Experiment set1IT071 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Sodium Chloride 500 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_07335 +1.3 6.2 transcriptional regulator compare
CA264_06330 +1.2 2.0 cation:proton antiporter compare
CA264_07330 +1.0 6.8 hypothetical protein compare
CA264_02180 +0.8 2.0 response regulator compare
CA264_08780 +0.8 5.9 hypothetical protein compare
CA264_04045 +0.8 7.3 hypothetical protein compare
CA264_12925 +0.8 1.7 hypothetical protein compare
CA264_08105 +0.8 3.9 NupC/NupG family nucleoside CNT transporter compare
CA264_20935 +0.8 1.0 transcriptional regulator compare
CA264_20570 +0.7 1.0 inorganic pyrophosphatase compare
CA264_02635 +0.7 3.9 hypothetical protein compare
CA264_06600 +0.7 5.6 glycosyltransferase compare
CA264_03330 +0.7 1.7 peptide-methionine (R)-S-oxide reductase compare
CA264_18775 +0.7 0.9 hypothetical protein compare
CA264_16720 +0.7 2.5 hypothetical protein compare
CA264_18880 +0.7 3.2 hypothetical protein compare
CA264_19135 +0.6 1.8 hypothetical protein compare
CA264_14805 +0.6 1.2 DNA-binding protein compare
CA264_05415 +0.6 2.3 DsbA family protein compare
CA264_21225 +0.6 1.9 hypothetical protein compare
CA264_07325 +0.6 3.1 YfcE family phosphodiesterase compare
CA264_14110 +0.6 1.4 phosphoribosyltransferase compare
CA264_20465 +0.6 1.0 aspartate carbamoyltransferase compare
CA264_17095 +0.6 1.3 FeoB-associated Cys-rich membrane protein compare
CA264_10695 +0.6 1.6 anti-sigma regulatory factor compare
CA264_18410 +0.6 1.8 glycine dehydrogenase (aminomethyl-transferring) compare
CA264_14200 +0.6 1.1 NADH-quinone oxidoreductase subunit A compare
CA264_11865 +0.6 2.7 hypothetical protein compare
CA264_10325 +0.6 1.6 plasmid mobilization relaxosome protein MobC compare
CA264_05410 +0.6 2.5 hypothetical protein compare
CA264_17370 +0.5 1.9 hypothetical protein compare
CA264_19970 +0.5 0.8 hypothetical protein compare
CA264_06610 +0.5 1.7 iron-dependent repressor compare
CA264_12310 +0.5 1.1 NifU family protein compare
CA264_02055 +0.5 0.9 hypothetical protein compare
CA264_05630 +0.5 2.2 glycerol-3-phosphate dehydrogenase compare
CA264_13765 +0.5 3.2 DNA-binding transcriptional regulator OxyR compare
CA264_20320 +0.5 2.0 hypothetical protein compare
CA264_10520 +0.5 1.3 molybdopterin synthase sulfur carrier subunit compare
CA264_03850 +0.5 2.3 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase compare
CA264_10305 +0.5 0.5 hypothetical protein compare
CA264_05785 +0.5 1.1 cbb3-type cytochrome oxidase assembly protein CcoS compare
CA264_08250 +0.5 2.0 hypothetical protein compare
CA264_12860 +0.5 1.3 hypothetical protein compare
CA264_08230 +0.5 1.5 TetR family transcriptional regulator compare
CA264_18875 +0.5 1.8 N-acetyltransferase compare
CA264_14560 +0.5 1.0 VanZ family protein compare
CA264_20455 +0.5 3.2 LLM class flavin-dependent oxidoreductase compare
CA264_19630 +0.5 1.4 hypothetical protein compare
CA264_02575 +0.5 2.4 potassium transporter KefB compare
CA264_03835 +0.5 1.2 hypothetical protein compare
CA264_13020 +0.5 0.9 hypothetical protein compare
CA264_13000 +0.5 1.0 cupin compare
CA264_16240 +0.4 2.4 hypothetical protein compare
CA264_12575 +0.4 2.7 hypothetical protein compare
CA264_17530 +0.4 3.0 hemolysin compare
CA264_16295 +0.4 3.0 alkaline phosphatase family protein compare
CA264_11180 +0.4 3.1 thioredoxin family protein compare
CA264_13210 +0.4 1.7 hypothetical protein compare
CA264_10275 +0.4 1.3 transcriptional regulator compare
CA264_15005 +0.4 2.7 magnesium/cobalt efflux protein compare
CA264_08130 +0.4 1.1 antibiotic biosynthesis monooxygenase compare
CA264_13555 +0.4 1.5 hypothetical protein compare
CA264_14675 +0.4 1.4 hypothetical protein compare
