Experiment set1IT068 for Magnetospirillum magneticum AMB-1

Compare to:

30_initial_3

200 most important genes:

  gene name fitness t score description  
AMB_RS17335 -2.1 -1.8 N-acyl-L-homoserine lactone synthetase compare
AMB_RS11740 -2.1 -13.6 ubiquinone-binding protein compare
AMB_RS00355 -1.9 -9.5 radical SAM protein compare
AMB_RS21290 -1.9 -2.1 DUF4139 domain-containing protein compare
AMB_RS01190 -1.8 -5.9 UbiD family decarboxylase compare
AMB_RS00010 -1.8 -2.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS19880 -1.8 -4.7 site-specific tyrosine recombinase XerD compare
AMB_RS19545 -1.7 -3.5 elongation factor 4 compare
AMB_RS11640 -1.5 -3.2 UbiX family flavin prenyltransferase compare
AMB_RS16130 -1.5 -2.4 phosphoglycerate dehydrogenase compare
AMB_RS17350 -1.5 -1.9 rubrerythrin compare
AMB_RS20350 -1.4 -4.7 aspartate 1-decarboxylase compare
AMB_RS14175 -1.4 -1.8 COQ9 family protein compare
AMB_RS01605 -1.4 -2.3 aspartate aminotransferase family protein compare
AMB_RS21385 -1.3 -6.4 helix-turn-helix transcriptional regulator compare
AMB_RS15295 -1.3 -1.8 iron donor protein CyaY compare
AMB_RS20750 -1.2 -6.1 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS24000 -1.2 -1.6 glycosyltransferase family 1 protein compare
AMB_RS20120 -1.2 -3.6 VOC family protein compare
AMB_RS07745 -1.2 -3.3 disulfide bond formation protein B compare
AMB_RS14035 -1.2 -4.6 endopeptidase La compare
AMB_RS10475 -1.2 -1.7 transcriptional regulator NrdR compare
AMB_RS05530 -1.2 -5.4 glycosyltransferase compare
AMB_RS23090 -1.1 -3.8 NAD(P)-dependent oxidoreductase compare
AMB_RS14855 -1.1 -2.1 molybdate ABC transporter substrate-binding protein compare
AMB_RS14525 -1.1 -0.9 xylanase/chitin deacetylase compare
AMB_RS07010 -1.1 -5.0 ATP-dependent helicase compare
AMB_RS04050 -1.0 -7.7 thiamine pyrophosphate-binding protein compare
AMB_RS12395 -1.0 -2.1 succinate dehydrogenase assembly factor 2 compare
AMB_RS07115 -1.0 -2.9 Lrp/AsnC family transcriptional regulator compare
AMB_RS04045 -1.0 -7.3 B12-binding domain-containing radical SAM protein compare
AMB_RS16100 -1.0 -4.3 RNA polymerase sigma factor RpoH compare
AMB_RS07865 -1.0 -5.0 ATP-dependent chaperone ClpB compare
AMB_RS07700 -1.0 -1.5 hypothetical protein compare
AMB_RS19790 -1.0 -2.8 NAD(P)-dependent oxidoreductase compare
AMB_RS07110 -1.0 -1.7 Lrp/AsnC family transcriptional regulator compare
AMB_RS03205 -1.0 -2.0 DNA recombination/repair protein RecA compare
AMB_RS03725 -1.0 -3.6 DNA helicase II compare
AMB_RS20020 -0.9 -1.6 cell division protein ZapE compare
AMB_RS02025 -0.9 -1.3 hypothetical protein compare
AMB_RS04060 -0.9 -6.2 pyridoxal phosphate-dependent aminotransferase compare
AMB_RS00815 -0.9 -5.7 hypothetical protein compare
AMB_RS23195 -0.9 -3.2 ABC transporter ATP-binding protein compare
AMB_RS22800 -0.9 -2.1 glutathione synthase compare
AMB_RS03135 -0.9 -1.8 NADP-dependent isocitrate dehydrogenase compare
AMB_RS14595 -0.8 -2.8 acetoin utilization protein compare
