0.6 4.8 Leucine Rich Repeat. compare
Echvi_1297 +0.6 1.5 hypothetical protein compare
Echvi_0622 +0.6 3.8 gliding motility-associated protein GldL compare
Echvi_0945 +0.6 1.7 hypothetical protein compare
Echvi_3456 +0.6 1.0 Uncharacterized protein conserved in bacteria compare
Echvi_3761 +0.6 1.2 Fructose-2,6-bisphosphatase compare
Echvi_1689 +0.6 1.4 hypothetical protein compare
Echvi_0219 +0.6 3.0 hypothetical protein compare
Echvi_2194 +0.5 2.3 ADP-ribose pyrophosphatase compare
Echvi_3870 +0.5 0.8 hypothetical protein compare
Echvi_0484 +0.5 0.7 hypothetical protein compare
Echvi_3045 +0.5 2.5 hypothetical protein compare
Echvi_3402 +0.5 2.0 hypothetical protein compare
Echvi_1827 +0.5 3.5 aspartate kinase compare
Echvi_0959 +0.5 1.5 rRNA methylases compare
Echvi_2221 +0.5 2.1 Protein of unknown function (DUF1573). compare
Echvi_3142 +0.5 0.7 hypothetical protein compare
Echvi_2317 +0.5 1.0 pyruvate kinase compare
Echvi_3112 +0.5 1.1 ABC-type hemin transport system, ATPase component compare
Echvi_0165 +0.5 3.1 KpsF/GutQ family protein compare
Echvi_2609 +0.5 2.2 Predicted xylanase/chitin deacetylase compare
Echvi_2058 +0.5 1.8 ketol-acid reductoisomerase compare
Echvi_2443 +0.5 1.8 hypothetical protein compare
Echvi_1991 +0.5 2.0 Predicted methylated DNA-protein cysteine methyltransferase compare
Echvi_1493 +0.5 0.7 hypothetical protein compare
Echvi_4274 +0.5 1.2 Predicted transcriptional regulators compare
Echvi_0293 +0.5 1.5 hypothetical protein compare
Echvi_4058 +0.5 1.7 PspC domain. compare
Echvi_0102 +0.5 1.8 Uncharacterized conserved protein compare
Echvi_1033 +0.5 1.9 hypothetical protein compare
Echvi_0813 +0.5 1.2 hypothetical protein compare
Echvi_2205 +0.4 3.7 hypothetical protein compare
Echvi_1620 +0.4 2.2 L-rhamnose 1-epimerase compare
Echvi_1765 +0.4 0.9 Cell wall-associated hydrolases (invasion-associated proteins) compare
Echvi_2627 +0.4 1.9 hypothetical protein compare
Echvi_1284 +0.4 2.0 ABC-type sugar transport system, periplasmic component compare
Echvi_4052 +0.4 2.1 Uncharacterized conserved protein compare
Echvi_0756 +0.4 2.1 hypothetical protein compare
Echvi_1206 +0.4 2.1 TIGR00730 family protein compare
Echvi_3244 +0.4 1.8 hypothetical protein compare
Echvi_3912 +0.4 2.7 SusD family. compare
Echvi_4075 +0.4 2.9 hypothetical protein compare
Echvi_3803 +0.4 2.3 Response regulator of the LytR/AlgR family compare
Echvi_2594 +0.4 2.2 methyltransferase, FkbM family compare
Echvi_3218 +0.4 1.9 Uncharacterized conserved protein compare
Echvi_2603 +0.4 1.9 Uncharacterized protein conserved in bacteria compare
Echvi_0359 +0.4 1.5 hypothetical protein compare
Echvi_0300 +0.4 3.0 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_0197 +0.4 1.2 hypothetical protein compare
Echvi_4560 +0.4 2.1 Predicted phosphatases compare
Echvi_0328 +0.4 1.9 hypothetical protein compare
Echvi_3512 +0.4 0.6 DNA binding domain, excisionase family compare
Echvi_2814 +0.4 2.7 Kef-type K+ transport systems, membrane components compare
Echvi_1196 +0.4 1.0 triosephosphate isomerase compare
Echvi_3044 +0.4 1.9 hypothetical protein compare
Echvi_2204 +0.4 2.4 ABC-type antimicrobial peptide transport system, ATPase component compare
