Experiment set1IT068 for Agrobacterium fabrum C58

Compare to:

Sodium Fumarate dibasic carbon source

200 most important genes:

  gene name fitness t score description  
Atu2040 -6.8 -6.6 phosphoserine phosphatase compare
Atu1850 -6.8 -6.3 phosphoribosylformylglycinamidine synthetase II compare
Atu0486 -6.7 -6.5 dihydroorotate dehydrogenase compare
Atu1687 -6.5 -12.4 anthranilate phosphoribosyltransferase compare
Atu2289 -6.4 -20.9 anthranilate synthase component I and II compare
Atu1688 -6.4 -7.6 indole-3-glycerol-phosphate synthase compare
Atu0422 -6.1 -4.2 ABC transporter, membrane spanning protein compare
Atu2791 -6.0 -9.6 3-isopropylmalate dehydrogenase compare
Atu3755 -5.9 -5.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2036 -5.8 -19.1 acetolactate synthase III, large subunit compare
Atu3739 -5.8 -3.1 phosphoglycerate kinase compare
Atu0400 -5.8 -5.7 orotate phosphoribosyltransferase compare
Atu2264 -5.7 -16.9 2-isopropylmalate synthase compare
Atu1075 -5.7 -10.2 amidophosphoribosyltransferase compare
Atu1844 -5.7 -5.1 Phosphoribosylformylglycinamidine synthetase compare
Atu0099 -5.6 -14.9 prephenate dehydratase compare
Atu3754 -5.6 -8.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0039 -5.5 -3.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu1750 -5.4 -4.0 phosphoribosyl c-AMP cyclohydrolase compare
Atu0679 -5.4 -7.4 ATP phosphoribosyltransferase compare
Atu0537 -5.4 -8.2 histidinol dehydrogenase compare
Atu1030 -5.3 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0678 -5.3 -9.4 histidyl-tRNA synthetase compare
Atu3706 -5.2 -10.6 D-3-phosphoglycerate dehydrogenase compare
Atu3740 -5.2 -13.1 fructose bisphosphate aldolase compare
Atu2709 -5.1 -21.4 3-isopropylmalate dehydratase, large subunit compare
Atu1205 -5.1 -16.9 threonine dehydratase compare
Atu1308 -5.0 -6.5 aspartate carbamoyl transferase catalytic subunit compare
Atu1588 -5.0 -13.0 homoserine dehydrogenase compare
Atu2747 -5.0 -12.9 hypothetical protein compare
Atu0298 -5.0 -7.6 orotidine 5 compare
Atu4505 -5.0 -14.0 LacI family transcriptional regulator compare
Atu1620 -5.0 -14.6 triosephosphate isomerase compare
Atu0647 -5.0 -8.3 phosphoribosylamine--glycine ligase compare
Atu0038 -4.9 -5.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2718 -4.9 -10.3 homoserine O-succinyltransferase compare
Atu0399 -4.8 -7.4 dihydroorotase compare
Atu0041 -4.8 -3.3 glutamine amidotransferase compare
Atu0017 -4.8 -4.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3885 -4.7 -10.0 inositol monophosphatase compare
Atu0035 -4.7 -13.8 phosphoenolpyruvate carboxykinase compare
Atu0043 -4.7 -4.5 imidazoleglycerol-phosphate dehydratase compare
Atu1845 -4.6 -7.3 phosphoribosylformylglycinamidine synthase I compare
Atu3482 -4.6 -10.4 pantoate--beta-alanine ligase compare
Atu1307 -4.6 -4.8 dihydroorotase compare
Atu0432 -4.6 -8.1 O-succinylhomoserine sulfhydrylase compare
Atu1141 -4.6 -9.8 Phosphoribosylglycinamide synthetase compare
Atu0421 -4.5 -2.6 ABC transporter, membrane spanning protein compare
Atu2115 -4.4 -13.7 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2790 -4.4 -3.6 3-isopropylmalate dehydratase, small subunit compare
Atu0030 -4.3 -2.5 phosphocarrier protein HPr compare
Atu1140 -4.3 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1686 -4.3 -17.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0602 -4.1 -13.0 glutamine synthetase compare
Atu3784 -4.0 -25.4 glutamate synthase large subunit compare
Atu0723 -4.0 -3.9 FAD dependent oxidoreductase compare
Atu3483 -3.9 -8.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3783 -3.9 -16.4 glutamate synthase subunit beta compare
Atu3469 -3.9 -4.6 phosphoglyceromutase compare
Atu3731 -3.9 -9.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu3707 -3.8 -3.7 phosphoserine aminotransferase compare
Atu1463 -3.8 -9.1 glycine cleavage system component H compare
