Experiment set1IT063 for Magnetospirillum magneticum AMB-1

Compare to:

150_nonmag_1

200 most important genes:

  gene name fitness t score description  
AMB_RS21290 -3.0 -2.9 DUF4139 domain-containing protein compare
AMB_RS04280 -2.8 -18.3 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS14035 -2.4 -6.8 endopeptidase La compare
AMB_RS07010 -2.3 -9.5 ATP-dependent helicase compare
AMB_RS16025 -2.1 -6.3 MFS transporter compare
AMB_RS00355 -2.0 -9.8 radical SAM protein compare
AMB_RS19545 -1.9 -4.4 elongation factor 4 compare
AMB_RS14175 -1.9 -1.6 COQ9 family protein compare
AMB_RS22565 -1.8 -13.3 MucR family transcriptional regulator compare
AMB_RS15295 -1.8 -2.8 iron donor protein CyaY compare
AMB_RS03835 -1.7 -2.4 YicC family protein compare
AMB_RS21385 -1.5 -5.7 helix-turn-helix transcriptional regulator compare
AMB_RS20740 -1.4 -9.6 hypothetical protein compare
AMB_RS19880 -1.4 -2.5 site-specific tyrosine recombinase XerD compare
AMB_RS19790 -1.4 -2.9 NAD(P)-dependent oxidoreductase compare
AMB_RS00010 -1.4 -2.0 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS00800 -1.3 -6.6 nucleoside-diphosphate-sugar pyrophosphorylase compare
AMB_RS20020 -1.3 -2.5 cell division protein ZapE compare
AMB_RS03045 -1.3 -0.6 hydrogen peroxide-inducible genes activator compare
AMB_RS22235 -1.3 -3.1 RNase adaptor protein RapZ compare
AMB_RS02025 -1.3 -1.6 hypothetical protein compare
AMB_RS23090 -1.3 -4.5 NAD(P)-dependent oxidoreductase compare
AMB_RS22315 -1.3 -5.9 membrane protein compare
AMB_RS22280 -1.2 -7.9 hypothetical protein compare
AMB_RS14430 -1.2 -3.0 LexA repressor compare
AMB_RS03205 -1.2 -2.7 DNA recombination/repair protein RecA compare
AMB_RS17585 -1.1 -6.6 type I secretion system ATPase compare
AMB_RS07415 -1.1 -1.0 DUF2946 domain-containing protein compare
AMB_RS07115 -1.1 -3.2 Lrp/AsnC family transcriptional regulator compare
AMB_RS24000 -1.1 -1.4 glycosyltransferase family 1 protein compare
AMB_RS04510 -1.1 -4.4 ferrous iron transporter compare
AMB_RS04360 -1.1 -2.2 thiosulfate oxidation carrier protein SoxY compare
AMB_RS15550 -1.1 -4.8 copper chaperone PCu(A)C compare
AMB_RS15410 -1.1 -6.1 outer membrane protein compare
AMB_RS00820 -1.1 -2.8 GDP-L-fucose synthase compare
AMB_RS00795 -1.1 -7.8 LPS biosynthesis protein compare
AMB_RS12290 -1.1 -4.1 MBL fold metallo-hydrolase compare
AMB_RS11305 -1.1 -8.1 CHAT domain-containing protein compare
AMB_RS22490 -1.0 -2.0 YdcF family protein compare
AMB_RS21430 -1.0 -0.9 hypothetical protein compare
AMB_RS20350 -1.0 -3.9 aspartate 1-decarboxylase compare
AMB_RS17765 -1.0 -2.6 2-isopropylmalate synthase compare
AMB_RS11195 -1.0 -1.0 sulfate adenylyltransferase subunit 2 compare
AMB_RS01185 -1.0 -6.4 HD domain-containing protein compare
AMB_RS21435 -1.0 -8.9 methylmalonyl-CoA mutase compare
AMB_RS10210 -1.0 -6.3 xanthine and CO dehydrogenase maturation factor compare
AMB_RS17450 -1.0 -2.0 DUF1987 domain-containing protein compare
AMB_RS13400 -1.0 -4.2 formylglycine-generating enzyme family protein compare
