Experiment set1IT069 for Rhizobium sp. OAE497

Compare to:

L-Methionine carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS05265 -7.1 -4.9 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
ABIE40_RS19355 -6.8 -4.7 thioredoxin compare
ABIE40_RS19050 -6.7 -6.6 3-isopropylmalate dehydrogenase compare
ABIE40_RS18380 -6.7 -6.5 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS00245 -6.4 -8.8 prephenate dehydratase compare
ABIE40_RS18590 -6.4 -9.8 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.2 -10.4 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS11950 -6.2 -6.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS13330 -6.1 -5.9 2-isopropylmalate synthase compare
ABIE40_RS17525 -6.1 -3.4 lipoprotein compare
ABIE40_RS09095 -5.7 -4.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS18775 -5.7 -12.2 pyruvate carboxylase compare
ABIE40_RS06555 -5.6 -3.2 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS19395 -5.6 -3.9 PTS sugar transporter subunit IIA compare
ABIE40_RS06730 -5.5 -3.8 riboflavin synthase compare
ABIE40_RS09545 -5.5 -3.6 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.3 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.3 -3.7 histidinol-phosphatase compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS10725 -5.2 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS02725 -5.2 -3.6 histidinol dehydrogenase compare
ABIE40_RS01970 -5.2 -3.6 acetylglutamate kinase compare
ABIE40_RS09660 -5.1 -13.6 AI-2E family transporter compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS03660 -5.1 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19040 -5.1 -7.7 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS08635 -5.1 -9.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS19435 -5.1 -2.9 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10720 -4.9 -3.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS09725 -4.8 -3.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS11105 -4.7 -4.6 cobyrinate a,c-diamide synthase compare
ABIE40_RS10180 -4.7 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS16655 -4.7 -6.4 creatininase family protein compare
ABIE40_RS06560 -4.7 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19330 -4.7 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS13410 -4.6 -3.2 anthranilate synthase compare
ABIE40_RS06930 -4.6 -4.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS09360 -4.5 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS17650 -4.5 -3.1 cobaltochelatase subunit CobS compare
ABIE40_RS09150 -4.5 -18.8 nitrite/sulfite reductase compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS16070 -4.5 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS18925 -4.5 -5.3 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS20440 -4.4 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS18920 -4.4 -6.5 glutamate 5-kinase compare
ABIE40_RS02320 -4.4 -3.1 aspartate aminotransferase family protein compare
ABIE40_RS06270 -4.4 -6.7 amidophosphoribosyltransferase compare
ABIE40_RS11095 -4.4 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS19440 -4.3 -5.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS11175 -4.2 -6.4 cobyric acid synthase compare
ABIE40_RS11155 -4.2 -4.1 cobaltochelatase subunit CobN compare
ABIE40_RS11150 -4.2 -9.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS19130 -4.1 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS20455 -4.1 -2.3 precorrin-8X methylmutase compare
ABIE40_RS05270 -4.0 -11.4 2-dehydro-3-deoxygalactonokinase compare
ABIE40_RS20430 -4.0 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS12925 -3.9 -12.3 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS03405 -3.9 -2.7 anti-sigma factor compare
ABIE40_RS12135 -3.9 -2.7 methionine synthase compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS10390 -3.8 -2.6 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS08645 -3.8 -6.8 LL-diaminopimelate aminotransferase compare
ABIE40_RS09090 -3.8 -8.1 nitrogen regulation protein NR(I) compare
ABIE40_RS17645 -3.8 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS14990 -3.8 -12.7 glycosyltransferase family 2 protein compare
ABIE40_RS14980 -3.8 -4.5 glycoside hydrolase family 16 protein compare
