Experiment set1IT065 for Rhizobium sp. OAE497

Compare to:

L-Alanine carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS01415 -5.4 -2.3 cysteine synthase A compare
ABIE40_RS17530 -5.0 -3.5 diaminopimelate decarboxylase compare
ABIE40_RS03665 -4.9 -3.4 ATP phosphoribosyltransferase compare
ABIE40_RS10725 -4.8 -3.3 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS19435 -4.8 -2.0 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS03660 -4.6 -4.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS06930 -4.5 -3.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS09725 -4.5 -3.1 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS19440 -4.4 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.4 -3.0 phosphoribosylanthranilate isomerase compare
ABIE40_RS11175 -4.1 -4.9 cobyric acid synthase compare
ABIE40_RS19050 -4.1 -7.7 3-isopropylmalate dehydrogenase compare
ABIE40_RS02725 -4.1 -7.8 histidinol dehydrogenase compare
ABIE40_RS16320 -4.0 -8.1 histidinol-phosphatase compare
ABIE40_RS09360 -4.0 -4.7 excinuclease ABC subunit UvrA compare
ABIE40_RS20455 -4.0 -1.7 precorrin-8X methylmutase compare
ABIE40_RS30285 -3.9 -1.0 co-chaperone GroES compare
ABIE40_RS20460 -3.9 -2.8 precorrin-3B synthase compare
ABIE40_RS09660 -3.9 -12.9 AI-2E family transporter compare
ABIE40_RS11495 -3.9 -4.6 acetolactate synthase 3 large subunit compare
ABIE40_RS19460 -3.9 -9.6 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS16570 -3.8 -3.4 tetratricopeptide repeat protein compare
ABIE40_RS14985 -3.7 -1.8 glycosyltransferase compare
ABIE40_RS13330 -3.7 -14.7 2-isopropylmalate synthase compare
ABIE40_RS08005 -3.7 -2.3 dihydroxy-acid dehydratase compare
ABIE40_RS03405 -3.6 -2.2 anti-sigma factor compare
ABIE40_RS19445 -3.6 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS06050 -3.5 -5.8 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS09095 -3.5 -4.1 PAS domain-containing sensor histidine kinase compare
ABIE40_RS01135 -3.5 -0.9 50S ribosomal protein L20 compare
ABIE40_RS06720 -3.5 -1.9 transcriptional regulator NrdR compare
ABIE40_RS14980 -3.4 -5.2 glycoside hydrolase family 16 protein compare
ABIE40_RS30655 -3.4 -2.0 hypothetical protein compare
ABIE40_RS19480 -3.4 -2.3 DUF1402 family protein compare
ABIE40_RS15920 -3.4 -0.8 50S ribosomal protein L31 compare
ABIE40_RS18920 -3.4 -4.0 glutamate 5-kinase compare
ABIE40_RS20435 -3.3 -3.2 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS00580 -3.3 -2.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS19700 -3.3 -2.2 MBL fold metallo-hydrolase compare
ABIE40_RS07805 -3.2 -1.5 hypothetical protein compare
ABIE40_RS13410 -3.2 -7.6 anthranilate synthase compare
ABIE40_RS17650 -3.2 -5.6 cobaltochelatase subunit CobS compare
ABIE40_RS12925 -3.1 -11.5 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS17590 -3.1 -2.1 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS15740 -3.1 -2.3 type II toxin-antitoxin system VapC family toxin compare
ABIE40_RS15730 -3.0 -2.7 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS18380 -3.0 -11.3 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS20450 -3.0 -2.8 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS11950 -2.9 -6.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS20430 -2.9 -2.6 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS05660 -2.8 -2.9 response regulator transcription factor compare
