Experiment set1IT067 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Sodium Chlorite 0.2 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_15885 +1.5 7.6 TetR family transcriptional regulator compare
CA264_19450 +1.1 5.9 type I methionyl aminopeptidase compare
CA264_19045 +1.1 5.1 acyl-CoA dehydrogenase compare
CA264_17565 +0.9 1.3 hypothetical protein compare
CA264_01545 +0.9 3.5 3-deoxy-7-phosphoheptulonate synthase compare
CA264_20060 +0.9 2.5 ribosome silencing factor RsfS compare
CA264_14540 +0.9 4.5 NADP-dependent malic enzyme compare
CA264_03330 +0.9 1.9 peptide-methionine (R)-S-oxide reductase compare
CA264_02595 +0.8 2.4 oxidoreductase compare
CA264_01740 +0.8 1.9 proton-translocating NADH-quinone oxidoreductase subunit N compare
CA264_20635 +0.8 1.8 thioredoxin family protein compare
CA264_18245 +0.8 2.3 NADH-quinone oxidoreductase subunit A compare
CA264_19820 +0.8 4.6 dessication-associated protein compare
CA264_01820 +0.8 4.5 hypothetical protein compare
CA264_19825 +0.8 4.6 Tat (twin-arginine translocation) pathway signal sequence containing protein compare
CA264_10520 +0.8 2.5 molybdopterin synthase sulfur carrier subunit compare
CA264_06070 +0.8 1.5 kinase compare
CA264_05400 +0.8 4.4 MarR family transcriptional regulator compare
CA264_16355 +0.8 2.5 gliding motility protein GldN compare
CA264_20010 +0.8 3.8 gliding motility lipoprotein GldH compare
CA264_18775 +0.8 1.3 hypothetical protein compare
CA264_08080 +0.8 3.4 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_17235 +0.7 4.9 gliding motility lipoprotein GldJ compare
CA264_16360 +0.7 3.7 gliding motility protein GldM compare
CA264_18675 +0.7 3.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
CA264_08140 +0.7 3.3 oxidoreductase compare
CA264_02180 +0.7 1.4 response regulator compare
CA264_21265 +0.7 3.4 hypothetical protein compare
CA264_15355 +0.7 1.7 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase compare
CA264_08870 +0.7 3.5 imidazolonepropionase compare
CA264_18270 +0.7 1.1 hypothetical protein compare
CA264_15360 +0.6 4.4 permease compare
CA264_15955 +0.6 3.2 glycine C-acetyltransferase compare
CA264_17860 +0.6 3.4 tRNA dihydrouridine synthase DusB compare
CA264_21320 +0.6 3.0 hypothetical protein compare
CA264_08120 +0.6 3.8 electron transfer flavoprotein subunit alpha compare
CA264_10045 +0.6 1.0 hypothetical protein compare
CA264_20110 +0.6 2.5 DNA helicase RecQ compare
CA264_13980 +0.6 4.3 alpha-glucuronidase compare
CA264_13385 +0.6 4.6 hypoxanthine phosphoribosyltransferase compare
CA264_02350 +0.6 3.5 nicotinate phosphoribosyltransferase compare
CA264_12440 +0.6 1.3 methionyl-tRNA formyltransferase compare
CA264_03230 +0.6 4.3 hypothetical protein compare
CA264_19860 +0.6 3.0 NifU family protein compare
CA264_16365 +0.6 3.1 gliding motility protein GldL compare
CA264_03225 +0.6 2.5 hypothetical protein compare
CA264_08070 +0.6 3.7 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA264_01935 +0.6 3.9 DNA-binding response regulator compare
CA264_20625 +0.6 4.7 methylcrotonoyl-CoA carboxylase compare
CA264_04285 +0.6 1.4 hypothetical protein compare
CA264_08075 +0.6 2.2 gliding motility-associated ABC transporter permease subunit GldF compare
CA264_21300 +0.6 0.9 hypothetical protein compare
CA264_01815 +0.6 2.0 N-acetyltransferase compare
CA264_13100 +0.6 1.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
CA264_09185 +0.6 3.1 hypothetical protein compare
CA264_14180 +0.6 3.4 transcriptional regulator compare
CA264_21225 +0.6 1.5 hypothetical protein compare
CA264_15880 +0.6 1.8 5-formyltetrahydrofolate cyclo-ligase compare
CA264_14560 +0.6 1.3 VanZ family protein compare
CA264_13645 +0.6 1.6 hypothetical protein compare
CA264_08005 +0.6 1.0 phosphonate ABC transporter ATP-binding protein compare
CA264_10305 +0.6 0.9 hypothetical protein compare