Atu0040 -3.8 -2.1 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1464 -3.8 -10.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu2548 -3.6 -16.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2015 -3.6 -12.7 aminotransferase compare
Atu1462 -3.4 -15.7 glycine cleavage system protein P2 compare
Atu1359 -3.4 -1.9 dnaK deletion suppressor protein compare
Atu0659 -3.3 -7.6 NTP pyrophosphohydrolase, MutT family compare
Atu2650 -3.1 -14.3 glycerol-3-phosphate dehydrogenase compare
Atu1589 -3.1 -8.7 aminotransferase, class I compare
Atu0601 -3.0 -14.4 oxidoreductase compare
Atu2020 -2.9 -8.1 transcriptional regulator, TetR family compare
Atu3763 -2.8 -2.5 hypothetical protein compare
Atu0999 -2.8 -9.0 magnesium transport protein compare
Atu0912 -2.5 -2.0 Na+/H+ antiporter compare
Atu0434 -2.4 -4.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu6098 -2.4 -0.9 transcriptional regulator, HTH family compare
Atu2155 -2.1 -16.7 methionine synthase compare
Atu0876 -2.1 -3.6 superoxide dismutase compare
Atu0332 -1.9 -9.2 RNA polymerase sigma-54 factor compare
Atu1454 -1.9 -7.1 siroheme synthase compare
Atu1456 -1.8 -11.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2569 -1.8 -11.4 thiamine biosynthesis protein compare
Atu3290 -1.7 -8.0 phosphomethylpyrimidine kinase compare
Atu1446 -1.7 -2.7 two component response regulator compare
Atu1021 -1.7 -2.9 outer membrane protein compare
Atu4096 -1.7 -7.0 nicotinate-nucleotide pyrophosphorylase compare
Atu3289 -1.7 -5.5 thiamine-phosphate pyrophosphorylase compare
Atu8115 -1.6 -4.0 Hypothetical Protein compare
Atu1685 -1.6 -1.6 hypothetical protein compare
Atu1447 -1.5 -4.4 two component sensor kinase compare
Atu4098 -1.5 -9.4 quinolinate synthetase compare
Atu3997 -1.5 -9.9 biotin synthetase compare
Atu6114 -1.5 -1.7 hypothetical protein compare
Atu4173 -1.4 -3.5 phosphoenolpyruvate-protein phosphotransferase compare
Atu3288 -1.4 -6.5 hydroxyethylthiazole kinase compare
Atu0149 -1.4 -3.6 enoyl-(acyl-carrier-protein) reductase compare
Atu2684 -1.4 -1.8 hypothetical protein compare
Atu1455 -1.4 -4.6 hypothetical protein compare
Atu2205 -1.4 -4.6 transcriptional regulator, MarR family compare
Atu2045 -1.3 -6.4 HFLK protein compare
Atu1457 -1.3 -2.9 hypothetical protein compare
Atu0769 -1.3 -1.8 protoheme IX farnesyltransferase compare
Atu0361 -1.3 -3.1 transcriptional regulator compare
Atu3998 -1.3 -8.3 8-amino-7-oxononanoate synthase compare
Atu0971 -1.3 -4.2 two component sensor kinase compare
Atu2832 -1.3 -4.2 tRNA modification GTPase compare
Atu0086 -1.3 -1.3 ribosome-binding factor A compare
Atu2801 -1.3 -3.4 precorrin-2 C20 methyltransferase compare
Atu2682 -1.3 -4.6 hypothetical protein compare
Atu2125 -1.2 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0368 -1.2 -5.8 tRNA pseudouridine synthase I compare
Atu2209 -1.2 -5.3 pyrroline-5-carboxylate reductase compare
Atu3727 -1.2 -3.5 hypothetical protein compare
Atu3999 -1.2 -2.9 dithiobiotin synthetase compare
Atu1163 -1.2 -2.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu6189 -1.1 -0.9 protein secretion chaperone compare
Atu1748 -1.1 -6.8 NIFU-like protein compare
Atu3732 -1.1 -5.4 hemolysin compare
Atu2796 -1.1 -4.7 precorrin-4 C11-methyltransferase compare
Atu4001 -1.1 -6.5 3-oxoacyl-ACP synthase compare
Atu2044 -1.1 -4.7 HFLC protein compare
Atu4000 -1.1 -7.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu3298 -1.1 -7.3 C4-dicarboxylate transporter DctA compare
Atu2640 -1.1 -4.1 hypothetical protein compare
Atu5115 -1.1 -1.3 hypothetical protein compare
Atu4317 -1.1 -2.9 TetR family transcriptional regulator compare
Atu0388 -1.1 -7.4 two component sensor kinase compare
Atu0029 -1.1 -3.8 S-adenosylhomocysteine hydrolase compare
Atu2798 -1.0 -3.7 precorrin-6y methyltransferase compare
Atu5451 -1.0 -0.7 hypothetical protein compare