ABIE40_RS17595 -2.8 -5.9 histidinol-phosphate transaminase compare
ABIE40_RS19040 -2.7 -5.4 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS01970 -2.7 -2.0 acetylglutamate kinase compare
ABIE40_RS09320 -2.7 -10.1 extracellular solute-binding protein compare
ABIE40_RS19395 -2.6 -2.7 PTS sugar transporter subunit IIA compare
ABIE40_RS14990 -2.6 -8.4 glycosyltransferase family 2 protein compare
ABIE40_RS21990 -2.6 -0.9 organic hydroperoxide resistance protein compare
ABIE40_RS17645 -2.6 -4.7 cobaltochelatase subunit CobT compare
ABIE40_RS08970 -2.6 -7.9 citrate synthase compare
ABIE40_RS19450 -2.6 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS09090 -2.6 -6.9 nitrogen regulation protein NR(I) compare
ABIE40_RS08330 -2.6 -2.4 hypothetical protein compare
ABIE40_RS27235 -2.6 -2.2 hypothetical protein compare
ABIE40_RS11955 -2.6 -4.9 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS12135 -2.6 -5.9 methionine synthase compare
ABIE40_RS22665 -2.6 -1.8 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS23635 -2.6 -0.8 hypothetical protein compare
ABIE40_RS24130 -2.5 -2.1 ABC transporter permease compare
ABIE40_RS09545 -2.5 -1.9 anthranilate phosphoribosyltransferase compare
ABIE40_RS19365 -2.5 -3.0 double-strand break repair protein AddB compare
ABIE40_RS23340 -2.5 -2.3 MSMEG_0567/Sll0786 family nitrogen starvation N-acetyltransferase compare
ABIE40_RS02405 -2.5 -2.7 response regulator transcription factor compare
ABIE40_RS00630 -2.5 -7.5 ABC transporter ATP-binding protein compare
ABIE40_RS06560 -2.4 -5.1 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS20090 -2.3 -3.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS00930 -2.3 -6.1 ABC transporter permease compare
ABIE40_RS30520 -2.3 -0.7 hypothetical protein compare
ABIE40_RS00625 -2.3 -7.0 ABC transporter permease compare
ABIE40_RS17060 -2.2 -1.1 OsmC family protein compare
ABIE40_RS18590 -2.2 -7.6 homoserine O-succinyltransferase compare
ABIE40_RS23665 -2.2 -1.7 hypothetical protein compare
ABIE40_RS26255 -2.2 -0.9 hypothetical protein compare
ABIE40_RS19120 -2.2 -13.9 NAD-glutamate dehydrogenase compare
ABIE40_RS03485 -2.1 -8.5 MAPEG family protein compare
ABIE40_RS10180 -2.1 -3.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS08410 -2.1 -2.5 hypothetical protein compare
ABIE40_RS11095 -2.1 -3.7 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS17565 -2.1 -2.0 ABC transporter permease compare
ABIE40_RS01015 -2.1 -2.2 NrsF family protein compare
ABIE40_RS20505 -2.1 -2.5 hypothetical protein compare
ABIE40_RS24310 -2.1 -5.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS25320 -2.1 -2.4 GntR family transcriptional regulator compare
ABIE40_RS17525 -2.0 -1.4 lipoprotein compare
ABIE40_RS14955 -2.0 -5.3 sugar transferase compare
ABIE40_RS16070 -2.0 -2.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS05665 -2.0 -2.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS25500 -1.9 -0.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS03025 -1.9 -2.5 flagellin compare
ABIE40_RS28065 -1.9 -1.4 hypothetical protein compare
ABIE40_RS28600 -1.9 -0.9 FAD-dependent oxidoreductase compare
ABIE40_RS06775 -1.8 -1.4 DUF177 domain-containing protein compare
