Experiment set1IT064 for Agrobacterium fabrum C58

Compare to:

D-Mannitol carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -9.3 -6.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -8.3 -5.7 3-isopropylmalate dehydrogenase compare
Atu4451 -8.2 -11.3 mannitol 2-dehydrogenase conserved
Atu0038 -7.6 -6.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2289 -7.5 -15.3 anthranilate synthase component I and II compare
Atu2709 -7.5 -15.2 3-isopropylmalate dehydratase, large subunit compare
Atu2040 -7.4 -5.1 phosphoserine phosphatase compare
Atu0432 -7.3 -11.1 O-succinylhomoserine sulfhydrylase compare
Atu1687 -7.2 -11.1 anthranilate phosphoribosyltransferase compare
Atu1588 -7.2 -9.9 homoserine dehydrogenase compare
Atu2264 -7.1 -12.8 2-isopropylmalate synthase compare
Atu1141 -7.0 -8.4 Phosphoribosylglycinamide synthetase compare
Atu2726 -7.0 -20.4 pyruvate carboxylase compare
Atu0099 -7.0 -12.6 prephenate dehydratase compare
Atu0486 -6.9 -6.7 dihydroorotate dehydrogenase compare
Atu3885 -6.9 -9.4 inositol monophosphatase compare
Atu3706 -6.7 -9.2 D-3-phosphoglycerate dehydrogenase compare
Atu3707 -6.7 -4.6 phosphoserine aminotransferase compare
Atu1688 -6.7 -6.5 indole-3-glycerol-phosphate synthase compare
Atu1075 -6.7 -7.9 amidophosphoribosyltransferase compare
Atu1205 -6.6 -15.5 threonine dehydratase compare
Atu1307 -6.6 -7.9 dihydroorotase compare
Atu1140 -6.6 -6.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2036 -6.5 -16.9 acetolactate synthase III, large subunit compare
Atu0401 -6.5 -7.2 fructokinase compare
Atu3482 -6.5 -12.4 pantoate--beta-alanine ligase compare
Atu0537 -6.4 -7.6 histidinol dehydrogenase compare
Atu0298 -6.4 -6.2 orotidine 5 compare
Atu0678 -6.3 -8.6 histidyl-tRNA synthetase compare
Atu0679 -6.3 -7.5 ATP phosphoribosyltransferase compare
Atu0422 -6.2 -4.0 ABC transporter, membrane spanning protein compare
Atu1308 -6.2 -7.4 aspartate carbamoyl transferase catalytic subunit compare
Atu1850 -6.1 -5.6 phosphoribosylformylglycinamidine synthetase II compare
Atu0017 -6.1 -4.2 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2718 -6.0 -10.8 homoserine O-succinyltransferase compare
Atu0647 -6.0 -4.2 phosphoribosylamine--glycine ligase compare
Atu0030 -6.0 -2.3 phosphocarrier protein HPr compare
Atu0400 -6.0 -5.8 orotate phosphoribosyltransferase compare
Atu3739 -5.9 -3.0 phosphoglycerate kinase compare
Atu3754 -5.9 -8.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0043 -5.8 -4.0 imidazoleglycerol-phosphate dehydratase compare
Atu0039 -5.6 -3.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu3483 -5.6 -5.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1845 -5.5 -6.0 phosphoribosylformylglycinamidine synthase I compare
Atu3469 -5.4 -3.7 phosphoglyceromutase compare
Atu1030 -5.4 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2747 -5.3 -14.3 hypothetical protein compare
Atu2015 -5.3 -17.3 aminotransferase compare
Atu2790 -5.3 -2.7 3-isopropylmalate dehydratase, small subunit compare
Atu3755 -5.2 -7.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0399 -5.2 -8.0 dihydroorotase compare
Atu1844 -5.1 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu1359 -5.0 -1.9 dnaK deletion suppressor protein compare
Atu1686 -4.9 -19.3 peptidyl-prolyl cis-trans isomerse D compare
Atu2548 -4.9 -22.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4450 -4.8 -11.9 sugar ABC transporter ATPase compare
Atu4447 -4.8 -19.0 sorbitol ABC transporter substrate-binding protein conserved
Atu0421 -4.7 -2.5 ABC transporter, membrane spanning protein compare
Atu2125 -4.6 -3.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1464 -4.6 -8.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu0641 -4.5 -4.6 hypothetical protein compare
Atu4449 -4.4 -8.0 sorbitol/mannitol ABC transporter permease conserved