CA264_03235 +0.6 4.3 hypothetical protein compare
CA264_21270 +0.6 4.1 hypothetical protein compare
CA264_06335 +0.6 1.8 Na+/H+ antiporter subunit G compare
CA264_09985 +0.5 1.0 hypothetical protein compare
CA264_03810 +0.5 1.5 hypothetical protein compare
CA264_17390 +0.5 2.2 hypothetical protein compare
CA264_01725 +0.5 1.7 NADH-quinone oxidoreductase subunit K compare
CA264_13420 +0.5 2.5 hypothetical protein compare
CA264_06925 +0.5 2.2 acetolactate synthase small subunit compare
CA264_09735 +0.5 1.3 5-hydroxyisourate hydrolase compare
CA264_20440 +0.5 1.2 thiamine biosynthesis protein ThiS compare
CA264_14420 +0.5 3.2 hypothetical protein compare
CA264_15500 +0.5 1.7 hypothetical protein compare
CA264_19090 +0.5 1.5 hypothetical protein compare
CA264_15260 +0.5 1.1 glutamine amidotransferase compare
CA264_02945 +0.5 1.3 hypothetical protein compare
CA264_02450 +0.5 2.1 hypothetical protein compare
CA264_21335 +0.5 1.0 hypothetical protein compare
CA264_12355 +0.5 3.4 polysaccharide deacetylase compare
CA264_12195 +0.5 2.2 DoxX family protein compare
CA264_08250 +0.5 2.1 hypothetical protein compare
CA264_21285 +0.5 1.5 hypothetical protein compare
CA264_18020 +0.5 1.4 ABC transporter permease compare
CA264_17310 +0.5 3.2 hypothetical protein compare
CA264_21330 +0.5 3.1 MBL fold metallo-hydrolase compare
CA264_03240 +0.5 3.9 metal transporter compare
CA264_00330 +0.5 2.8 hypothetical protein compare
CA264_02920 +0.5 2.2 response regulator compare
CA264_17800 +0.5 1.7 tRNA-Val compare
CA264_04100 +0.5 2.2 twin-arginine translocase TatA/TatE family subunit compare
CA264_14805 +0.5 1.0 DNA-binding protein compare
CA264_16370 +0.5 3.2 gliding motility lipoprotein GldK compare
CA264_19535 +0.5 2.7 hypothetical protein compare
CA264_21465 +0.5 1.1 hypothetical protein compare
CA264_07620 +0.5 2.1 hypothetical protein compare
CA264_04350 +0.5 2.1 alanine dehydrogenase compare
CA264_01540 +0.5 2.6 hypothetical protein compare
CA264_18515 +0.5 1.9 GntR family transcriptional regulator compare
CA264_06330 +0.5 1.3 cation:proton antiporter compare
CA264_19530 +0.5 3.1 hypothetical protein compare
CA264_13990 +0.5 2.8 1,4-beta-xylanase compare
CA264_05185 +0.5 2.5 hypothetical protein compare
CA264_17045 +0.5 2.9 serine hydroxymethyltransferase compare
CA264_04155 +0.5 1.7 hypothetical protein compare
CA264_14290 +0.5 2.7 glycosyl transferase family 2 compare
CA264_06530 +0.5 1.9 peptidase compare
CA264_16100 +0.5 1.1 hypothetical protein compare
CA264_19010 +0.5 4.2 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_11995 +0.4 1.4 hypothetical protein compare
CA264_02840 +0.4 2.7 hypothetical protein compare
CA264_20570 +0.4 1.2 inorganic pyrophosphatase compare
CA264_08410 +0.4 2.1 CRISPR-associated endonuclease Cas2 compare
CA264_07900 +0.4 2.1 hypothetical protein compare
CA264_12625 +0.4 0.8 RDD family protein compare
CA264_11195 +0.4 2.3 phosphatase compare
CA264_11865 +0.4 1.3 hypothetical protein compare
CA264_20355 +0.4 1.3 DUF421 domain-containing protein compare
CA264_00810 +0.4 1.7 phospholipase compare
CA264_15010 +0.4 1.5 gliding motility lipoprotein GldD compare
CA264_03470 +0.4 1.7 short-chain dehydrogenase compare
CA264_21325 +0.4 3.6 copper-translocating P-type ATPase compare
CA264_18190 +0.4 1.9 hypothetical protein compare
CA264_21260 +0.4 3.5 cation transporter compare
CA264_08230 +0.4 1.2 TetR family transcriptional regulator compare
CA264_01180 +0.4 1.4 hypothetical protein compare
CA264_05410 +0.4 2.0 hypothetical protein compare
CA264_00140 +0.4 2.4 hypothetical protein compare
CA264_09690 +0.4 1.5 hypothetical protein compare
CA264_12340 +0.4 1.6 acetyltransferase compare
CA264_02065 +0.4 1.3 hypothetical protein compare
CA264_12540 +0.4 2.6 glycoside hydrolase compare
CA264_15265 +0.4 2.3 colicin v production protein compare