AMB_RS02180 -1.0 -0.9 double-strand break repair protein AddB compare
AMB_RS06665 -1.0 -3.1 LrgB family protein compare
AMB_RS11295 -1.0 -3.6 hypothetical protein compare
AMB_RS00805 -1.0 -7.3 haloacid dehalogenase compare
AMB_RS04245 -1.0 -6.3 (R)-hydratase compare
AMB_RS05505 -1.0 -4.1 GDP-mannose 4,6-dehydratase compare
AMB_RS12320 -0.9 -2.0 septal ring lytic transglycosylase RlpA family protein compare
AMB_RS00810 -0.9 -4.1 hypothetical protein compare
AMB_RS00815 -0.9 -6.1 hypothetical protein compare
AMB_RS08255 -0.9 -1.9 hypothetical protein compare
AMB_RS07240 -0.9 -5.7 PAS domain-containing sensor histidine kinase compare
AMB_RS19565 -0.9 -4.3 peptidase M23 compare
AMB_RS10195 -0.9 -5.3 4-hydroxybenzoyl-CoA reductase subunit gamma compare
AMB_RS17455 -0.9 -5.3 histidine kinase compare
AMB_RS00480 -0.9 -5.6 methyltransferase domain-containing protein compare
AMB_RS12395 -0.9 -1.2 succinate dehydrogenase assembly factor 2 compare
AMB_RS01605 -0.9 -2.0 aspartate aminotransferase family protein compare
AMB_RS05075 -0.9 -1.0 transcriptional regulator compare
AMB_RS10475 -0.9 -1.6 transcriptional regulator NrdR compare
AMB_RS24445 -0.9 -3.1 hypothetical protein compare
AMB_RS12615 -0.9 -1.8 phytoene/squalene synthetase compare
AMB_RS17310 -0.9 -8.4 tandem-95 repeat protein compare
AMB_RS14025 -0.8 -1.3 tRNA-Val compare
AMB_RS23935 -0.8 -2.6 hypothetical protein compare
AMB_RS23950 -0.8 -3.1 hemerythrin compare
AMB_RS03920 -0.8 -2.0 hypothetical protein compare
AMB_RS09095 -0.8 -2.9 hypothetical protein compare
AMB_RS22085 -0.8 -8.1 cytochrome c oxidase accessory protein CcoG compare
AMB_RS05435 -0.8 -1.9 ABC transporter permease compare
AMB_RS01640 -0.8 -5.5 response regulator compare
AMB_RS19750 -0.8 -4.5 3-hydroxybutyryl-CoA dehydrogenase compare
AMB_RS03725 -0.8 -3.5 DNA helicase II compare
AMB_RS22325 -0.8 -2.9 4Fe-4S binding domain-containing protein compare
AMB_RS22285 -0.8 -5.2 sulfite exporter TauE/SafE family protein compare
AMB_RS11300 -0.8 -5.2 adenylate/guanylate cyclase domain-containing protein compare
AMB_RS10120 -0.8 -1.8 DUF1476 domain-containing protein compare
AMB_RS03610 -0.8 -4.2 transcription elongation factor GreA compare
AMB_RS15620 -0.8 -3.8 RluA family pseudouridine synthase compare
AMB_RS14290 -0.8 -3.3 exopolyphosphatase compare
AMB_RS17445 -0.8 -2.7 hypothetical protein compare
AMB_RS00855 -0.8 -3.9 helix-turn-helix domain-containing protein compare
AMB_RS00245 -0.8 -2.1 transcriptional activator RfaH compare
AMB_RS22150 -0.7 -1.1 MarR family transcriptional regulator compare
AMB_RS12825 -0.7 -2.1 phosphatidylglycerophosphatase A compare
AMB_RS23095 -0.7 -3.8 class I SAM-dependent methyltransferase compare
AMB_RS10205 -0.7 -5.4 4-hydroxybenzoyl-CoA reductase subunit beta compare
AMB_RS06660 -0.7 -2.3 hypothetical protein compare
AMB_RS20595 -0.7 -2.3 ribosome maturation factor compare
AMB_RS00695 -0.7 -2.6 gfo/Idh/MocA family oxidoreductase compare
AMB_RS02660 -0.7 -2.1 SCO family protein compare