Echvi_0620 +0.4 3.2 gliding motility associated protien GldN compare
Echvi_0318 +0.4 1.3 mraZ protein compare
Echvi_1224 +0.4 2.9 gliding motility-associated lipoprotein GldD compare
Echvi_3824 +0.4 1.1 hypothetical protein compare
Echvi_0298 +0.4 3.4 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_2503 +0.4 1.3 hypothetical protein compare
Echvi_0164 +0.4 3.3 Mannose-1-phosphate guanylyltransferase compare
Echvi_4553 +0.4 0.9 hypothetical protein compare
Echvi_3913 +0.4 2.9 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_2830 +0.4 1.4 TIGR00255 family protein compare
Echvi_3036 +0.4 1.8 Response regulator of the LytR/AlgR family compare
Echvi_4093 +0.4 1.5 Bacteroides conjugative transposon TraM protein compare
Echvi_4282 +0.4 2.1 Predicted transcriptional regulators compare
Echvi_1319 +0.4 3.4 gliding motility-associated lipoprotein GldB compare
Echvi_0098 +0.4 1.8 D-tyrosyl-tRNA(Tyr) deacylase compare
Echvi_1094 +0.4 2.2 Acetyltransferases, including N-acetylases of ribosomal proteins compare
Echvi_4579 +0.4 1.7 hypothetical protein compare
Echvi_4631 +0.4 2.6 (p)ppGpp synthetase, RelA/SpoT family compare
Echvi_4578 +0.4 2.2 RNA polymerase sigma factor, sigma-70 family compare
Echvi_2054 +0.4 0.9 hypothetical protein compare
Echvi_1455 +0.4 2.3 hypothetical protein compare
Echvi_0776 +0.4 2.8 Sterol desaturase compare
Echvi_3196 +0.4 1.5 Copper chaperone compare
Echvi_2470 +0.4 1.4 hypothetical protein compare
Echvi_1835 +0.4 1.7 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Echvi_1451 +0.4 1.3 Predicted membrane protein compare
Echvi_3915 +0.4 2.3 hypothetical protein compare
Echvi_3195 +0.4 0.6 hypothetical protein compare
Echvi_0450 +0.4 1.6 hypothetical protein compare
Echvi_0329 +0.4 1.0 hypothetical protein compare
Echvi_2631 +0.4 1.3 hypothetical protein compare
Echvi_3998 +0.4 0.9 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog compare
Echvi_1900 +0.4 1.7 nitrite reductase [NAD(P)H], small subunit compare
Echvi_0621 +0.4 3.3 gliding motility-associated protein GldM compare
Echvi_1872 +0.4 2.3 hypothetical protein compare
Echvi_4519 +0.4 2.6 Arylsulfatase A and related enzymes compare
Echvi_4659 +0.4 1.1 hypothetical protein compare
Echvi_0340 +0.4 1.3 ADP-ribose pyrophosphatase compare
Echvi_3665 +0.4 2.5 Bacteroidetes-specific putative membrane protein compare
Echvi_1266 +0.4 1.5 putative solute:sodium symporter small subunit compare
Echvi_1246 +0.4 2.3 gliding motility-associated protein GldE compare
Echvi_3215 +0.3 1.4 hypothetical protein compare
Echvi_4666 +0.3 1.0 Cold shock proteins compare
Echvi_4500 +0.3 1.5 Predicted membrane protein compare
Echvi_0722 +0.3 2.2 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Echvi_2449 +0.3 1.4 hypothetical protein compare
Echvi_4252 +0.3 1.4 hypothetical protein compare
Echvi_0489 +0.3 1.7 Uncharacterized protein conserved in bacteria compare
Echvi_0920 +0.3 1.0 hypothetical protein compare
Echvi_3805 +0.3 1.2 Sugar transferases involved in lipopolysaccharide synthesis compare
Echvi_0299 +0.3 2.8 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_4220 +0.3 1.8 Outer membrane protein/protective antigen OMA87 compare