ABIE40_RS06050 -3.8 -6.7 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS08970 -3.7 -9.5 citrate synthase compare
ABIE40_RS00725 -3.7 -4.4 DNA cytosine methyltransferase compare
ABIE40_RS20450 -3.7 -4.0 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS19245 -3.6 -4.6 Maf-like protein compare
ABIE40_RS01135 -3.6 -1.2 50S ribosomal protein L20 compare
ABIE40_RS05430 -3.6 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS11165 -3.5 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS20460 -3.5 -3.2 precorrin-3B synthase compare
ABIE40_RS09540 -3.4 -7.5 peptidylprolyl isomerase compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS00930 -3.4 -7.5 ABC transporter permease compare
ABIE40_RS10155 -3.4 -2.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS15345 -3.3 -10.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS19480 -3.2 -3.1 DUF1402 family protein compare
ABIE40_RS16570 -3.2 -4.1 tetratricopeptide repeat protein compare
ABIE40_RS06725 -3.2 -5.8 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS09155 -3.1 -4.3 DUF934 domain-containing protein compare
ABIE40_RS20445 -3.1 -1.4 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS09720 -3.0 -3.6 GTP cyclohydrolase I FolE compare
ABIE40_RS16645 -3.0 -15.7 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS00580 -2.9 -3.0 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS01765 -2.8 -6.0 [protein-PII] uridylyltransferase compare
ABIE40_RS01930 -2.8 -1.9 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS14985 -2.8 -2.3 glycosyltransferase compare
ABIE40_RS06440 -2.8 -5.0 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS04475 -2.7 -10.8 phosphoadenylyl-sulfate reductase compare
ABIE40_RS04465 -2.7 -14.0 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS11910 -2.7 -7.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS10345 -2.7 -6.4 RNA polymerase-binding protein DksA compare
ABIE40_RS30315 -2.7 -1.5 hypothetical protein compare
ABIE40_RS18880 -2.7 -11.9 UDP-glucose 4-epimerase GalE compare
ABIE40_RS07740 -2.6 -2.5 elongation factor Tu compare
ABIE40_RS00935 -2.6 -6.8 ABC transporter substrate-binding protein compare
ABIE40_RS18685 -2.5 -5.6 beta-ketoacyl-ACP reductase compare
ABIE40_RS11060 -2.5 -4.2 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS08935 -2.5 -3.0 RIP metalloprotease RseP compare
ABIE40_RS14955 -2.5 -7.8 sugar transferase compare
ABIE40_RS05660 -2.4 -2.7 response regulator transcription factor compare
ABIE40_RS05695 -2.4 -4.5 Do family serine endopeptidase compare
ABIE40_RS05155 -2.4 -5.0 DUF5330 domain-containing protein compare
ABIE40_RS19260 -2.4 -3.2 DNA polymerase III subunit epsilon compare
ABIE40_RS15730 -2.3 -3.4 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS09140 -2.3 -6.0 siroheme synthase CysG compare
ABIE40_RS24490 -2.3 -1.5 flavin reductase compare
ABIE40_RS04470 -2.2 -12.0 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS17565 -2.2 -2.7 ABC transporter permease compare
ABIE40_RS12845 -2.1 -2.7 glycosyltransferase family 4 protein compare
ABIE40_RS08140 -2.1 -11.1 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS03815 -2.1 -2.0 DUF6101 family protein compare
ABIE40_RS11065 -2.0 -3.6 zinc-binding dehydrogenase compare
ABIE40_RS10200 -2.0 -2.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS19365 -2.0 -3.0 double-strand break repair protein AddB compare
ABIE40_RS30230 -2.0 -1.7 CsbD family protein compare
ABIE40_RS08425 -2.0 -2.9 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS00925 -2.0 -3.4 ABC transporter permease compare
ABIE40_RS17585 -1.9 -4.0 DUF2125 domain-containing protein compare
ABIE40_RS15920 -1.9 -0.9 50S ribosomal protein L31 compare
ABIE40_RS00490 -1.8 -8.3 DNA polymerase I compare
ABIE40_RS30865 -1.8 -2.5 CheR family methyltransferase compare
ABIE40_RS16170 -1.8 -2.3 DUF882 domain-containing protein compare
ABIE40_RS19360 -1.8 -3.9 double-strand break repair helicase AddA compare
ABIE40_RS16210 -1.8 -7.1 homospermidine synthase compare
ABIE40_RS27215 -1.7 -1.1 3'-5' exonuclease compare
ABIE40_RS22665 -1.7 -2.6 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS04215 -1.7 -2.3 sensor domain-containing phosphodiesterase compare
ABIE40_RS18255 -1.7 -1.7 hypothetical protein compare