Atu2831 -1.0 -4.5 glucose inhibited division protein A compare
Atu2797 -1.0 -2.9 cobalamin biosynthesis protein compare
Atu2793 -1.0 -4.0 cobyrinic acid a,c-diamide synthase compare
Atu2234 -1.0 -2.8 hypothetical protein compare
Atu1372 -1.0 -3.8 hypothetical protein compare
Atu2809 -1.0 -6.4 cobalamin biosynthesis protein compare
Atu3910 -1.0 -3.7 LamB/YcsF family protein compare
Atu0525 -1.0 -4.5 transcriptional regulator, LuxR family compare
Atu2800 -1.0 -1.8 precorrin-3B C17-methyltransferase compare
Atu4346 -1.0 -5.3 hypothetical protein compare
Atu2808 -0.9 -4.8 cobyric acid synthase compare
Atu2472 -0.9 -2.0 hypothetical protein compare
Atu5501 -0.9 -1.5 hypothetical protein compare
Atu4635 -0.9 -4.3 hypothetical protein compare
Atu2163 -0.9 -1.3 hypothetical protein compare
Atu3296 -0.9 -5.4 two component response regulator for C4-dicarboxylate transport compare
Atu2802 -0.9 -3.6 precorrin-8X methylmutase compare
Atu5513 -0.8 -0.8 cold shock protein compare
Atu0641 -0.8 -2.5 hypothetical protein compare
Atu0784 -0.8 -2.2 hypothetical protein compare
Atu2799 -0.8 -2.7 precorrin-6x reductase compare
Atu4097 -0.8 -5.3 L-aspartate oxidase compare
Atu3287 -0.8 -2.9 thiamine biosynthesis associated protein compare
Atu0141 -0.8 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu0190 -0.8 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0977 -0.8 -2.3 serine protease DO-like protease compare
Atu3461 -0.8 -1.9 GntR family transcriptional regulator compare
Atu2795 -0.8 -3.5 cobalamin biosynthetic protein compare
Atu2554 -0.8 -1.6 lysyl-tRNA synthetase compare
Atu8052 -0.8 -0.7 hypothetical protein compare
Atu1503 -0.8 -1.0 hypothetical protein compare
Atu2746 -0.8 -1.9 hypothetical protein compare
Atu1851 -0.8 -2.3 BolA/YrbA family protein compare
Atu3730 -0.8 -1.3 hypothetical protein compare
Atu1204 -0.8 -3.1 potassium uptake protein compare
Atu2804 -0.7 -5.3 cobaltochelatase subunit compare
Atu5475 -0.7 -1.3 hypothetical protein compare
Atu3886 -0.7 -4.4 lysophospholipase compare
Atu2692 -0.7 -2.2 intracellular septation protein compare
Atu2381 -0.7 -3.1 hypothetical protein compare
Atu2416 -0.7 -5.5 glutamine synthetase compare
Atu0152 -0.7 -1.1 hypothetical protein compare
Atu4896 -0.7 -1.2 acetyltransferase compare
Atu0479 -0.7 -3.0 ABC transporter, substrate binding protein (amino acid) compare
Atu3697 -0.7 -3.2 ATP-dependent protease LA 2 compare
Atu4200 -0.7 -2.0 hypothetical protein compare
Atu1810 -0.7 -0.9 hypothetical protein compare
Atu0502 -0.7 -3.3 acetyl-CoA acetyltransferase compare
Atu0947 -0.7 -2.9 transcriptional regulator, AsnC family compare
Atu0405 -0.7 -5.4 long-chain-fatty-acid-CoA-ligase compare
Atu8055 -0.7 -1.8 hypothetical protein compare
Atu1062 -0.7 -1.4 phosphatidylserine synthase compare
Atu0106 -0.7 -2.1 cold shock protein compare
Atu4217 -0.7 -0.6 TetR family transcriptional regulator compare
Atu2245 -0.7 -5.6 Na+/Pi-cotransporter compare
Atu1891 -0.7 -1.7 cobalamin biosynthesis protein compare
Atu0923 -0.7 -3.5 hypothetical protein compare
Atu2207 -0.7 -1.4 two component sensor kinase compare
Atu2555 -0.7 -2.3 L-lysine 2,3-aminomutase compare
Atu0503 -0.7 -4.7 enoyl-CoA hydratase compare
Atu1445 -0.7 -2.1 two component sensor kinase compare
Atu2803 -0.7 -2.0 Cobalamin biosynthesis associated protein compare
Atu8131 -0.6 -5.0 pH adaption potassium efflux system protein compare
Atu0658 -0.6 -3.8 phosphate permease compare
Atu4616 -0.6 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu2807 -0.6 -3.3 cob(I)alamin adenosyltransferase compare
Atu5155 -0.6 -1.9 MarR family transcriptional regulator compare
Atu0188 -0.6 -2.5 ABC transporter, membrane spanning protein (peptide) compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium Fumarate dibasic in Agrobacterium fabrum C58

For carbon source Sodium Fumarate dibasic across organisms