AMB_RS15610 -0.8 -3.8 hypothetical protein compare
AMB_RS22450 -0.8 -4.4 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS13510 -0.8 -2.9 cytochrome C protein NapC compare
AMB_RS02660 -0.8 -4.1 SCO family protein compare
AMB_RS18850 -0.8 -1.6 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS13920 -0.8 -1.2 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS10730 -0.8 -1.7 hypothetical protein compare
AMB_RS13815 -0.8 -1.7 hypothetical protein compare
AMB_RS12320 -0.8 -0.8 septal ring lytic transglycosylase RlpA family protein compare
AMB_RS23915 -0.7 -1.3 XRE family transcriptional regulator compare
AMB_RS00795 -0.7 -5.5 LPS biosynthesis protein compare
AMB_RS23070 -0.7 -2.0 ferredoxin compare
AMB_RS21265 -0.7 -2.6 c-type cytochrome biogenesis protein CcmI compare
AMB_RS22810 -0.7 -0.9 hypothetical protein compare
AMB_RS18590 -0.7 -1.3 glycosyltransferase family 2 protein compare
AMB_RS09970 -0.7 -0.5 NAD synthetase compare
AMB_RS16080 -0.7 -1.7 tRNA-Glu compare
AMB_RS05825 -0.7 -2.6 hypothetical protein compare
AMB_RS20870 -0.7 -0.9 gamma-glutamyl-gamma-aminobutyrate hydrolase compare
AMB_RS07625 -0.7 -1.5 hypothetical protein compare
AMB_RS15550 -0.7 -3.3 copper chaperone PCu(A)C compare
AMB_RS04510 -0.7 -2.3 ferrous iron transporter compare
AMB_RS08115 -0.7 -3.8 carbon-nitrogen hydrolase family protein compare
AMB_RS24680 -0.7 -2.4 hypothetical protein compare
AMB_RS24285 -0.7 -2.6 hypothetical protein compare
AMB_RS13415 -0.7 -3.9 sulfurtransferase FdhD compare
AMB_RS19160 -0.7 -2.2 methyltransferase domain-containing protein compare
AMB_RS23845 -0.6 -1.9 hypothetical protein compare
AMB_RS16705 -0.6 -1.0 LysR family transcriptional regulator compare
AMB_RS17980 -0.6 -2.5 biopolymer transporter ExbD compare
AMB_RS21310 -0.6 -0.8 zinc-finger domain-containing protein compare
AMB_RS09095 -0.6 -2.2 hypothetical protein compare
AMB_RS23950 -0.6 -3.3 hemerythrin compare
AMB_RS21915 -0.6 -1.7 EamA/RhaT family transporter compare
AMB_RS12855 -0.6 -1.3 hypothetical protein compare
AMB_RS05485 -0.6 -3.0 kinase compare
AMB_RS03015 -0.6 -2.4 hypothetical protein compare
AMB_RS22085 -0.6 -5.8 cytochrome c oxidase accessory protein CcoG compare
AMB_RS08465 -0.6 -3.6 ABC transporter ATP-binding protein compare
AMB_RS14245 -0.6 -0.5 DUF1849 domain-containing protein compare
AMB_RS03095 -0.6 -2.2 tetratricopeptide repeat protein compare
AMB_RS02835 -0.6 -1.1 two-component sensor histidine kinase compare
AMB_RS10580 -0.6 -1.5 hypothetical protein compare
AMB_RS18330 -0.6 -3.2 glycosyl transferase family protein compare
AMB_RS08265 -0.6 -1.6 hypothetical protein compare
AMB_RS18595 -0.6 -1.9 leucyl aminopeptidase compare
AMB_RS24445 -0.6 -2.1 hypothetical protein compare
AMB_RS16700 -0.6 -0.8 nuclease PIN compare
AMB_RS17625 -0.6 -3.8 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS18380 -0.6 -1.2 methyl-accepting chemotaxis protein compare
AMB_RS05940 -0.6 -0.9 hypothetical protein compare
