Experiment set1IT061 for Rhizobium sp. OAE497

Compare to:

L-Asparagine carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18590 -6.7 -6.6 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.7 -6.5 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS00245 -6.5 -7.7 prephenate dehydratase compare
ABIE40_RS11950 -6.5 -4.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS19050 -6.3 -7.5 3-isopropylmalate dehydrogenase compare
ABIE40_RS18380 -6.2 -10.3 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS17525 -6.1 -3.6 lipoprotein compare
ABIE40_RS13330 -5.9 -7.1 2-isopropylmalate synthase compare
ABIE40_RS09095 -5.7 -4.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.6 -3.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS18920 -5.6 -6.7 glutamate 5-kinase compare
ABIE40_RS18775 -5.5 -14.3 pyruvate carboxylase compare
ABIE40_RS19355 -5.5 -5.0 thioredoxin compare
ABIE40_RS09545 -5.5 -3.7 anthranilate phosphoribosyltransferase compare
ABIE40_RS19040 -5.4 -7.4 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS17530 -5.3 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS16320 -5.2 -3.6 histidinol-phosphatase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS03660 -5.1 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS11150 -5.1 -6.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS20460 -5.0 -3.5 precorrin-3B synthase compare
ABIE40_RS02725 -5.0 -4.9 histidinol dehydrogenase compare
ABIE40_RS09090 -5.0 -3.5 nitrogen regulation protein NR(I) compare
ABIE40_RS19435 -5.0 -2.9 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10720 -4.9 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS11105 -4.8 -3.3 cobyrinate a,c-diamide synthase compare
ABIE40_RS19460 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS09725 -4.8 -3.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS06930 -4.7 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS10180 -4.7 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS10725 -4.6 -4.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS09360 -4.6 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS11165 -4.5 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS16070 -4.4 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS11175 -4.4 -5.2 cobyric acid synthase compare
ABIE40_RS18925 -4.4 -5.2 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS13410 -4.4 -4.3 anthranilate synthase compare
ABIE40_RS19440 -4.4 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS06270 -4.3 -7.2 amidophosphoribosyltransferase compare
ABIE40_RS01930 -4.3 -2.5 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS08635 -4.3 -12.7 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS17650 -4.3 -4.2 cobaltochelatase subunit CobS compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.3 -2.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS18055 -4.2 -2.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS11155 -4.2 -4.1 cobaltochelatase subunit CobN compare
ABIE40_RS06560 -4.2 -4.9 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS02320 -4.1 -4.0 aspartate aminotransferase family protein compare
ABIE40_RS20455 -4.1 -2.4 precorrin-8X methylmutase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS20430 -4.0 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS00595 -4.0 -9.6 glucokinase compare
ABIE40_RS03405 -4.0 -2.7 anti-sigma factor compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS19330 -3.9 -4.7 phosphoribosylanthranilate isomerase compare
ABIE40_RS11095 -3.9 -3.8 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS12135 -3.8 -2.7 methionine synthase compare
ABIE40_RS19445 -3.8 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS17645 -3.8 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS22700 -3.8 -14.2 ABC transporter substrate-binding protein compare
ABIE40_RS22720 -3.7 -12.7 aldo/keto reductase compare
ABIE40_RS20450 -3.7 -4.2 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS22695 -3.6 -11.0 helix-turn-helix domain-containing protein compare
ABIE40_RS05430 -3.5 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS09150 -3.5 -17.3 nitrite/sulfite reductase compare