Atu2650 -4.4 -15.6 glycerol-3-phosphate dehydrogenase compare
Atu0602 -4.3 -17.3 glutamine synthetase compare
Atu3784 -4.3 -29.2 glutamate synthase large subunit compare
Atu1462 -4.2 -17.4 glycine cleavage system protein P2 compare
Atu0659 -4.2 -8.0 NTP pyrophosphohydrolase, MutT family compare
Atu4448 -4.1 -9.4 sorbitol/mannitol ABC transporter permease compare
Atu1463 -4.1 -6.7 glycine cleavage system component H compare
Atu3731 -4.0 -12.3 5-formyltetrahydrofolate cyclo-ligase compare
Atu3783 -3.9 -17.9 glutamate synthase subunit beta compare
Atu0040 -3.9 -2.1 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0999 -3.8 -12.0 magnesium transport protein compare
Atu1589 -3.8 -7.7 aminotransferase, class I compare
Atu0598 -3.7 -10.0 phosphogluconate dehydratase compare
Atu4096 -3.7 -13.1 nicotinate-nucleotide pyrophosphorylase compare
Atu0601 -3.6 -12.9 oxidoreductase compare
Atu1446 -3.4 -3.9 two component response regulator compare
Atu4098 -3.4 -11.7 quinolinate synthetase compare
Atu1604 -3.3 -20.4 poly-beta-hydroxybutyrate synthase compare
Atu2155 -3.1 -19.7 methionine synthase compare
Atu6114 -3.0 -3.6 hypothetical protein compare
Atu4097 -2.9 -13.4 L-aspartate oxidase compare
Atu4075 -2.9 -9.5 glycogen synthase compare
Atu3997 -2.7 -16.4 biotin synthetase compare
Atu1021 -2.7 -3.3 outer membrane protein compare
Atu1456 -2.6 -10.6 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2127 -2.6 -10.9 L-carnitine dehydratase compare
Atu1620 -2.6 -14.3 triosephosphate isomerase compare
Atu2205 -2.4 -6.4 transcriptional regulator, MarR family compare
Atu2569 -2.4 -15.2 thiamine biosynthesis protein compare
Atu1748 -2.4 -7.7 NIFU-like protein compare
Atu4000 -2.3 -15.5 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0876 -2.3 -3.0 superoxide dismutase compare
Atu4173 -2.3 -4.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu1685 -2.3 -1.9 hypothetical protein compare
Atu1454 -2.2 -7.4 siroheme synthase compare
Atu4001 -2.2 -11.3 3-oxoacyl-ACP synthase compare
Atu0434 -2.2 -4.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3998 -2.2 -9.5 8-amino-7-oxononanoate synthase compare
Atu0029 -2.1 -6.1 S-adenosylhomocysteine hydrolase compare
Atu2832 -2.1 -5.0 tRNA modification GTPase compare
Atu3288 -2.1 -7.4 hydroxyethylthiazole kinase compare
Atu3999 -2.0 -3.0 dithiobiotin synthetase compare
Atu2770 -2.0 -9.0 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu3290 -2.0 -11.9 phosphomethylpyrimidine kinase compare
Atu3730 -1.9 -2.0 hypothetical protein compare
Atu0332 -1.9 -9.8 RNA polymerase sigma-54 factor compare
Atu4346 -1.7 -5.8 hypothetical protein compare
Atu0941 -1.7 -1.5 hypothetical protein compare
Atu8115 -1.7 -3.7 Hypothetical Protein compare
Atu4453 -1.7 -11.9 ribitol kinase conserved
Atu3289 -1.7 -5.8 thiamine-phosphate pyrophosphorylase compare
Atu0769 -1.7 -2.6 protoheme IX farnesyltransferase compare
Atu6165 -1.7 -1.2 hypothetical protein compare
Atu2684 -1.6 -2.5 hypothetical protein compare
Atu0977 -1.5 -2.6 serine protease DO-like protease compare
Atu2831 -1.5 -5.3 glucose inhibited division protein A compare
Atu2554 -1.4 -2.5 lysyl-tRNA synthetase compare
Atu0723 -1.3 -2.4 FAD dependent oxidoreductase compare
Atu3750 -1.3 -3.1 thiamine-phosphate pyrophosphorylase compare
Atu6189 -1.3 -1.1 protein secretion chaperone compare
Atu0388 -1.3 -8.0 two component sensor kinase compare
Atu0354 -1.3 -3.0 ferric uptake regulator compare
Atu2123 -1.3 -5.4 methylenetetrahydrofolate reductase compare
Atu0533 -1.3 -1.3 putative inhibitor of septum formation compare
Atu5164 -1.3 -0.9 type IV secretion protein AvhB3 compare
Atu2207 -1.3 -3.3 two component sensor kinase compare
Atu4711 -1.3 -6.3 two component sensor kinase compare
Atu2209 -1.3 -4.2 pyrroline-5-carboxylate reductase compare
Atu2045 -1.3 -7.4 HFLK protein compare
Atu3910 -1.3 -5.6 LamB/YcsF family protein compare