ABIE40_RS03735 -1.8 -2.4 antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein compare
ABIE40_RS20635 -1.8 -2.0 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS18975 -1.8 -6.0 S41 family peptidase compare
ABIE40_RS20465 -1.8 -3.6 precorrin-6A synthase (deacetylating) compare
ABIE40_RS10425 -1.7 -3.5 ABC transporter ATP-binding protein compare
ABIE40_RS09155 -1.7 -3.1 DUF934 domain-containing protein compare
ABIE40_RS14220 -1.7 -1.0 efflux transporter outer membrane subunit compare
ABIE40_RS26850 -1.7 -1.1 hypothetical protein compare
ABIE40_RS18640 -1.7 -6.4 M48 family metalloprotease compare
ABIE40_RS20445 -1.7 -1.0 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS01765 -1.7 -3.5 [protein-PII] uridylyltransferase compare
ABIE40_RS04215 -1.7 -1.8 sensor domain-containing phosphodiesterase compare
ABIE40_RS05365 -1.7 -4.1 tetratricopeptide repeat protein compare
ABIE40_RS00620 -1.7 -4.7 microcin C ABC transporter permease YejB compare
ABIE40_RS28420 -1.7 -1.3 30S ribosomal protein S21 compare
ABIE40_RS11155 -1.7 -5.2 cobaltochelatase subunit CobN compare
ABIE40_RS26730 -1.7 -1.5 hypothetical protein compare
ABIE40_RS22100 -1.6 -1.1 helix-turn-helix domain-containing protein compare
ABIE40_RS04785 -1.6 -1.2 hypothetical protein compare
ABIE40_RS15650 -1.6 -5.3 TIGR00282 family metallophosphoesterase compare
ABIE40_RS07315 -1.6 -1.3 hypothetical protein compare
ABIE40_RS04040 -1.6 -1.2 pyrophosphatase compare
ABIE40_RS16660 -1.6 -2.3 GTP-binding protein compare
ABIE40_RS19130 -1.6 -3.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS00725 -1.6 -2.5 DNA cytosine methyltransferase compare
ABIE40_RS10485 -1.6 -2.1 DUF1003 domain-containing protein compare
ABIE40_RS20440 -1.6 -1.3 cobalt-precorrin-6A reductase compare
ABIE40_RS15890 -1.6 -4.4 fructose bisphosphate aldolase compare
ABIE40_RS27500 -1.6 -1.7 PPC domain-containing DNA-binding protein compare
ABIE40_RS12860 -1.6 -0.7 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS02960 -1.6 -3.6 flagellar protein export ATPase FliI compare
ABIE40_RS11150 -1.5 -3.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS00925 -1.5 -3.8 ABC transporter permease compare
ABIE40_RS22200 -1.5 -1.1 type II toxin-antitoxin system ParD family antitoxin compare
ABIE40_RS18125 -1.5 -4.2 translational GTPase TypA compare
ABIE40_RS18770 -1.5 -1.1 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS00245 -1.5 -4.8 prephenate dehydratase compare
ABIE40_RS12115 -1.5 -1.4 GntR family transcriptional regulator compare
ABIE40_RS01730 -1.5 -1.1 NifU family protein compare
ABIE40_RS09540 -1.5 -4.1 peptidylprolyl isomerase compare
ABIE40_RS22755 -1.5 -1.0 exopolysaccharide biosynthesis protein compare
ABIE40_RS09800 -1.5 -2.6 MerR family DNA-binding transcriptional regulator compare
ABIE40_RS12295 -1.5 -2.5 hypothetical protein compare
ABIE40_RS09045 -1.5 -1.9 GlsB/YeaQ/YmgE family stress response membrane protein compare
ABIE40_RS00340 -1.5 -1.6 30S ribosome-binding factor RbfA compare
ABIE40_RS29515 -1.5 -1.4 hypothetical protein compare
ABIE40_RS14600 -1.5 -3.1 GGDEF domain-containing protein compare
ABIE40_RS18880 -1.5 -5.1 UDP-glucose 4-epimerase GalE compare
ABIE40_RS13385 -1.5 -2.1 Isoquinoline 1-oxidoreductase subunit compare
ABIE40_RS15010 -1.5 -5.2 metallophosphoesterase compare