ABIE40_RS01730 -3.5 -2.7 NifU family protein compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10155 -3.4 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS15920 -3.4 -1.2 50S ribosomal protein L31 compare
ABIE40_RS14990 -3.3 -11.0 glycosyltransferase family 2 protein compare
ABIE40_RS22705 -3.2 -7.8 sugar ABC transporter permease compare
ABIE40_RS18880 -3.2 -13.1 UDP-glucose 4-epimerase GalE compare
ABIE40_RS10345 -3.2 -6.3 RNA polymerase-binding protein DksA compare
ABIE40_RS04475 -3.2 -11.8 phosphoadenylyl-sulfate reductase compare
ABIE40_RS09155 -3.2 -6.9 DUF934 domain-containing protein compare
ABIE40_RS20445 -3.1 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS12925 -3.0 -11.5 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS06050 -3.0 -6.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS14955 -3.0 -9.0 sugar transferase compare
ABIE40_RS09140 -2.9 -10.2 siroheme synthase CysG compare
ABIE40_RS00725 -2.8 -5.0 DNA cytosine methyltransferase compare
ABIE40_RS10390 -2.8 -2.5 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS14980 -2.7 -4.9 glycoside hydrolase family 16 protein compare
ABIE40_RS22710 -2.7 -6.9 carbohydrate ABC transporter permease compare
ABIE40_RS06730 -2.7 -4.4 riboflavin synthase compare
ABIE40_RS09660 -2.7 -11.4 AI-2E family transporter compare
ABIE40_RS00580 -2.7 -2.6 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS04465 -2.6 -14.0 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS16210 -2.6 -7.6 homospermidine synthase compare
ABIE40_RS12360 -2.6 -12.3 DUF5131 family protein compare
ABIE40_RS04470 -2.6 -11.9 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS01765 -2.6 -5.0 [protein-PII] uridylyltransferase compare
ABIE40_RS06725 -2.6 -5.6 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS22715 -2.5 -7.7 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
ABIE40_RS04115 -2.5 -2.0 ribonuclease HI compare
ABIE40_RS16655 -2.4 -6.9 creatininase family protein compare
ABIE40_RS19480 -2.4 -3.2 DUF1402 family protein compare
ABIE40_RS10985 -2.4 -11.9 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS08425 -2.4 -3.4 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS09720 -2.2 -4.3 GTP cyclohydrolase I FolE compare
ABIE40_RS19360 -2.2 -4.5 double-strand break repair helicase AddA compare
ABIE40_RS18735 -2.2 -7.3 TetR/AcrR family transcriptional regulator compare
ABIE40_RS28420 -2.1 -2.0 30S ribosomal protein S21 compare
ABIE40_RS05660 -2.1 -3.2 response regulator transcription factor compare
ABIE40_RS10990 -2.1 -11.0 sugar phosphate isomerase/epimerase compare
ABIE40_RS06265 -2.1 -2.3 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS06145 -2.1 -6.2 folate-binding protein YgfZ compare
ABIE40_RS06720 -2.1 -2.1 transcriptional regulator NrdR compare
ABIE40_RS03190 -2.0 -4.9 phosphogluconate dehydratase compare
ABIE40_RS05685 -2.0 -10.1 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS22300 -2.0 -4.4 superoxide dismutase compare
ABIE40_RS27160 -1.9 -1.1 low affinity iron permease family protein compare
ABIE40_RS09980 -1.9 -1.9 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS04070 -1.9 -4.0 heme o synthase compare
ABIE40_RS14785 -1.9 -4.2 hypothetical protein compare
ABIE40_RS19375 -1.8 -4.3 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS09540 -1.8 -4.8 peptidylprolyl isomerase compare
ABIE40_RS08935 -1.8 -2.3 RIP metalloprotease RseP compare
ABIE40_RS26670 -1.8 -1.1 hypothetical protein compare
ABIE40_RS00960 -1.8 -3.3 formyltetrahydrofolate deformylase compare
ABIE40_RS22725 -1.8 -5.9 anti-sigma factor compare
ABIE40_RS14985 -1.8 -1.7 glycosyltransferase compare
ABIE40_RS10200 -1.8 -1.9 Grx4 family monothiol glutaredoxin compare
ABIE40_RS09145 -1.8 -3.9 DUF2849 domain-containing protein compare
ABIE40_RS00935 -1.8 -5.9 ABC transporter substrate-binding protein compare
ABIE40_RS17170 -1.8 -12.3 glycoside hydrolase family 2 protein compare
ABIE40_RS19365 -1.7 -3.2 double-strand break repair protein AddB compare
ABIE40_RS23000 -1.7 -3.7 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11960 -1.7 -2.2 energy-dependent translational throttle protein EttA compare
ABIE40_RS05670 -1.7 -4.5 membrane protein compare
ABIE40_RS06440 -1.7 -4.0 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS05690 -1.7 -4.7 cytochrome c-type biogenesis protein compare
