Experiment set1IT064 for Serratia liquefaciens MT49

Compare to:

Manganese (II) chloride tetrahydrate 50 uM, aerobic

200 most detrimental genes:

  gene name fitness t score description  
IAI46_24465 +1.5 5.1 HTH-type transcriptional repressor FabR compare
IAI46_20760 +0.9 2.4 FAD assembly factor SdhE compare
IAI46_10760 +0.9 3.0 spore coat protein U domain-containing protein compare
IAI46_24255 +0.8 6.8 response regulator compare
IAI46_07875 +0.8 1.4 hypothetical protein compare
IAI46_01780 +0.8 4.2 gamma-glutamylcyclotransferase compare
IAI46_05545 +0.8 1.6 hypothetical protein compare
IAI46_06650 +0.8 3.2 tRNA dihydrouridine(16) synthase DusC compare
IAI46_15100 +0.8 2.9 hypothetical protein compare
IAI46_15965 +0.8 2.8 flagellar basal body P-ring formation protein FlgA compare
IAI46_12665 +0.8 2.2 aldehyde dehydrogenase family protein compare
IAI46_06975 +0.7 3.2 hypothetical protein compare
IAI46_18550 +0.7 1.3 YaiI/YqxD family protein compare
IAI46_07550 +0.7 2.8 adenylate kinase compare
IAI46_11810 +0.7 2.4 isochorismatase family protein compare
IAI46_12560 +0.7 1.4 hydrogenase formation protein HypD compare
IAI46_19345 +0.7 2.6 iron-sulfur cluster assembly protein IscA compare
IAI46_14600 +0.7 4.6 murein DD-endopeptidase MepM compare
IAI46_09320 +0.7 2.8 AlpA family phage regulatory protein compare
IAI46_24705 +0.7 1.5 rhodanese-like domain-containing protein compare
IAI46_15185 +0.7 3.3 DNA-binding protein compare
IAI46_16275 +0.6 1.1 hypothetical protein compare
IAI46_20515 +0.6 2.0 helix-turn-helix transcriptional regulator compare
IAI46_07015 +0.6 2.4 LysE family translocator compare
IAI46_11465 +0.6 1.8 electron transport complex subunit RsxG compare
IAI46_14560 +0.6 1.6 multidrug/spermidine efflux SMR transporter subunit MdtI compare
IAI46_11170 +0.6 2.5 cysteine desulfuration protein SufE compare
IAI46_19765 +0.6 1.5 hypothetical protein compare
IAI46_14350 +0.6 1.2 peptide-methionine (R)-S-oxide reductase MsrB compare
IAI46_11795 +0.6 1.5 xanthine dehydrogenase accessory protein XdhC compare
IAI46_17365 +0.6 1.0 YejL family protein compare
IAI46_09960 +0.6 3.0 phosphatase compare
IAI46_06695 +0.6 2.4 fimbrial protein compare
IAI46_06575 +0.6 1.1 cyclic pyranopterin monophosphate synthase MoaC compare
IAI46_01695 +0.6 0.8 DUF1471 domain-containing protein compare
IAI46_14385 +0.6 1.2 GNAT family N-acetyltransferase compare
IAI46_03890 +0.6 2.3 DedA family protein compare
IAI46_04805 +0.6 1.2 hypothetical protein compare
IAI46_09130 +0.5 1.3 universal stress protein compare
IAI46_13435 +0.5 1.7 hypothetical protein compare
IAI46_05175 +0.5 0.9 50S ribosomal protein L36 compare
IAI46_17235 +0.5 1.8 1-phosphofructokinase compare
IAI46_05695 +0.5 2.7 toxin compare
IAI46_18005 +0.5 1.5 YfcL family protein compare
IAI46_16870 +0.5 2.7 alkylhydroperoxidase domain protein compare
IAI46_09460 +0.5 1.7 phenylalanyl-tRNA synthetase subunit beta compare
IAI46_10325 +0.5 3.0 threo-3-hydroxy-L-aspartate ammonia-lyase compare
IAI46_22260 +0.5 1.7 phage holin family protein compare