CA264_21175 +0.4 2.3 STAS/SEC14 domain-containing protein compare
CA264_01435 +0.4 2.1 anti-anti-sigma factor compare
CA264_08510 +0.4 1.6 thiol oxidoreductase compare
CA264_19005 +0.4 3.4 SusC/RagA family TonB-linked outer membrane protein compare
CA264_16570 +0.4 2.4 hypothetical protein compare
CA264_10585 +0.4 1.3 hypothetical protein compare
CA264_21530 +0.4 1.4 four-helix bundle copper-binding protein compare
CA264_01790 +0.4 1.2 hypothetical protein compare
CA264_19705 +0.4 1.6 GNAT family N-acetyltransferase compare
CA264_04500 +0.4 1.4 bacitracin ABC transporter ATP-binding protein compare
CA264_07365 +0.4 1.3 hypothetical protein compare
CA264_20485 +0.4 2.2 hypothetical protein compare
CA264_13825 +0.4 0.9 hypothetical protein compare
CA264_05400 +0.4 2.0 MarR family transcriptional regulator compare
CA264_17200 +0.4 1.8 peptide-methionine (S)-S-oxide reductase compare
CA264_03885 +0.4 2.5 hypothetical protein compare
CA264_11215 +0.4 1.4 N-acetyltransferase compare
CA264_14350 +0.4 2.6 hemolysin compare
CA264_18020 +0.4 1.2 ABC transporter permease compare
CA264_05470 +0.4 2.2 hypothetical protein compare
CA264_01585 +0.4 1.5 hypothetical protein compare
CA264_04120 +0.4 1.7 hypothetical protein compare
CA264_10050 +0.4 1.6 hypothetical protein compare
CA264_17310 +0.4 2.0 hypothetical protein compare
CA264_15425 +0.4 1.3 DUF4834 domain-containing protein compare
CA264_00710 +0.4 1.7 hypothetical protein compare
CA264_14915 +0.4 2.4 MFS transporter compare
CA264_17950 +0.4 1.8 hypothetical protein compare
CA264_09550 +0.4 1.3 hypothetical protein compare
CA264_04460 +0.4 1.4 ABC transporter compare
CA264_07605 +0.4 1.6 response regulator compare
CA264_02565 +0.4 1.4 hypothetical protein compare
CA264_12110 +0.4 2.3 glycosyltransferase compare
CA264_08785 +0.4 2.5 hypothetical protein compare
CA264_16865 +0.4 1.5 hypothetical protein compare
CA264_19030 +0.4 1.5 ribosomal subunit interface protein compare
CA264_17100 +0.4 0.7 hypothetical protein compare
CA264_18660 +0.4 2.0 T9SS C-terminal target domain-containing protein compare
CA264_19840 +0.4 1.6 hypothetical protein compare
CA264_11725 +0.4 0.8 hypothetical protein compare
CA264_13560 +0.4 0.8 membrane protein insertion efficiency factor YidD compare
CA264_13720 +0.4 1.9 hypothetical protein compare
CA264_02880 +0.4 1.4 hypothetical protein compare
CA264_05500 +0.4 1.1 hypothetical protein compare
CA264_03190 +0.4 0.9 hypothetical protein compare
CA264_07075 +0.4 1.8 hypothetical protein compare
CA264_13830 +0.4 1.5 hypothetical protein compare
CA264_12515 +0.4 1.6 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_07920 +0.4 2.1 response regulator compare
CA264_13150 +0.3 1.2 hypothetical protein compare
CA264_11345 +0.3 1.7 aquaporin compare
CA264_15485 +0.3 1.6 hypothetical protein compare
CA264_08620 +0.3 1.5 hypothetical protein compare
CA264_19010 +0.3 3.1 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_09330 +0.3 1.8 cold-shock protein compare
CA264_21465 +0.3 1.3 hypothetical protein compare
CA264_17180 +0.3 1.2 hypothetical protein compare
CA264_01855 +0.3 1.5 carbonic anhydrase compare
CA264_09735 +0.3 0.8 5-hydroxyisourate hydrolase compare
CA264_05640 +0.3 2.5 transporter compare
CA264_10955 +0.3 0.9 phenylacetate-CoA oxygenase subunit PaaJ compare
CA264_17240 +0.3 1.6 hypothetical protein compare
CA264_18045 +0.3 1.4 hypothetical protein compare
CA264_17640 +0.3 1.9 acyl-CoA dehydrogenase compare
CA264_01480 +0.3 1.3 dihydroorotase compare
CA264_03255 +0.3 1.9 hypothetical protein compare
CA264_14940 +0.3 0.9 hypothetical protein compare
CA264_18460 +0.3 1.6 hypothetical protein compare
CA264_01140 +0.3 1.5 antibiotic resistance protein MarC compare
CA264_06845 +0.3 1.0 hypothetical protein compare