CA264_01730 +0.4 3.0 NADH-quinone oxidoreductase subunit L compare
CA264_09330 +0.4 1.6 cold-shock protein compare
CA264_14405 +0.4 2.0 hypothetical protein compare
CA264_06895 +0.4 1.8 hypothetical protein compare
CA264_06815 +0.4 2.9 iron-sulfur cluster repair di-iron protein compare
CA264_03690 +0.4 3.0 efflux transporter periplasmic adaptor subunit compare
CA264_05110 +0.4 1.7 imidazole glycerol phosphate synthase cyclase subunit compare
CA264_16580 +0.4 1.1 aminoacyl-tRNA hydrolase compare
CA264_12910 +0.4 1.4 acyl-CoA-binding protein compare
CA264_09800 +0.4 2.1 DNA-binding response regulator compare
CA264_01810 +0.4 1.8 hypothetical protein compare
CA264_18525 +0.4 1.8 hypothetical protein compare
CA264_12280 +0.4 0.7 hypothetical protein compare
CA264_08940 +0.4 2.1 cysteine synthase B compare
CA264_12315 +0.4 2.5 fumarylacetoacetase compare
CA264_11970 +0.4 0.6 hypothetical protein compare
CA264_03245 +0.4 1.5 four helix bundle protein compare
CA264_15945 +0.4 2.3 NAD-dependent epimerase compare
CA264_05240 +0.4 2.2 glycerol acyltransferase compare
CA264_12555 +0.4 2.6 protein-L-isoaspartate O-methyltransferase compare
CA264_13605 +0.4 1.8 hypothetical protein compare
CA264_16130 +0.4 1.3 TetR family transcriptional regulator compare
CA264_17830 +0.4 2.0 transcriptional regulator compare
CA264_18965 +0.4 2.4 hypothetical protein compare
CA264_11915 +0.4 1.1 peptidoglycan synthetase compare
CA264_15330 +0.4 3.3 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_18880 +0.4 1.8 hypothetical protein compare
CA264_17745 +0.4 2.2 TetR family transcriptional regulator compare
CA264_04785 +0.4 1.6 hypothetical protein compare
CA264_04740 +0.4 1.0 arsenate reductase (glutaredoxin) compare
CA264_15720 +0.4 1.3 phosphohistidine phosphatase compare
CA264_20245 +0.4 2.1 hypothetical protein compare
CA264_03485 +0.4 1.2 dodecin compare
CA264_12755 +0.4 1.9 SAM-dependent methyltransferase compare
CA264_13220 +0.4 1.6 kazal domain protein compare
CA264_13975 +0.4 1.8 LacI family transcriptional regulator compare
CA264_16965 +0.4 2.2 hypothetical protein compare
CA264_01915 +0.4 2.2 hypothetical protein compare
CA264_11215 +0.4 1.8 N-acetyltransferase compare
CA264_18750 +0.4 2.2 FmdC precursor compare
CA264_01015 +0.4 2.5 glycoside hydrolase compare
CA264_12350 +0.4 2.3 glycosyltransferase family 1 protein compare
CA264_03445 +0.4 2.5 anhydro-N-acetylmuramic acid kinase compare
CA264_17495 +0.3 1.9 hypothetical protein compare
CA264_03090 +0.3 2.0 hypothetical protein compare
CA264_11890 +0.3 1.3 NADH oxidase compare
CA264_09005 +0.3 1.0 hypothetical protein compare
CA264_02590 +0.3 1.8 ribosomal subunit interface protein compare
CA264_11670 +0.3 1.7 DNA repair protein compare
CA264_17180 +0.3 0.9 hypothetical protein compare
CA264_03385 +0.3 1.5 hypothetical protein compare
CA264_13155 +0.3 1.5 response regulator compare
CA264_18045 +0.3 1.0 hypothetical protein compare
CA264_03095 +0.3 2.2 hypothetical protein compare
CA264_18260 +0.3 1.4 NADH-quinone oxidoreductase subunit C compare
CA264_12855 +0.3 1.1 hypothetical protein compare
CA264_02985 +0.3 1.9 NAD(P)-dependent oxidoreductase compare
CA264_12535 +0.3 2.3 hypothetical protein compare
CA264_21480 +0.3 1.6 hypothetical protein compare
CA264_05180 +0.3 2.4 hypothetical protein compare
CA264_00765 +0.3 1.1 hypothetical protein compare
CA264_00885 +0.3 2.1 hypothetical protein compare
CA264_03250 +0.3 2.3 metal transporter compare
CA264_13765 +0.3 1.9 DNA-binding transcriptional regulator OxyR compare
CA264_01020 +0.3 1.9 hypothetical protein compare
CA264_16570 +0.3 2.0 hypothetical protein compare


Specific Phenotypes

For 9 genes in this experiment

For stress Sodium Chlorite in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Sodium Chlorite across organisms