IAI46_12390 +0.5 2.1 heavy metal response regulator transcription factor compare
IAI46_13115 +0.5 2.1 Zn-dependent hydrolase compare
IAI46_09895 +0.5 2.1 thiamine kinase compare
IAI46_20035 +0.5 1.5 YfiM family lipoprotein compare
IAI46_11540 +0.5 2.3 adenosine deaminase compare
IAI46_10215 +0.5 1.4 helix-turn-helix transcriptional regulator compare
IAI46_14860 +0.5 2.0 hypothetical protein compare
IAI46_13795 +0.5 1.4 stationary-phase-induced ribosome-associated protein compare
IAI46_03305 +0.5 1.7 thiamine ABC transporter ATP-binding protein ThiQ compare
IAI46_02835 +0.5 1.2 tRNA-Leu compare
IAI46_13970 +0.5 1.2 type I DNA topoisomerase compare
IAI46_23265 +0.5 1.1 peptide deformylase compare
IAI46_17130 +0.5 2.3 helix-turn-helix transcriptional regulator compare
IAI46_18810 +0.5 2.0 TOBE domain-containing protein compare
IAI46_12765 +0.5 1.7 cytochrome c compare
IAI46_11185 +0.5 1.5 pyruvate kinase PykF compare
IAI46_13055 +0.5 1.2 alpha/beta hydrolase compare
IAI46_05515 +0.5 1.2 fimbrial protein compare
IAI46_17415 +0.5 1.0 nuclear transport factor 2 family protein compare
IAI46_16295 +0.5 2.1 LysR family transcriptional regulator compare
IAI46_11140 +0.5 1.4 hypothetical protein compare
IAI46_13335 +0.5 1.6 FMN-dependent NADH-azoreductase compare
IAI46_04455 +0.5 0.9 DUF1471 domain-containing protein compare
IAI46_14750 +0.5 1.0 hypothetical protein compare
IAI46_08895 +0.5 1.5 YccF domain-containing protein compare
IAI46_14980 +0.5 2.6 oxidoreductase compare
IAI46_09485 +0.5 1.4 hypothetical protein compare
IAI46_15955 +0.5 1.3 flagellar basal body rod protein FlgC compare
IAI46_14255 +0.5 2.3 patatin-like phospholipase RssA compare
IAI46_11720 +0.5 1.9 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG compare
IAI46_12655 +0.5 0.9 LysR family transcriptional regulator compare
IAI46_02565 +0.5 2.2 hypothetical protein compare
IAI46_11865 +0.5 2.7 peptidase domain-containing ABC transporter compare
IAI46_24250 +0.4 3.9 response regulator compare
IAI46_05625 +0.4 1.4 fimbrial protein compare
IAI46_11380 +0.4 1.4 pyridoxal kinase PdxY compare
IAI46_24245 +0.4 3.0 molybdopterin-dependent oxidoreductase compare
IAI46_01910 +0.4 0.9 preprotein translocase subunit SecG compare
IAI46_02165 +0.4 1.7 colicin-D compare
IAI46_10625 +0.4 1.3 HutD family protein compare
IAI46_23500 +0.4 0.8 SlyX family protein compare
IAI46_05705 +0.4 1.1 hypothetical protein compare
IAI46_17070 +0.4 1.1 ATP-binding cassette domain-containing protein compare
IAI46_16320 +0.4 1.8 VOC family metalloprotein YjdN compare
IAI46_10640 +0.4 2.0 MFS transporter compare
IAI46_07450 +0.4 1.1 Lrp/AsnC family transcriptional regulator compare
IAI46_11160 +0.4 1.5 Fe-S cluster assembly protein SufD compare
IAI46_12130 +0.4 0.9 VOC family protein compare
IAI46_15115 +0.4 1.4 hypothetical protein compare
IAI46_02445 +0.4 1.7 hypothetical protein compare
IAI46_22840 +0.4 2.7 NCS2 family permease compare
IAI46_05540 +0.4 1.4 type VI secretion system tube protein Hcp compare
IAI46_16235 +0.4 2.0 CoA transferase compare
