Experiment set1IT064 for Magnetospirillum magneticum AMB-1

Compare to:

150_nonmag_2

200 most important genes:

  gene name fitness t score description  
AMB_RS16705 -5.9 -0.9 LysR family transcriptional regulator compare
AMB_RS05990 -5.3 -1.3 hypothetical protein compare
AMB_RS08190 -5.2 -1.3 hypothetical protein compare
AMB_RS00010 -5.0 -1.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS11525 -5.0 -1.3 hypothetical protein compare
AMB_RS10475 -5.0 -1.3 transcriptional regulator NrdR compare
AMB_RS01605 -4.9 -1.4 aspartate aminotransferase family protein compare
AMB_RS12935 -4.9 -0.7 hypothetical protein compare
AMB_RS01910 -4.6 -1.4 head decoration protein compare
AMB_RS18590 -4.6 -1.3 glycosyltransferase family 2 protein compare
AMB_RS18930 -4.5 -0.7 Flp pilus assembly protein CpaB compare
AMB_RS22150 -4.1 -0.8 MarR family transcriptional regulator compare
AMB_RS15445 -3.9 -1.8 hypothetical protein compare
AMB_RS09845 -3.7 -2.0 hypothetical protein compare
AMB_RS14520 -3.7 -2.0 1,4-beta-N-acetylmuramidase compare
AMB_RS16700 -3.5 -0.7 nuclease PIN compare
AMB_RS06045 -3.5 -0.5 hypothetical protein compare
AMB_RS09780 -3.4 -1.4 DUF2312 domain-containing protein compare
AMB_RS20755 -3.3 -1.7 recombination protein RecR compare
AMB_RS12355 -3.3 -0.7 ABC transporter ATP-binding protein compare
AMB_RS21290 -3.3 -0.9 DUF4139 domain-containing protein compare
AMB_RS18380 -3.3 -2.7 methyl-accepting chemotaxis protein compare
AMB_RS02725 -3.2 -1.3 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS12855 -3.2 -2.5 hypothetical protein compare
AMB_RS02025 -3.1 -0.6 hypothetical protein compare
AMB_RS23930 -3.0 -1.7 hypothetical protein compare
AMB_RS02825 -3.0 -3.3 phasin compare
AMB_RS14025 -2.8 -1.6 tRNA-Val compare
AMB_RS03835 -2.8 -1.3 YicC family protein compare
AMB_RS23245 -2.7 -1.1 Ni,Fe-hydrogenase maturation factor compare
AMB_RS13525 -2.6 -1.5 ferredoxin-type protein NapG compare
AMB_RS24645 -2.5 -2.1 DUF423 domain-containing protein compare
AMB_RS16080 -2.5 -1.8 tRNA-Glu compare
AMB_RS12825 -2.5 -1.8 phosphatidylglycerophosphatase A compare
AMB_RS07105 -2.5 -1.9 Lrp/AsnC family transcriptional regulator compare
AMB_RS04460 -2.4 -1.7 hypothetical protein compare
AMB_RS18145 -2.4 -3.5 GntR family transcriptional regulator compare
AMB_RS09970 -2.3 -0.5 NAD synthetase compare
AMB_RS01830 -2.3 -0.3 hypothetical protein compare
AMB_RS07605 -2.2 -1.2 hypothetical protein compare
AMB_RS03725 -2.2 -5.2 DNA helicase II compare
AMB_RS16025 -2.2 -3.3 MFS transporter compare
AMB_RS21385 -2.1 -5.9 helix-turn-helix transcriptional regulator compare
AMB_RS04280 -2.1 -8.4 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS07230 -2.1 -2.6 response regulator compare
AMB_RS22380 -2.1 -1.4 cytochrome C4 precursor compare
AMB_RS18370 -2.0 -0.3 hypothetical protein compare
AMB_RS00480 -1.9 -3.9 methyltransferase domain-containing protein compare
AMB_RS06155 -1.9 -2.2 hypothetical protein compare