ABIE40_RS13370 -1.7 -8.1 CDF family cation efflux transporter EmfA compare
ABIE40_RS19645 -1.7 -9.8 acyltransferase compare
ABIE40_RS09170 -1.7 -4.4 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS12360 -1.7 -8.2 DUF5131 family protein compare
ABIE40_RS01055 -1.7 -5.3 translation elongation factor 4 compare
ABIE40_RS18640 -1.7 -7.8 M48 family metalloprotease compare
ABIE40_RS09425 -1.7 -4.7 peptidylprolyl isomerase compare
ABIE40_RS13960 -1.7 -7.7 multiple monosaccharide ABC transporter permease compare
ABIE40_RS07105 -1.7 -2.8 DNA-binding protein HupB compare
ABIE40_RS19385 -1.6 -5.1 adenosylhomocysteinase compare
ABIE40_RS18300 -1.6 -6.8 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS05260 -1.5 -8.9 SMP-30/gluconolactonase/LRE family protein compare
ABIE40_RS28815 -1.5 -4.9 GNAT family N-acetyltransferase compare
ABIE40_RS17000 -1.5 -3.4 ABC transporter ATP-binding protein compare
ABIE40_RS13955 -1.5 -9.0 multiple monosaccharide ABC transporter ATP-binding protein compare
ABIE40_RS18720 -1.5 -1.5 polyprenyl synthetase family protein compare
ABIE40_RS15855 -1.5 -1.7 cell division protein ZapA compare
ABIE40_RS19455 -1.5 -1.0 DUF2628 domain-containing protein compare
ABIE40_RS09145 -1.5 -3.5 DUF2849 domain-containing protein compare
ABIE40_RS06220 -1.5 -9.5 citramalate synthase compare
ABIE40_RS30895 -1.5 -1.6 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS09940 -1.5 -7.4 glycine cleavage system aminomethyltransferase GcvT compare
ABIE40_RS03515 -1.5 -2.8 glutamate--cysteine ligase compare
ABIE40_RS10140 -1.5 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS14855 -1.5 -5.2 NAD-dependent epimerase compare
ABIE40_RS13950 -1.5 -8.9 multiple monosaccharide ABC transporter substrate-binding protein compare
ABIE40_RS18970 -1.5 -2.7 murein hydrolase activator EnvC compare
ABIE40_RS05670 -1.4 -4.8 membrane protein compare
ABIE40_RS06135 -1.4 -3.0 tyrosine phosphatase family protein compare
ABIE40_RS05685 -1.4 -8.4 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS09945 -1.4 -5.6 glycine cleavage system protein GcvH compare
ABIE40_RS18585 -1.4 -7.4 aldose epimerase family protein compare
ABIE40_RS19700 -1.4 -2.9 MBL fold metallo-hydrolase compare
ABIE40_RS15890 -1.4 -7.0 fructose bisphosphate aldolase compare
ABIE40_RS13005 -1.3 -6.5 pyrroline-5-carboxylate reductase compare
ABIE40_RS28370 -1.3 -1.0 oxidoreductase compare
ABIE40_RS19375 -1.3 -3.8 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS23485 -1.3 -1.0 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS14940 -1.3 -8.0 acyltransferase compare
ABIE40_RS03095 -1.3 -1.8 flagellar biosynthesis repressor FlbT compare
ABIE40_RS21985 -1.3 -3.0 MarR family transcriptional regulator compare
ABIE40_RS18735 -1.3 -5.1 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11960 -1.3 -1.9 energy-dependent translational throttle protein EttA compare
ABIE40_RS28600 -1.3 -0.9 FAD-dependent oxidoreductase compare
ABIE40_RS02305 -1.3 -3.8 phosphate signaling complex protein PhoU compare
ABIE40_RS20635 -1.3 -1.9 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS06700 -1.2 -2.3 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS30835 -1.2 -2.3 cytochrome c oxidase subunit 3 compare
ABIE40_RS05690 -1.2 -2.9 cytochrome c-type biogenesis protein compare
ABIE40_RS05165 -1.2 -4.1 peptidoglycan-binding protein compare
ABIE40_RS15010 -1.2 -6.5 metallophosphoesterase compare
ABIE40_RS10705 -1.2 -8.9 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS24310 -1.2 -4.0 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS00585 -1.2 -5.2 4-hydroxy-tetrahydrodipicolinate reductase compare
ABIE40_RS03485 -1.2 -7.4 MAPEG family protein compare
ABIE40_RS06275 -1.2 -3.9 CvpA family protein compare
ABIE40_RS01705 -1.2 -5.8 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS17010 -1.1 -4.8 sugar ABC transporter permease compare
ABIE40_RS26805 -1.1 -1.3 chaperone modulator CbpM compare
ABIE40_RS22405 -1.1 -3.0 GntR family transcriptional regulator compare
ABIE40_RS14455 -1.1 -1.5 NepR family anti-sigma factor compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source L-Methionine in Rhizobium sp. OAE497

For carbon source L-Methionine across organisms