IAI46_05850 +0.4 2.2 GNAT family N-acetyltransferase compare
IAI46_03790 +0.4 2.9 RNA polymerase sigma factor RpoS compare
IAI46_09305 +0.4 1.9 hypothetical protein compare
IAI46_18530 +0.4 2.0 YgiW/YdeI family stress tolerance OB fold protein compare
IAI46_15105 +0.4 1.7 phage holin, lambda family compare
IAI46_11260 +0.4 1.0 Grx4 family monothiol glutaredoxin compare
IAI46_16140 +0.4 1.3 hypothetical protein compare
IAI46_14310 +0.4 1.8 tRNA 2-selenouridine(34) synthase MnmH compare
IAI46_15180 +0.4 2.4 replication protein compare
IAI46_13485 +0.4 1.1 phage shock protein PspD compare
IAI46_11255 +0.4 1.6 C40 family peptidase compare
IAI46_09995 +0.4 1.2 DNA polymerase III subunit theta compare
IAI46_15075 +0.4 1.5 terminase small subunit compare
IAI46_20190 +0.4 1.9 ribonuclease HII compare
IAI46_25120 +0.4 1.5 F0F1 ATP synthase subunit I compare
IAI46_12675 +0.4 1.8 PAS domain-containing protein compare
IAI46_20735 +0.4 2.1 flavodoxin FldB compare
IAI46_09000 +0.4 1.7 LysE family transporter compare
IAI46_00635 +0.4 2.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
IAI46_19820 +0.4 1.0 N-acetyltransferase compare
IAI46_02475 +0.4 2.3 hypothetical protein compare
IAI46_02200 +0.4 1.6 S-type pyocin domain-containing protein compare
IAI46_14170 +0.4 0.7 DUF1937 family protein compare
IAI46_09575 +0.4 0.7 hypothetical protein compare
IAI46_15610 +0.4 1.1 two-component system response regulator NarL compare
IAI46_05105 +0.4 2.3 acyl-CoA thioesterase II compare
IAI46_07595 +0.4 1.8 aldolase compare
IAI46_19735 +0.4 1.1 histidine kinase compare
IAI46_13520 +0.4 1.7 GTP cyclohydrolase I FolE2 compare
IAI46_00760 +0.4 2.4 thioesterase family protein compare
IAI46_15760 +0.4 1.8 L-cystine ABC transporter ATP-binding protein YecC compare
IAI46_04425 +0.4 1.1 sigma factor-binding protein Crl compare
IAI46_10870 +0.4 1.2 GNAT family N-acetyltransferase compare
IAI46_15285 +0.4 1.2 DUF5405 family protein compare
IAI46_09360 +0.4 1.2 Pyocin large subunit compare
IAI46_05605 +0.4 2.2 recombinase family protein compare
IAI46_24315 +0.4 0.9 4-oxalocrotonate tautomerase family protein compare
IAI46_24895 +0.4 0.6 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
IAI46_14015 +0.4 1.5 PHP domain-containing protein compare
IAI46_12610 +0.4 1.0 alpha/beta hydrolase compare
IAI46_17670 +0.4 1.0 NADH-quinone oxidoreductase subunit J compare
IAI46_14010 +0.4 1.4 threonylcarbamoyl-AMP synthase compare
IAI46_17380 +0.4 1.4 tRNA-Thr compare
IAI46_09090 +0.4 2.3 MFS transporter compare
IAI46_09885 +0.4 1.3 YcfL family protein compare
IAI46_10040 +0.4 1.8 DUF2975 domain-containing protein compare
IAI46_10410 +0.4 1.5 gluconate 2-dehydrogenase subunit 3 family protein compare
IAI46_09075 +0.4 1.1 hypothetical protein compare
IAI46_02420 +0.4 1.4 DNA cytosine methyltransferase compare
IAI46_05385 +0.4 0.5 peptidylprolyl isomerase B compare
IAI46_08785 +0.4 1.3 aliphatic sulfonate ABC transporter permease SsuC compare
IAI46_17425 +0.4 1.8 VOC family protein compare