Atu1455 -1.2 -2.7 hypothetical protein compare
Atu2020 -1.2 -2.3 transcriptional regulator, TetR family compare
Atu0368 -1.2 -4.2 tRNA pseudouridine synthase I compare
Atu0658 -1.2 -7.6 phosphate permease compare
Atu1445 -1.2 -4.1 two component sensor kinase compare
Atu5430 -1.2 -1.1 hypothetical protein compare
Atu4773 -1.2 -2.3 two component response regulator compare
Atu2803 -1.2 -5.1 Cobalamin biosynthesis associated protein compare
Atu1439 -1.2 -2.8 hypothetical protein compare
Atu0981 -1.2 -7.8 glutamate-ammonia-ligase adenylyltransferase compare
Atu2808 -1.2 -6.3 cobyric acid synthase compare
Atu0792 -1.2 -3.5 hypothetical protein compare
Atu4317 -1.1 -3.6 TetR family transcriptional regulator compare
Atu0184 -1.1 -2.9 glucokinase compare
Atu2044 -1.1 -4.6 HFLC protein compare
Atu0188 -1.1 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu2800 -1.1 -3.1 precorrin-3B C17-methyltransferase compare
Atu2433 -1.1 -1.7 hypothetical protein compare
Atu4176 -1.0 -4.1 hypothetical protein compare
Atu6098 -1.0 -0.6 transcriptional regulator, HTH family compare
Atu1774 -1.0 -5.5 ABC transporter, substrate binding protein (peptide) compare
Atu4541 -1.0 -3.6 carboxymuconolactone decarboxylase compare
Atu0346 -1.0 -2.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3468 -1.0 -1.1 hypothetical protein compare
Atu2682 -1.0 -3.7 hypothetical protein compare
Atu2793 -1.0 -4.1 cobyrinic acid a,c-diamide synthase compare
Atu2796 -1.0 -5.0 precorrin-4 C11-methyltransferase compare
Atu2692 -1.0 -3.1 intracellular septation protein compare
Atu2804 -0.9 -6.8 cobaltochelatase subunit compare
Atu4616 -0.9 -1.5 dTDP-4-dehydrorhamnose reductase compare
Atu0912 -0.9 -1.0 Na+/H+ antiporter compare
Atu1285 -0.9 -4.5 metal dependent hydrolase compare
Atu0190 -0.9 -4.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2809 -0.9 -4.2 cobalamin biosynthesis protein compare
Atu2807 -0.9 -4.4 cob(I)alamin adenosyltransferase compare
Atu1217 -0.9 -4.0 cysteine synthase compare
Atu2442 -0.9 -2.0 hypothetical protein compare
Atu0189 -0.9 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu5451 -0.9 -0.8 hypothetical protein compare
Atu8087 -0.9 -1.3 putative peptidoglycan binding protein compare
Atu1546 -0.9 -4.2 transcriptional regulator, MerR family compare
Atu3886 -0.8 -4.7 lysophospholipase compare
Atu8131 -0.8 -6.2 pH adaption potassium efflux system protein compare
Atu1457 -0.8 -0.9 hypothetical protein compare
Atu3461 -0.8 -2.4 GntR family transcriptional regulator compare
Atu2239 -0.8 -2.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4635 -0.8 -3.7 hypothetical protein compare
Atu1770 -0.8 -5.5 glutamine synthetase compare
Atu3908 -0.8 -5.6 GntR family transcriptional regulator compare
Atu5125 -0.8 -2.7 GntR family transcriptional regulator compare
Atu2464 -0.8 -2.8 formyltetrahydrofolate deformylase compare
Atu3336 -0.8 -2.2 hypothetical protein compare
Atu0510 -0.8 -5.1 pH adaption potassium efflux system protein compare
Atu2799 -0.8 -3.3 precorrin-6x reductase compare
Atu4391 -0.8 -1.0 nitric oxide reductase NorE protein compare
Atu2801 -0.8 -3.0 precorrin-2 C20 methyltransferase compare
Atu2805 -0.8 -3.9 cobalamin synthesis protein compare
Atu0946 -0.8 -4.2 dehydrogenase compare
Atu1810 -0.8 -0.7 hypothetical protein compare
Atu2245 -0.8 -5.2 Na+/Pi-cotransporter compare
Atu2802 -0.7 -5.0 precorrin-8X methylmutase compare
Atu2798 -0.7 -1.9 precorrin-6y methyltransferase compare
Atu1693 -0.7 -5.8 glutathione-regulated potassium-efflux system protein compare
Atu1242 -0.7 -4.2 cytochrome oxidase assembly factor compare
Atu0786 -0.7 -2.6 peptidase, family M16 compare
Atu0836 -0.7 -2.0 Glutathione-S-transferase compare
Atu2746 -0.7 -2.4 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Mannitol in Agrobacterium fabrum C58

For carbon source D-Mannitol across organisms