AMB_RS10350 -1.9 -1.7 DNA polymerase III subunit epsilon compare
AMB_RS05910 -1.9 -1.1 hypothetical protein compare
AMB_RS13870 -1.9 -1.7 DNA gyrase inhibitor compare
AMB_RS19405 -1.9 -1.9 DUF1491 domain-containing protein compare
AMB_RS03015 -1.8 -1.8 hypothetical protein compare
AMB_RS07010 -1.8 -3.8 ATP-dependent helicase compare
AMB_RS10175 -1.8 -2.8 4Fe-4S dicluster domain-containing protein compare
AMB_RS07130 -1.8 -1.9 alpha/beta hydrolase compare
AMB_RS19790 -1.7 -2.3 NAD(P)-dependent oxidoreductase compare
AMB_RS14865 -1.7 -2.0 ModD protein compare
AMB_RS20830 -1.7 -1.5 peptide-methionine (R)-S-oxide reductase compare
AMB_RS17335 -1.7 -0.5 N-acyl-L-homoserine lactone synthetase compare
AMB_RS04025 -1.7 -1.7 glutathione S-transferase compare
AMB_RS14345 -1.6 -2.9 adenine phosphoribosyltransferase compare
AMB_RS16130 -1.6 -1.0 phosphoglycerate dehydrogenase compare
AMB_RS20120 -1.6 -1.3 VOC family protein compare
AMB_RS17110 -1.6 -3.3 methyl-accepting chemotaxis protein compare
AMB_RS13750 -1.6 -3.7 glucosamine-6-phosphate deaminase compare
AMB_RS23490 -1.5 -2.4 hypothetical protein compare
AMB_RS16715 -1.5 -1.0 hypothetical protein compare
AMB_RS00355 -1.5 -4.9 radical SAM protein compare
AMB_RS15570 -1.5 -1.3 signal transduction protein compare
AMB_RS10445 -1.5 -1.2 phage Gp37/Gp68 family protein compare
AMB_RS02100 -1.5 -2.2 transposase compare
AMB_RS04230 -1.5 -1.5 acyl-CoA thioesterase compare
AMB_RS04245 -1.5 -4.9 (R)-hydratase compare
AMB_RS07600 -1.5 -1.8 hypothetical protein compare
AMB_RS22710 -1.4 -1.4 MFS transporter compare
AMB_RS04720 -1.4 -1.9 response regulator compare
AMB_RS08580 -1.4 -0.7 hypothetical protein compare
AMB_RS08255 -1.4 -1.2 hypothetical protein compare
AMB_RS14595 -1.4 -2.2 acetoin utilization protein compare
AMB_RS14175 -1.4 -1.0 COQ9 family protein compare
AMB_RS13125 -1.4 -2.8 hypothetical protein compare
AMB_RS06840 -1.4 -1.4 hypothetical protein compare
AMB_RS22490 -1.4 -1.1 YdcF family protein compare
AMB_RS13185 -1.4 -1.7 hypothetical protein compare
AMB_RS18110 -1.4 -1.2 cAMP-binding protein compare
AMB_RS22800 -1.4 -1.8 glutathione synthase compare
AMB_RS07115 -1.4 -1.7 Lrp/AsnC family transcriptional regulator compare
AMB_RS01575 -1.4 -1.6 arsenate reductase (glutaredoxin) compare
AMB_RS14635 -1.4 -2.4 hypothetical protein compare
AMB_RS01895 -1.4 -1.1 hypothetical protein compare
AMB_RS22315 -1.4 -2.4 membrane protein compare
AMB_RS05505 -1.4 -3.2 GDP-mannose 4,6-dehydratase compare
AMB_RS21665 -1.4 -1.2 hypothetical protein compare
AMB_RS00240 -1.3 -1.3 hypothetical protein compare
AMB_RS20740 -1.3 -5.0 hypothetical protein compare
AMB_RS06665 -1.3 -1.5 LrgB family protein compare
AMB_RS06550 -1.3 -1.1 lysophospholipase compare
AMB_RS11640 -1.3 -1.4 UbiX family flavin prenyltransferase compare
AMB_RS02345 -1.3 -1.0 hypothetical protein compare
AMB_RS19875 -1.3 -0.7 hypothetical protein compare