IAI46_19005 +0.4 1.5 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
IAI46_17710 +0.4 1.0 NADH-quinone oxidoreductase subunit A compare
IAI46_05935 +0.4 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
IAI46_19080 +0.4 1.0 DNA-binding transcriptional repressor compare
IAI46_23630 +0.4 0.4 PTS lactose/cellobiose transporter subunit IIA compare
IAI46_23035 +0.4 2.3 LacI family DNA-binding transcriptional regulator compare
IAI46_15835 +0.3 0.7 flagellar hook-basal body complex protein FliE compare
IAI46_24160 +0.3 2.4 universal stress protein UspA compare
IAI46_15150 +0.3 0.9 hypothetical protein compare
IAI46_11760 +0.3 1.5 carbohydrate ABC transporter permease compare
IAI46_23450 +0.3 1.9 bacterioferritin-associated ferredoxin compare
IAI46_12035 +0.3 1.6 D,D-dipeptide ABC transporter permease compare
IAI46_15860 +0.3 1.4 flagella biosynthesis chaperone FliJ compare
IAI46_24060 +0.3 2.1 type 1 fimbrial protein compare
IAI46_20670 +0.3 0.7 Hpt domain-containing protein compare
IAI46_16070 +0.3 1.2 universal stress protein UspC compare
IAI46_08995 +0.3 1.5 NAD(P)H:quinone oxidoreductase compare
IAI46_02385 +0.3 1.0 hypothetical protein compare
IAI46_16000 +0.3 2.0 flagellar type III secretion system protein FlhB compare
IAI46_15290 +0.3 0.8 hypothetical protein compare
IAI46_15820 +0.3 1.8 aryl-sulfate sulfotransferase compare
IAI46_18590 +0.3 1.3 hypothetical protein compare
IAI46_13075 +0.3 1.6 KUP/HAK/KT family potassium transporter compare
IAI46_02050 +0.3 1.2 YhbP family protein compare
IAI46_01525 +0.3 2.3 quaternary ammonium compound efflux SMR transporter SugE compare
IAI46_10895 +0.3 1.3 type V toxin-antitoxin system endoribonuclease antitoxin GhoS compare
IAI46_13800 +0.3 1.1 hypothetical protein compare
IAI46_20120 +0.3 1.4 YaeP family protein compare
IAI46_17870 +0.3 1.5 transcriptional regulator TctD compare
IAI46_10140 +0.3 1.4 carbon-nitrogen hydrolase family protein compare
IAI46_15095 +0.3 1.4 lysozyme compare
IAI46_01285 +0.3 2.6 response regulator compare
IAI46_15005 +0.3 1.1 hypothetical protein compare
IAI46_14345 +0.3 0.8 DUF1315 family protein compare
IAI46_03895 +0.3 2.0 glutamate--cysteine ligase compare
IAI46_22495 +0.3 2.1 type II toxin-antitoxin system HigB family toxin compare
IAI46_11590 +0.3 0.9 NUDIX hydrolase compare
IAI46_06610 +0.3 1.3 secretion protein HlyD compare
IAI46_06440 +0.3 1.1 cysteine hydrolase compare
IAI46_10370 +0.3 1.9 PTS transporter subunit EIIC compare
IAI46_11475 +0.3 1.1 helix-turn-helix domain-containing protein compare
IAI46_04980 +0.3 2.6 cytochrome o ubiquinol oxidase subunit I compare
IAI46_05765 +0.3 1.2 fumarylacetoacetate hydrolase family protein compare
IAI46_17105 +0.3 1.7 amidohydrolase compare
IAI46_00625 +0.3 2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
IAI46_05335 +0.3 1.0 co-chaperone YbbN compare
IAI46_16170 +0.3 0.9 3-oxoadipate enol-lactonase compare


Specific Phenotypes

None in this experiment

For Serratia liquefaciens MT49 in stress experiments

For stress Manganese (II) chloride tetrahydrate across organisms