ABIE40_RS04065 -1.6 -10.7 cytochrome c oxidase subunit I compare
ABIE40_RS05680 -1.6 -5.8 cytochrome c maturation protein CcmE compare
ABIE40_RS15345 -1.6 -6.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS05270 -1.6 -9.4 2-dehydro-3-deoxygalactonokinase compare
ABIE40_RS18290 -1.6 -9.3 heme ABC transporter permease compare
ABIE40_RS04085 -1.6 -6.4 cytochrome c oxidase subunit 3 compare
ABIE40_RS22660 -1.6 -3.1 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS04080 -1.6 -8.3 cytochrome c oxidase assembly protein compare
ABIE40_RS06915 -1.6 -9.0 COX15/CtaA family protein compare
ABIE40_RS09170 -1.6 -3.5 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS05260 -1.6 -7.8 SMP-30/gluconolactonase/LRE family protein compare
ABIE40_RS09800 -1.6 -5.6 MerR family DNA-binding transcriptional regulator compare
ABIE40_RS15670 -1.5 -4.4 anti-sigma factor compare
ABIE40_RS00235 -1.5 -4.5 cytochrome c family protein compare
ABIE40_RS04215 -1.5 -2.2 sensor domain-containing phosphodiesterase compare
ABIE40_RS00930 -1.5 -5.6 ABC transporter permease compare
ABIE40_RS18300 -1.5 -5.6 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS20370 -1.5 -1.9 type II toxin-antitoxin system Phd/YefM family antitoxin compare
ABIE40_RS17010 -1.4 -5.3 sugar ABC transporter permease compare
ABIE40_RS14015 -1.4 -7.6 ROK family transcriptional regulator compare
ABIE40_RS13130 -1.4 -6.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS28815 -1.4 -4.9 GNAT family N-acetyltransferase compare
ABIE40_RS16750 -1.4 -9.5 GH1 family beta-glucosidase compare
ABIE40_RS24490 -1.4 -1.3 flavin reductase compare
ABIE40_RS03155 -1.4 -8.7 substrate-binding domain-containing protein compare
ABIE40_RS18640 -1.4 -7.3 M48 family metalloprotease compare
ABIE40_RS30865 -1.4 -1.4 CheR family methyltransferase compare
ABIE40_RS14595 -1.4 -1.4 urease accessory protein UreE compare
ABIE40_RS15650 -1.4 -4.8 TIGR00282 family metallophosphoesterase compare
ABIE40_RS13125 -1.4 -8.8 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS08500 -1.4 -1.7 preprotein translocase subunit YajC compare
ABIE40_RS18685 -1.4 -3.8 beta-ketoacyl-ACP reductase compare
ABIE40_RS18125 -1.3 -5.1 translational GTPase TypA compare
ABIE40_RS27255 -1.3 -1.4 hypothetical protein compare
ABIE40_RS20635 -1.3 -2.2 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS04060 -1.3 -6.6 cytochrome c oxidase subunit II compare
ABIE40_RS24310 -1.3 -4.7 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS28395 -1.2 -3.0 low affinity iron permease family protein compare
ABIE40_RS13120 -1.2 -5.7 cytochrome c1 compare
ABIE40_RS01135 -1.2 -0.7 50S ribosomal protein L20 compare
ABIE40_RS08645 -1.2 -3.4 LL-diaminopimelate aminotransferase compare
ABIE40_RS30720 -1.2 -1.3 hypothetical protein compare
ABIE40_RS10140 -1.2 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS10995 -1.2 -8.3 glycoside hydrolase family 2 protein compare
ABIE40_RS16170 -1.2 -2.1 DUF882 domain-containing protein compare
ABIE40_RS20890 -1.2 -2.7 DUF934 domain-containing protein compare
ABIE40_RS09335 -1.2 -7.6 type I glutamate--ammonia ligase compare
ABIE40_RS01055 -1.2 -3.8 translation elongation factor 4 compare
ABIE40_RS18690 -1.1 -5.4 acetyl-CoA C-acetyltransferase compare
ABIE40_RS14455 -1.1 -2.0 NepR family anti-sigma factor compare
ABIE40_RS24380 -1.1 -5.9 FGGY-family carbohydrate kinase compare
ABIE40_RS28025 -1.1 -2.5 VOC family protein compare
ABIE40_RS18280 -1.1 -3.5 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS18285 -1.1 -4.1 heme exporter protein CcmB compare
ABIE40_RS02075 -1.1 -5.5 ROK family transcriptional regulator compare
ABIE40_RS15760 -1.1 -3.0 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS18720 -1.1 -1.5 polyprenyl synthetase family protein compare
ABIE40_RS16390 -1.1 -0.8 hypothetical protein compare
ABIE40_RS24355 -1.1 -4.9 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS15855 -1.1 -1.3 cell division protein ZapA compare
ABIE40_RS18255 -1.0 -1.3 hypothetical protein compare
ABIE40_RS19385 -1.0 -4.0 adenosylhomocysteinase compare


Specific Phenotypes

For 18 genes in this experiment

For carbon source L-Asparagine in Rhizobium sp. OAE497

For carbon source L-Asparagine across organisms