AMB_RS04740 -1.3 -2.3 hypothetical protein compare
AMB_RS14290 -1.3 -3.3 exopolyphosphatase compare
AMB_RS24245 -1.3 -1.5 hypothetical protein compare
AMB_RS08695 -1.3 -1.0 hypothetical protein compare
AMB_RS23865 -1.3 -1.2 DUF2786 domain-containing protein compare
AMB_RS17565 -1.3 -2.6 hypothetical protein compare
AMB_RS12295 -1.3 -0.9 TatD family deoxyribonuclease compare
AMB_RS02650 -1.3 -3.1 uroporphyrinogen-III C-methyltransferase compare
AMB_RS09365 -1.3 -1.4 serine O-acetyltransferase compare
AMB_RS03615 -1.3 -1.4 hypothetical protein compare
AMB_RS07900 -1.3 -0.9 nitrogen fixation protein NifX compare
AMB_RS22770 -1.3 -1.5 radical SAM protein compare
AMB_RS14060 -1.3 -1.8 methyl-accepting chemotaxis protein compare
AMB_RS09545 -1.3 -2.6 hypothetical protein compare
AMB_RS18980 -1.3 -1.9 pilus assembly protein compare
AMB_RS04325 -1.2 -2.5 TetR/AcrR family transcriptional regulator compare
AMB_RS20805 -1.2 -1.3 isoprenoid biosynthesis protein ElbB compare
AMB_RS24580 -1.2 -2.9 hypothetical protein compare
AMB_RS24475 -1.2 -4.6 hypothetical protein compare
AMB_RS13180 -1.2 -1.0 protein rnfH compare
AMB_RS20660 -1.2 -1.1 hypothetical protein compare
AMB_RS17985 -1.2 -5.0 sulfite exporter TauE/SafE family protein compare
AMB_RS21040 -1.2 -1.0 hypothetical protein compare
AMB_RS19750 -1.2 -2.8 3-hydroxybutyryl-CoA dehydrogenase compare
AMB_RS07890 -1.2 -1.9 ferredoxin III, nif-specific compare
AMB_RS04680 -1.2 -0.9 transposase compare
AMB_RS00815 -1.2 -4.2 hypothetical protein compare
AMB_RS01995 -1.2 -0.8 DUF1833 domain-containing protein compare
AMB_RS12920 -1.2 -2.6 exo-beta-1,3-glucanase compare
AMB_RS13910 -1.2 -0.9 ABC transporter ATP-binding protein compare
AMB_RS24000 -1.2 -0.8 glycosyltransferase family 1 protein compare
AMB_RS10505 -1.2 -1.6 hypothetical protein compare
AMB_RS12320 -1.2 -1.4 septal ring lytic transglycosylase RlpA family protein compare
AMB_RS05115 -1.2 -1.9 hypothetical protein compare
AMB_RS17600 -1.2 -2.4 DNA-directed RNA polymerase specialized sigma subunit compare
AMB_RS14805 -1.1 -1.4 hypothetical protein compare
AMB_RS07700 -1.1 -1.0 hypothetical protein compare
AMB_RS22695 -1.1 -2.5 hypothetical protein compare
AMB_RS24655 -1.1 -2.3 LuxR family transcriptional regulator compare
AMB_RS04685 -1.1 -2.1 DNA-binding response regulator compare
AMB_RS15180 -1.1 -2.7 hypothetical protein compare
AMB_RS07805 -1.1 -1.3 hypothetical protein compare
AMB_RS13595 -1.1 -2.4 hypothetical protein compare
AMB_RS00805 -1.1 -4.9 haloacid dehalogenase compare
AMB_RS14200 -1.1 -1.6 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha compare
AMB_RS14035 -1.1 -2.1 endopeptidase La compare
AMB_RS11605 -1.1 -1.5 N-formylglutamate amidohydrolase compare
AMB_RS21905 -1.1 -3.1 hypothetical protein compare
AMB_RS17445 -1.1 -1.1 hypothetical protein compare
AMB_RS10705 -1.1 -0.8 hypothetical protein compare
AMB_RS15400 -1.1 -1.3 GntR family transcriptional regulator compare