CA264_20525 +0.3 2.1 prenyltransferase compare
CA264_08610 +0.3 2.2 NCS2 family permease compare
CA264_19690 +0.3 2.4 ATP-dependent exodnase (exonuclease V) alpha subunit - helicase superfamily I member compare
CA264_02450 +0.3 2.1 hypothetical protein compare
CA264_04225 +0.3 1.7 NADH-quinone oxidoreductase subunit K compare
CA264_13650 +0.3 0.8 hypothetical protein compare
CA264_14190 +0.3 1.2 hypothetical protein compare
CA264_08275 +0.3 1.2 ABC transporter ATP-binding protein compare
CA264_11305 +0.3 2.3 transcriptional regulator compare
CA264_20270 +0.3 2.0 hypothetical protein compare
CA264_11810 +0.3 1.0 HAD family hydrolase compare
CA264_00815 +0.3 1.7 cytidine deaminase compare
CA264_07340 +0.3 1.6 hypothetical protein compare
CA264_13870 +0.3 1.0 hypothetical protein compare
CA264_02815 +0.3 2.1 ketoacyl reductase compare
CA264_19885 +0.3 1.8 uridine kinase compare
CA264_03610 +0.3 1.4 hypothetical protein compare
CA264_07200 +0.3 1.7 glutamate dehydrogenase compare
CA264_20660 +0.3 1.5 methylmalonyl Co-A mutase-associated GTPase MeaB compare
CA264_03385 +0.3 1.1 hypothetical protein compare
CA264_04265 +0.3 1.9 NADH-quinone oxidoreductase subunit B compare
CA264_17745 +0.3 1.2 TetR family transcriptional regulator compare
CA264_17185 +0.3 1.3 peptide-methionine (R)-S-oxide reductase compare
CA264_02085 +0.3 2.1 hypothetical protein compare
CA264_04700 +0.3 2.7 cyanophycin synthetase compare
CA264_07765 +0.3 1.7 hypothetical protein compare
CA264_08410 +0.3 1.2 CRISPR-associated endonuclease Cas2 compare
CA264_06950 +0.3 1.5 glutathione peroxidase compare
CA264_08500 +0.3 1.1 hypothetical protein compare
CA264_19215 +0.3 2.0 RNA polymerase subunit sigma compare
CA264_10255 +0.3 0.8 hypothetical protein compare
CA264_20285 +0.3 0.8 hypothetical protein compare
CA264_15600 +0.3 1.4 tRNA glutamyl-Q synthetase compare
CA264_17570 +0.3 1.7 TIGR00266 family protein compare
CA264_18090 +0.3 1.6 DUF305 domain-containing protein compare
CA264_01040 +0.3 2.0 hypothetical protein compare
CA264_15295 +0.3 1.7 SAM-dependent methyltransferase compare
CA264_10045 +0.3 1.1 hypothetical protein compare
CA264_15190 +0.3 0.9 hypothetical protein compare
CA264_09355 +0.3 1.2 nitroreductase compare
CA264_06520 +0.3 1.6 DUF4440 domain-containing protein compare
CA264_01065 +0.3 0.7 MarR family transcriptional regulator compare
CA264_16465 +0.3 1.3 hypothetical protein compare
CA264_01850 +0.3 1.2 hypothetical protein compare
CA264_17420 +0.3 1.8 hypothetical protein compare
CA264_20685 +0.3 1.5 transposase compare
CA264_15970 +0.3 1.3 hypothetical protein compare
CA264_07485 +0.3 1.3 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_05110 +0.3 1.8 imidazole glycerol phosphate synthase cyclase subunit compare
CA264_08665 +0.3 1.3 N-acetylmuramoyl-L-alanine amidase compare
CA264_09005 +0.3 1.0 hypothetical protein compare
CA264_14925 +0.3 0.7 hypothetical protein compare
CA264_17395 +0.3 1.2 glutathione synthetase compare
CA264_17390 +0.3 0.9 hypothetical protein compare
CA264_09940 +0.3 1.7 conjugative transposon protein TraM compare
CA264_19080 +0.3 1.8 hypothetical protein compare
CA264_17740 +0.3 1.9 AraC family transcriptional regulator compare
CA264_13110 +0.3 1.8 3-deoxy-7-phosphoheptulonate synthase compare
CA264_18110 +0.3 1.5 hypothetical protein compare
CA264_02600 +0.3 1.6 DsbA family protein compare
CA264_01025 +0.3 0.4 hypothetical protein compare
CA264_21450 +0.3 1.4 hypothetical protein compare
CA264_17485 +0.3 0.4 cytochrome C biosynthesis protein compare
CA264_18360 +0.3 1.2 osmotically inducible protein OsmC compare
CA264_07195 +0.3 0.8 hypothetical protein compare
CA264_09645 +0.3 1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Sodium Chloride across organisms