ABIE40_RS19360 -1.4 -2.7 double-strand break repair helicase AddA compare
ABIE40_RS28310 -1.4 -1.3 DoxX family protein compare
ABIE40_RS27155 -1.4 -1.8 acetyltransferase compare
ABIE40_RS19260 -1.4 -1.8 DNA polymerase III subunit epsilon compare
ABIE40_RS19100 -1.4 -4.3 lytic transglycosylase domain-containing protein compare
ABIE40_RS11910 -1.4 -4.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS11105 -1.4 -3.6 cobyrinate a,c-diamide synthase compare
ABIE40_RS28920 -1.4 -0.9 response regulator compare
ABIE40_RS02325 -1.4 -1.7 ornithine carbamoyltransferase compare
ABIE40_RS07260 -1.4 -6.7 ribonuclease J compare
ABIE40_RS12615 -1.4 -2.1 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
ABIE40_RS28385 -1.4 -1.6 MgtC/SapB family protein compare
ABIE40_RS17020 -1.4 -4.4 sugar-binding transcriptional regulator compare
ABIE40_RS06620 -1.4 -2.0 HNH endonuclease signature motif containing protein compare
ABIE40_RS28955 -1.4 -2.7 hypothetical protein compare
ABIE40_RS11065 -1.3 -1.7 zinc-binding dehydrogenase compare
ABIE40_RS10850 -1.3 -3.1 excinuclease ABC subunit UvrB compare
ABIE40_RS26010 -1.3 -0.9 aldolase/citrate lyase family protein compare
ABIE40_RS04430 -1.3 -4.2 hypothetical protein compare
ABIE40_RS06710 -1.3 -1.4 L,D-transpeptidase family protein compare
ABIE40_RS30545 -1.3 -1.7 DUF982 domain-containing protein compare
ABIE40_RS08635 -1.3 -4.8 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS18925 -1.3 -3.1 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS29945 -1.3 -1.6 hypothetical protein compare
ABIE40_RS29800 -1.3 -2.7 hypothetical protein compare
ABIE40_RS06770 -1.3 -2.0 ubiquinol-cytochrome C chaperone family protein compare
ABIE40_RS16170 -1.2 -1.3 DUF882 domain-containing protein compare
ABIE40_RS11945 -1.2 -3.3 lytic murein transglycosylase compare
ABIE40_RS11605 -1.2 -4.9 AsmA-like C-terminal region-containing protein compare
ABIE40_RS18400 -1.2 -2.6 cyclic nucleotide-binding domain-containing protein compare
ABIE40_RS06160 -1.2 -3.7 TIGR02301 family protein compare
ABIE40_RS19615 -1.2 -1.2 DUF1109 domain-containing protein compare
ABIE40_RS11875 -1.2 -0.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS00640 -1.2 -1.0 hypothetical protein compare
ABIE40_RS26075 -1.2 -3.0 RidA family protein compare
ABIE40_RS06700 -1.2 -2.0 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS28120 -1.2 -1.4 MFS transporter compare
ABIE40_RS05155 -1.2 -1.9 DUF5330 domain-containing protein compare
ABIE40_RS27255 -1.1 -1.0 hypothetical protein compare
ABIE40_RS11060 -1.1 -1.6 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS01055 -1.1 -2.5 translation elongation factor 4 compare
ABIE40_RS00255 -1.1 -1.4 hypothetical protein compare
ABIE40_RS15760 -1.1 -2.4 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS27930 -1.1 -0.5 nuclear transport factor 2 family protein compare
ABIE40_RS19650 -1.1 -1.6 3-carboxy-cis,cis-muconate cycloisomerase compare
ABIE40_RS02385 -1.1 -2.9 transporter substrate-binding domain-containing protein compare
ABIE40_RS25665 -1.1 -1.9 DUF2160 domain-containing protein compare
ABIE40_RS08170 -1.1 -0.8 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source L-Alanine in Rhizobium sp. OAE497

For carbon source L-Alanine across organisms