AMB_RS23580 -1.1 -2.6 ImmA/IrrE family metallo-endopeptidase compare
AMB_RS17490 -1.1 -1.3 hypothetical protein compare
AMB_RS05560 -1.1 -1.2 hypothetical protein compare
AMB_RS07625 -1.1 -0.9 hypothetical protein compare
AMB_RS04320 -1.1 -1.4 DNA-binding response regulator compare
AMB_RS15280 -1.1 -1.4 hypothetical protein compare
AMB_RS11065 -1.1 -2.4 hypothetical protein compare
AMB_RS01970 -1.1 -1.1 hypothetical protein compare
AMB_RS11540 -1.1 -2.0 PAS domain-containing sensor histidine kinase compare
AMB_RS05940 -1.1 -1.1 hypothetical protein compare
AMB_RS23170 -1.1 -1.3 hypothetical protein compare
AMB_RS15295 -1.1 -0.8 iron donor protein CyaY compare
AMB_RS19325 -1.1 -4.2 NAD(P)/FAD-dependent oxidoreductase compare
AMB_RS05405 -1.1 -0.6 4Fe-4S dicluster domain-containing protein compare
AMB_RS02690 -1.0 -2.0 dihydropyrimidine dehydrogenase subunit A compare
AMB_RS04690 -1.0 -1.0 hypothetical protein compare
AMB_RS15215 -1.0 -2.5 methyltransferase domain-containing protein compare
AMB_RS14430 -1.0 -1.2 LexA repressor compare
AMB_RS12480 -1.0 -2.8 lactoylglutathione lyase compare
AMB_RS20350 -1.0 -2.4 aspartate 1-decarboxylase compare
AMB_RS23055 -1.0 -1.0 methylated-DNA--protein-cysteine methyltransferase compare
AMB_RS15550 -1.0 -1.8 copper chaperone PCu(A)C compare
AMB_RS23095 -1.0 -2.9 class I SAM-dependent methyltransferase compare
AMB_RS14095 -1.0 -2.2 DUF4131 domain-containing protein compare
AMB_RS10760 -1.0 -1.4 hypothetical protein compare
AMB_RS15595 -1.0 -0.7 hypothetical protein compare
AMB_RS01855 -1.0 -1.6 hypothetical protein compare
AMB_RS22535 -1.0 -1.7 hypothetical protein compare
AMB_RS17905 -1.0 -1.7 ATP-binding protein compare
AMB_RS22280 -1.0 -4.0 hypothetical protein compare
AMB_RS23800 -1.0 -1.9 ribosome silencing factor compare
AMB_RS02570 -1.0 -3.1 sigma-54-dependent Fis family transcriptional regulator compare
AMB_RS04635 -1.0 -2.0 site-specific integrase compare
AMB_RS07775 -1.0 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
AMB_RS11185 -1.0 -5.1 nitrite/sulfite reductase compare
AMB_RS02500 -1.0 -1.0 hypothetical protein compare
AMB_RS12410 -1.0 -3.3 excinuclease ABC subunit UvrA compare
AMB_RS08415 -1.0 -1.5 bacterioferritin compare
AMB_RS22085 -1.0 -8.4 cytochrome c oxidase accessory protein CcoG compare
AMB_RS16100 -0.9 -2.5 RNA polymerase sigma factor RpoH compare
AMB_RS11380 -0.9 -1.1 hemerythrin compare
AMB_RS08825 -0.9 -1.5 hypothetical protein compare
AMB_RS16250 -0.9 -1.2 hypothetical protein compare
AMB_RS05510 -0.9 -2.7 glycosyltransferase compare
AMB_RS23305 -0.9 -2.1 hypothetical protein compare
AMB_RS06670 -0.9 -1.5 CidA/LrgA family protein compare
AMB_RS15800 -0.9 -1.8 lytic transglycosylase domain-containing protein compare


Specific Phenotypes

None in this experiment

For Magnetospirillum magneticum AMB-1 in magnetic pulldown experiments

For magnetic pulldown Iron across organisms