AMB_RS01995 -0.7 -1.7 DUF1833 domain-containing protein compare
AMB_RS23210 -0.7 -4.5 glycosyl transferase compare
AMB_RS01305 -0.7 -4.3 protocatechuate 4,5-dioxygenase subunit alpha compare
AMB_RS17735 -0.7 -4.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
AMB_RS05175 -0.7 -1.8 transcriptional repressor compare
AMB_RS10750 -0.7 -3.7 RNA methyltransferase compare
AMB_RS23955 -0.7 -3.1 hypothetical protein compare
AMB_RS07110 -0.7 -1.1 Lrp/AsnC family transcriptional regulator compare
AMB_RS05085 -0.7 -1.6 hemerythrin compare
AMB_RS20145 -0.7 -2.1 chromosome segregation ATPase compare
AMB_RS08580 -0.7 -1.6 hypothetical protein compare
AMB_RS02045 -0.7 -3.4 hypothetical protein compare
AMB_RS18595 -0.7 -2.6 leucyl aminopeptidase compare
AMB_RS02650 -0.7 -2.8 uroporphyrinogen-III C-methyltransferase compare
AMB_RS11780 -0.7 -1.9 glutamate synthase subunit beta compare
AMB_RS12855 -0.7 -1.6 hypothetical protein compare
AMB_RS21705 -0.7 -3.3 site-specific integrase compare
AMB_RS12785 -0.7 -2.0 murein transglycosylase compare
AMB_RS24510 -0.7 -2.9 hypothetical protein compare
AMB_RS14565 -0.7 -2.0 sensor histidine kinase compare
AMB_RS03265 -0.7 -3.7 enoyl-CoA hydratase compare
AMB_RS10200 -0.7 -3.9 4-hydroxybenzoyl-CoA reductase subunit alpha compare
AMB_RS09570 -0.7 -1.4 baseplate assembly protein compare
AMB_RS18145 -0.7 -2.9 GntR family transcriptional regulator compare
AMB_RS21310 -0.7 -1.0 zinc-finger domain-containing protein compare
AMB_RS21025 -0.6 -4.2 DUF3422 domain-containing protein compare
AMB_RS13915 -0.6 -4.3 DNA-binding response regulator compare
AMB_RS20120 -0.6 -1.7 VOC family protein compare
AMB_RS17335 -0.6 -1.0 N-acyl-L-homoserine lactone synthetase compare
AMB_RS05500 -0.6 -2.8 GDP-mannose 4,6 dehydratase compare
AMB_RS15930 -0.6 -1.8 hypothetical protein compare
AMB_RS23065 -0.6 -2.1 hypothetical protein compare
AMB_RS04325 -0.6 -3.1 TetR/AcrR family transcriptional regulator compare
AMB_RS17590 -0.6 -3.5 HlyD family type I secretion periplasmic adaptor subunit compare
AMB_RS21455 -0.6 -2.6 XRE family transcriptional regulator compare
AMB_RS22570 -0.6 -1.7 transcriptional repressor compare
AMB_RS08265 -0.6 -1.3 hypothetical protein compare
AMB_RS14525 -0.6 -0.6 xylanase/chitin deacetylase compare
AMB_RS11540 -0.6 -3.5 PAS domain-containing sensor histidine kinase compare
AMB_RS21710 -0.6 -1.7 hypothetical protein compare
AMB_RS10700 -0.6 -3.0 hypothetical protein compare
AMB_RS13830 -0.6 -1.0 DUF1127 domain-containing protein compare
AMB_RS05095 -0.6 -3.0 hemerythrin compare
AMB_RS09845 -0.6 -1.5 hypothetical protein compare
AMB_RS04575 -0.6 -0.8 DNA-binding response regulator compare
AMB_RS06755 -0.6 -1.5 hypothetical protein compare
AMB_RS18330 -0.6 -3.3 glycosyl transferase family protein compare
AMB_RS01480 -0.6 -2.0 M48 family peptidase compare
AMB_RS21125 -0.6 -2.1 YciI family protein compare
AMB_RS06435 -0.6 -1.7 glycosyltransferase compare
AMB_RS17570 -0.6 -2.3 DUF2336 domain-containing protein compare