AMB_RS24515 -0.6 -3.5 hypothetical protein compare
AMB_RS01745 -0.6 -1.1 hypothetical protein compare
AMB_RS02725 -0.6 -1.2 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS03835 -0.6 -0.6 YicC family protein compare
AMB_RS03510 -0.6 -3.3 flagellin-like protein compare
AMB_RS15035 -0.6 -2.4 DUF2189 domain-containing protein compare
AMB_RS10600 -0.5 -1.6 hypothetical protein compare
AMB_RS14240 -0.5 -1.3 hypothetical protein compare
AMB_RS00745 -0.5 -1.3 MFS transporter compare
AMB_RS20055 -0.5 -2.1 MerR family transcriptional regulator compare
AMB_RS20145 -0.5 -1.6 chromosome segregation ATPase compare
AMB_RS05670 -0.5 -0.4 response regulator compare
AMB_RS03655 -0.5 -2.3 hypothetical protein compare
AMB_RS01305 -0.5 -3.2 protocatechuate 4,5-dioxygenase subunit alpha compare
AMB_RS22235 -0.5 -1.1 RNase adaptor protein RapZ compare
AMB_RS22150 -0.5 -0.9 MarR family transcriptional regulator compare
AMB_RS05435 -0.5 -1.6 ABC transporter permease compare
AMB_RS00180 -0.5 -2.7 hypothetical protein compare
AMB_RS07120 -0.5 -1.8 heme d1 biosynthesis radical SAM protein NirJ compare
AMB_RS02650 -0.5 -3.1 uroporphyrinogen-III C-methyltransferase compare
AMB_RS23865 -0.5 -1.4 DUF2786 domain-containing protein compare
AMB_RS05495 -0.5 -4.0 hypothetical protein compare
AMB_RS09990 -0.5 -2.3 hypothetical protein compare
AMB_RS14150 -0.5 -1.6 hypothetical protein compare
AMB_RS12390 -0.5 -3.3 transcription-repair coupling factor compare
AMB_RS13315 -0.5 -1.8 hypothetical protein compare
AMB_RS15540 -0.5 -3.1 SCO family protein compare
AMB_RS19115 -0.5 -0.8 hypothetical protein compare
AMB_RS14805 -0.5 -1.6 hypothetical protein compare
AMB_RS06295 -0.5 -1.8 LysR family transcriptional regulator compare
AMB_RS19645 -0.5 -2.2 cAMP-binding protein compare
AMB_RS00810 -0.5 -2.2 hypothetical protein compare
AMB_RS05085 -0.5 -1.3 hemerythrin compare
AMB_RS02815 -0.5 -2.4 hypothetical protein compare
AMB_RS10700 -0.5 -1.9 hypothetical protein compare
AMB_RS04185 -0.5 -3.1 IMP dehydrogenase compare
AMB_RS01480 -0.5 -1.3 M48 family peptidase compare
AMB_RS21445 -0.5 -2.9 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
AMB_RS21725 -0.5 -2.0 hemerythrin compare
AMB_RS19340 -0.5 -0.9 EamA family transporter compare
AMB_RS24510 -0.5 -2.1 hypothetical protein compare
AMB_RS12615 -0.5 -1.4 phytoene/squalene synthetase compare
AMB_RS06755 -0.5 -1.2 hypothetical protein compare
AMB_RS07240 -0.5 -3.4 PAS domain-containing sensor histidine kinase compare
AMB_RS11555 -0.5 -1.1 MBL fold metallo-hydrolase compare
AMB_RS21455 -0.5 -2.3 XRE family transcriptional regulator compare
AMB_RS21050 -0.5 -0.9 CoA pyrophosphatase compare
AMB_RS04485 -0.5 -1.2 NAD(P)-dependent oxidoreductase compare
AMB_RS00805 -0.5 -3.8 haloacid dehalogenase compare
AMB_RS19230 -0.5 -1.6 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS19670 -0.5 -2.3 metal-transporting ATPase compare
AMB_RS15930 -0.5 -1.6 hypothetical protein compare
AMB_RS12050 -0.5 -1.1 HTH domain-containing protein compare