Echvi_1093 +0.3 1.5 hypothetical protein compare
Echvi_3225 +0.3 1.9 hypothetical protein compare
Echvi_0663 +0.3 1.3 Predicted methyltransferases compare
Echvi_1348 +0.3 1.0 phage/plasmid-related protein TIGR03299 compare
Echvi_3521 +0.3 2.8 Methyltransferase domain. compare
Echvi_4360 +0.3 1.3 hypothetical protein compare
Echvi_3289 +0.3 0.9 Predicted transcriptional regulator compare
Echvi_0585 +0.3 2.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_2056 +0.3 1.7 acetolactate synthase, large subunit, biosynthetic type compare
Echvi_3150 +0.3 1.7 hypothetical protein compare
Echvi_2502 +0.3 1.2 hypothetical protein compare
Echvi_1074 +0.3 1.4 hypothetical protein compare
Echvi_3326 +0.3 1.8 Putative GTPases (G3E family) compare
Echvi_0296 +0.3 1.3 hypothetical protein compare
Echvi_1537 +0.3 1.7 hypothetical protein compare
Echvi_4510 +0.3 1.9 Cystathionine beta-lyases/cystathionine gamma-synthases compare
Echvi_4389 +0.3 3.0 hypothetical protein compare
Echvi_4265 +0.3 1.1 hypothetical protein compare
Echvi_3184 +0.3 0.9 hypothetical protein compare
Echvi_2632 +0.3 1.9 Zn-dependent hydrolases, including glyoxylases compare
Echvi_2776 +0.3 1.4 hypothetical protein compare
Echvi_3120 +0.3 1.2 hypothetical protein compare
Echvi_0275 +0.3 1.0 Acetyl/propionyl-CoA carboxylase, alpha subunit compare
Echvi_0155 +0.3 1.7 ketose-bisphosphate aldolases compare
Echvi_2290 +0.3 1.4 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Echvi_2955 +0.3 1.1 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_2271 +0.3 1.4 His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_0829 +0.3 1.0 Membrane-associated phospholipid phosphatase compare
Echvi_1487 +0.3 2.9 hypothetical protein compare
Echvi_2005 +0.3 1.5 hypothetical protein compare
Echvi_0515 +0.3 1.8 Ribulokinase (EC 2.7.1.16) (from data) compare
Echvi_3278 +0.3 1.3 hypothetical protein compare
Echvi_3310 +0.3 1.6 Predicted Fe-S-cluster oxidoreductase compare
Echvi_3001 +0.3 1.8 Predicted membrane protein compare
Echvi_1705 +0.3 1.4 hypothetical protein compare
Echvi_4589 +0.3 0.8 MoxR-like ATPases compare
Echvi_1554 +0.3 1.2 Domain of unknown function (DU1801). compare
Echvi_3537 +0.3 1.5 intracellular protease, PfpI family compare
Echvi_2525 +0.3 1.2 GTP-binding protein YchF compare
Echvi_2758 +0.3 1.5 hypothetical protein compare
Echvi_3614 +0.3 2.1 Imidazolonepropionase and related amidohydrolases compare
Echvi_4189 +0.3 1.7 Transposase. compare
Echvi_4054 +0.3 1.3 hypothetical protein compare
Echvi_3958 +0.3 1.4 hypothetical protein compare
Echvi_2310 +0.3 1.0 conserved hypothetical protein YidD compare
Echvi_4361 +0.3 1.4 hypothetical protein compare
Echvi_2004 +0.3 1.8 Predicted transcriptional regulator compare
Echvi_2285 +0.3 1.5 hypothetical protein compare
Echvi_1710 +0.3 2.1 hypothetical protein compare
Echvi_2896 +0.3 2.2 Transcriptional regulators compare
Echvi_2238 +0.3 0.9 hypothetical protein compare
Echvi_1400 +0.3 0.8 hypothetical protein compare
Echvi_2514 +0.3 1.2 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chlorite in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Sodium Chlorite across organisms