AMB_RS20805 -0.6 -1.6 isoprenoid biosynthesis protein ElbB compare
AMB_RS05835 -0.6 -1.9 hypothetical protein compare
AMB_RS11185 -0.6 -4.6 nitrite/sulfite reductase compare
AMB_RS05405 -0.6 -0.9 4Fe-4S dicluster domain-containing protein compare
AMB_RS17850 -0.6 -1.0 nuclease compare
AMB_RS21070 -0.6 -2.8 TetR family transcriptional regulator compare
AMB_RS17985 -0.6 -4.1 sulfite exporter TauE/SafE family protein compare
AMB_RS05910 -0.6 -1.0 hypothetical protein compare
AMB_RS00240 -0.6 -1.2 hypothetical protein compare
AMB_RS10720 -0.6 -1.5 hypothetical protein compare
AMB_RS10555 -0.6 -1.8 DNA repair protein RadA compare
AMB_RS03510 -0.5 -2.9 flagellin-like protein compare
AMB_RS00745 -0.5 -2.2 MFS transporter compare
AMB_RS20770 -0.5 -1.8 TrkH family potassium uptake protein compare
AMB_RS00715 -0.5 -3.3 glycosyltransferase family 2 protein compare
AMB_RS24670 -0.5 -2.9 DUF2813 domain-containing protein compare
AMB_RS11775 -0.5 -4.9 glutamate synthase large subunit compare
AMB_RS13575 -0.5 -2.5 hypothetical protein compare
AMB_RS16080 -0.5 -1.1 tRNA-Glu compare
AMB_RS12410 -0.5 -3.4 excinuclease ABC subunit UvrA compare
AMB_RS00180 -0.5 -2.5 hypothetical protein compare
AMB_RS03405 -0.5 -0.5 LysR family transcriptional regulator compare
AMB_RS09495 -0.5 -2.3 hypothetical protein compare
AMB_RS08270 -0.5 -2.4 hypothetical protein compare
AMB_RS22965 -0.5 -1.9 XRE family transcriptional regulator compare
AMB_RS10945 -0.5 -1.5 diguanylate phosphodiesterase compare
AMB_RS18015 -0.5 -2.2 ABC transporter ATP-binding protein compare
AMB_RS24280 -0.5 -3.0 sel1 repeat family protein compare
AMB_RS23070 -0.5 -1.4 ferredoxin compare
AMB_RS01770 -0.5 -1.4 XRE family transcriptional regulator compare
AMB_RS17905 -0.5 -2.3 ATP-binding protein compare
AMB_RS01190 -0.5 -2.2 UbiD family decarboxylase compare
AMB_RS07865 -0.5 -2.6 ATP-dependent chaperone ClpB compare
AMB_RS10265 -0.5 -1.6 hypothetical protein compare
AMB_RS23890 -0.5 -1.7 hypothetical protein compare
AMB_RS04740 -0.5 -2.3 hypothetical protein compare
AMB_RS01310 -0.5 -2.3 protocatechuate 3,4-dioxygenase subunit beta compare
AMB_RS11640 -0.5 -1.1 UbiX family flavin prenyltransferase compare
AMB_RS24460 -0.5 -1.4 hypothetical protein compare
AMB_RS22265 -0.5 -2.5 hypothetical protein compare
AMB_RS10580 -0.5 -1.6 hypothetical protein compare
AMB_RS20190 -0.5 -2.2 ribonuclease HII compare
AMB_RS07645 -0.5 -1.2 hypothetical protein compare
AMB_RS02705 -0.5 -1.9 ribbon-helix-helix protein, CopG family compare
AMB_RS08650 -0.5 -2.0 PIN domain nuclease compare
AMB_RS23015 -0.5 -1.2 septum formation protein Maf compare
AMB_RS14505 -0.5 -1.5 carbon monoxide dehydrogenase compare
AMB_RS15540 -0.5 -1.8 SCO family protein compare
AMB_RS22575 -0.5 -3.3 GNAT family N-acetyltransferase compare
AMB_RS24645 -0.5 -1.5 DUF423 domain-containing protein compare
AMB_RS19405 -0.5 -1.0 DUF1491 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For magnetic pulldown Iron in Magnetospirillum magneticum AMB-1

For magnetic pulldown Iron across organisms