AMB_RS17450 -0.5 -1.0 DUF1987 domain-containing protein compare
AMB_RS15515 -0.5 -3.1 nitrous oxide reductase family maturation protein NosD compare
AMB_RS17645 -0.5 -3.5 iron-sulfur cluster carrier protein ApbC compare
AMB_RS11780 -0.5 -1.9 glutamate synthase subunit beta compare
AMB_RS05680 -0.5 -1.7 anti-sigma factor antagonist compare
AMB_RS12825 -0.5 -1.0 phosphatidylglycerophosphatase A compare
AMB_RS02705 -0.5 -1.4 ribbon-helix-helix protein, CopG family compare
AMB_RS01760 -0.5 -1.0 hypothetical protein compare
AMB_RS06370 -0.5 -1.2 DNA-binding response regulator compare
AMB_RS06005 -0.5 -1.4 hypothetical protein compare
AMB_RS16375 -0.5 -1.7 MFS transporter compare
AMB_RS13520 -0.5 -2.4 quinol dehydrogenase ferredoxin subunit NapH compare
AMB_RS13525 -0.5 -0.8 ferredoxin-type protein NapG compare
AMB_RS14290 -0.5 -2.4 exopolyphosphatase compare
AMB_RS07765 -0.5 -1.2 hypothetical protein compare
AMB_RS18640 -0.5 -2.5 6-carboxytetrahydropterin synthase compare
AMB_RS08155 -0.4 -1.2 DUF4115 domain-containing protein compare
AMB_RS18915 -0.4 -1.1 Flp family type IVb pilin compare
AMB_RS19255 -0.4 -3.1 excinuclease ABC subunit UvrB compare
AMB_RS03400 -0.4 -1.7 plasmid maintenance system killer protein compare
AMB_RS21170 -0.4 -2.7 adenosine kinase compare
AMB_RS12665 -0.4 -1.5 M23 family peptidase compare
AMB_RS06085 -0.4 -2.1 hypothetical protein compare
AMB_RS19240 -0.4 -2.6 UvrABC system protein C compare
AMB_RS20770 -0.4 -1.1 TrkH family potassium uptake protein compare
AMB_RS23170 -0.4 -1.8 hypothetical protein compare
AMB_RS20015 -0.4 -3.1 exopolyphosphatase compare
AMB_RS22490 -0.4 -1.0 YdcF family protein compare
AMB_RS18655 -0.4 -1.6 site-specific integrase compare
AMB_RS11820 -0.4 -1.0 transcriptional regulator NrdR compare
AMB_RS18015 -0.4 -1.6 ABC transporter ATP-binding protein compare
AMB_RS08460 -0.4 -3.0 branched-chain amino acid ABC transporter permease compare
AMB_RS02675 -0.4 -1.8 YcgN family cysteine cluster protein compare
AMB_RS03920 -0.4 -1.6 hypothetical protein compare
AMB_RS15560 -0.4 -0.7 hemerythrin compare
AMB_RS05105 -0.4 -1.7 PAS domain S-box protein compare
AMB_RS12590 -0.4 -2.4 tetratricopeptide repeat protein compare
AMB_RS16835 -0.4 -1.5 hypothetical protein compare
AMB_RS12815 -0.4 -1.4 sulfite oxidase-like oxidoreductase compare
AMB_RS20585 -0.4 -0.9 DNA-binding protein compare
AMB_RS22840 -0.4 -2.5 resolvase compare
AMB_RS10855 -0.4 -0.5 RidA family protein compare
AMB_RS21755 -0.4 -1.4 hypothetical protein compare
AMB_RS02900 -0.4 -1.0 hypothetical protein compare
AMB_RS16630 -0.4 -1.5 hypothetical protein compare
AMB_RS22375 -0.4 -2.3 hypothetical protein compare
AMB_RS04325 -0.4 -2.0 TetR/AcrR family transcriptional regulator compare
AMB_RS00855 -0.4 -2.9 helix-turn-helix domain-containing protein compare
AMB_RS23065 -0.4 -1.4 hypothetical protein compare
AMB_RS17800 -0.4 -1.5 anti-sigma factor antagonist compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms