Experiment set1IT061 for Rhizobium sp. OAE497

Compare to:

L-Asparagine carbon source

200 most detrimental genes:

  gene name fitness t score description  
ABIE40_RS11020 +2.9 18.1 substrate-binding domain-containing protein compare
ABIE40_RS23250 +2.8 18.2 hypothetical protein compare
ABIE40_RS17165 +2.0 3.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS17160 +1.9 5.1 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS11000 +1.9 10.4 ABC transporter ATP-binding protein compare
ABIE40_RS18695 +1.6 9.4 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE40_RS11010 +1.6 8.3 sugar ABC transporter permease compare
ABIE40_RS11005 +1.4 6.4 carbohydrate ABC transporter permease compare
ABIE40_RS02925 +1.4 2.7 hypothetical protein compare
ABIE40_RS02345 +1.3 3.3 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS03815 +1.3 1.8 DUF6101 family protein compare
ABIE40_RS05715 +1.2 6.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS04975 +1.2 2.4 AAA family ATPase compare
ABIE40_RS22770 +1.2 3.9 hypothetical protein compare
ABIE40_RS11015 +1.2 4.2 ABC transporter substrate-binding protein compare
ABIE40_RS03070 +1.1 5.1 winged helix-turn-helix domain-containing protein compare
ABIE40_RS17310 +1.1 2.3 hypothetical protein compare
ABIE40_RS15425 +1.1 4.4 sigma-54 dependent transcriptional regulator compare
ABIE40_RS02910 +1.1 6.3 flagellar basal-body MS-ring/collar protein FliF compare
ABIE40_RS03095 +1.1 2.5 flagellar biosynthesis repressor FlbT compare
ABIE40_RS29110 +1.1 2.4 GFA family protein compare
ABIE40_RS27865 +1.1 1.6 PepSY domain-containing protein compare
ABIE40_RS07520 +1.1 4.5 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS01945 +1.0 2.7 calcium-binding protein compare
ABIE40_RS03000 +1.0 6.2 MotE family protein compare
ABIE40_RS02920 +1.0 7.2 helix-turn-helix transcriptional regulator compare
ABIE40_RS09600 +1.0 1.3 FecR family protein compare
ABIE40_RS02915 +1.0 5.2 helix-turn-helix transcriptional regulator compare
ABIE40_RS13245 +1.0 1.3 CoA pyrophosphatase compare
ABIE40_RS02935 +1.0 5.2 flagellar motor switch protein FliG compare
ABIE40_RS22805 +1.0 3.9 ATP-binding cassette domain-containing protein compare
ABIE40_RS12620 +1.0 2.6 molybdopterin-binding protein compare
ABIE40_RS29115 +1.0 1.5 DUF3606 domain-containing protein compare
ABIE40_RS26805 +1.0 1.2 chaperone modulator CbpM compare
ABIE40_RS08140 +1.0 7.0 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS11605 +1.0 6.1 AsmA-like C-terminal region-containing protein compare
ABIE40_RS02985 +1.0 5.1 flagellar basal-body rod protein FlgG compare
ABIE40_RS30520 +1.0 1.2 hypothetical protein compare
ABIE40_RS17155 +0.9 5.9 extracellular solute-binding protein compare
ABIE40_RS21990 +0.9 1.2 organic hydroperoxide resistance protein compare
ABIE40_RS05595 +0.9 2.3 DUF3168 domain-containing protein compare
ABIE40_RS03130 +0.9 4.7 hypothetical protein compare
ABIE40_RS03090 +0.9 6.1 flagellar biosynthesis regulator FlaF compare
ABIE40_RS20060 +0.9 5.0 Gfo/Idh/MocA family oxidoreductase compare
ABIE40_RS09760 +0.9 6.2 transglutaminase-like cysteine peptidase compare
ABIE40_RS02990 +0.9 4.8 flagellar basal body P-ring formation chaperone FlgA compare
ABIE40_RS03100 +0.9 5.2 flagellar hook assembly protein FlgD compare
ABIE40_RS18005 +0.9 6.3 cell division protein ZapE compare
ABIE40_RS02930 +0.9 7.0 flagellar biosynthesis protein FlhB compare
ABIE40_RS00645 +0.9 6.3 nicotinate phosphoribosyltransferase compare
ABIE40_RS03015 +0.9 5.4 flagellar type III secretion system pore protein FliP compare
ABIE40_RS03135 +0.9 4.3 hypothetical protein compare
ABIE40_RS10100 +0.9 4.1 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS02950 +0.9 5.2 flagellar motor stator protein MotA compare
ABIE40_RS04185 +0.9 4.2 YqgE/AlgH family protein compare
ABIE40_RS03115 +0.8 6.1 flagellar biosynthetic protein FliR compare
ABIE40_RS00985 +0.8 2.9 DoxX family protein compare
ABIE40_RS03750 +0.8 2.0 hypothetical protein compare
ABIE40_RS03075 +0.8 4.3 flagellar hook protein FlgE compare
ABIE40_RS00155 +0.8 5.0 ribonuclease D compare
ABIE40_RS07265 +0.8 3.7 methylmalonyl-CoA epimerase compare
ABIE40_RS09570 +0.8 1.2 MarR family transcriptional regulator compare
ABIE40_RS03110 +0.8 4.3 flagellar biosynthesis protein FlhA compare
ABIE40_RS02905 +0.8 1.7 hypothetical protein compare
ABIE40_RS03005 +0.8 5.5 flagellar basal body L-ring protein FlgH compare
ABIE40_RS19220 +0.8 2.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABIE40_RS27465 +0.8 2.6 hypothetical protein compare
ABIE40_RS13835 +0.8 0.7 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase compare
ABIE40_RS19670 +0.8 1.1 ABC transporter ATP-binding protein compare
ABIE40_RS02980 +0.8 2.5 flagellar hook-basal body complex protein FliE compare
ABIE40_RS03055 +0.8 5.1 chemotaxis protein MotC compare
ABIE40_RS28485 +0.8 1.3 hypothetical protein compare
ABIE40_RS17575 +0.8 4.5 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
ABIE40_RS11465 +0.7 1.8 nitrile hydratase accessory protein compare
ABIE40_RS01640 +0.7 1.9 ribonuclease PH compare
ABIE40_RS14075 +0.7 1.9 hypothetical protein compare
ABIE40_RS19165 +0.7 3.4 DUF1013 domain-containing protein compare
ABIE40_RS17060 +0.7 1.2 OsmC family protein compare
ABIE40_RS30790 +0.7 2.3 manganese catalase family protein compare
ABIE40_RS17150 +0.7 5.0 sugar ABC transporter permease compare
ABIE40_RS17655 +0.7 3.8 J domain-containing protein compare
ABIE40_RS29890 +0.7 1.7 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS03060 +0.7 4.8 flagellar hook-length control protein FliK compare
ABIE40_RS27805 +0.7 2.2 hypothetical protein compare
ABIE40_RS04005 +0.7 1.8 DnaJ C-terminal domain-containing protein compare
ABIE40_RS12075 +0.7 2.3 ABC transporter ATP-binding protein compare
ABIE40_RS03010 +0.7 4.3 flagellar basal body-associated FliL family protein compare
ABIE40_RS24870 +0.7 1.9 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS02940 +0.7 3.6 flagellar motor switch protein FliN compare
ABIE40_RS03485 +0.7 4.7 MAPEG family protein compare
ABIE40_RS01355 +0.7 4.9 phospholipid N-methyltransferase PmtA compare
ABIE40_RS02955 +0.7 4.2 flagellar basal-body rod protein FlgF compare
ABIE40_RS02995 +0.7 3.1 flagellar basal body P-ring protein FlgI compare
ABIE40_RS16645 +0.7 5.2 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS20055 +0.7 1.1 sugar phosphate isomerase/epimerase compare
ABIE40_RS15955 +0.7 2.5 MotA/TolQ/ExbB proton channel family protein compare
ABIE40_RS14490 +0.7 2.5 rhodanese-like domain-containing protein compare
ABIE40_RS24245 +0.7 0.9 helix-turn-helix domain-containing protein compare
ABIE40_RS28045 +0.7 1.2 hypothetical protein compare
ABIE40_RS05585 +0.7 1.9 head-tail connector protein compare
ABIE40_RS19425 +0.7 2.7 alpha-ketoglutarate-dependent dioxygenase AlkB compare
ABIE40_RS26890 +0.7 1.2 DUF983 domain-containing protein compare
ABIE40_RS30345 +0.6 1.0 hypothetical protein compare
ABIE40_RS27100 +0.6 0.7 type II toxin-antitoxin system VapC family toxin compare
ABIE40_RS02975 +0.6 3.1 flagellar basal body rod protein FlgC compare
ABIE40_RS15385 +0.6 3.2 ABC transporter permease compare
ABIE40_RS13755 +0.6 1.1 hypothetical protein compare
ABIE40_RS03120 +0.6 3.2 hypothetical protein compare
ABIE40_RS00600 +0.6 1.6 methylglyoxal synthase compare
ABIE40_RS15030 +0.6 2.3 Rrf2 family transcriptional regulator compare
ABIE40_RS09755 +0.6 2.8 alpha/beta fold hydrolase compare
ABIE40_RS02960 +0.6 2.9 flagellar protein export ATPase FliI compare
ABIE40_RS28100 +0.6 1.5 PRC-barrel domain-containing protein compare
ABIE40_RS14650 +0.6 1.0 urea ABC transporter ATP-binding protein UrtD compare
ABIE40_RS15065 +0.6 3.2 hypothetical protein compare
ABIE40_RS09575 +0.6 1.2 hypothetical protein compare
ABIE40_RS22390 +0.6 0.8 cytochrome c compare
ABIE40_RS14760 +0.6 3.7 response regulator compare
ABIE40_RS22130 +0.6 1.3 hypothetical protein compare
ABIE40_RS23075 +0.6 0.9 RT0821/Lpp0805 family surface protein compare
ABIE40_RS00505 +0.6 3.0 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN compare
ABIE40_RS14435 +0.6 2.3 heme ABC transporter ATP-binding protein compare
ABIE40_RS07480 +0.6 3.0 DUF2155 domain-containing protein compare
ABIE40_RS07435 +0.6 2.3 hypothetical protein compare
ABIE40_RS29225 +0.6 2.4 hypothetical protein compare
ABIE40_RS15060 +0.6 1.8 hypothetical protein compare
ABIE40_RS24590 +0.6 4.1 sulfate ABC transporter substrate-binding protein compare
ABIE40_RS13585 +0.6 1.6 oligopeptide/dipeptide ABC transporter ATP-binding protein compare
ABIE40_RS26395 +0.6 1.3 hypothetical protein compare
ABIE40_RS15775 +0.6 2.3 DinB family protein compare
ABIE40_RS08190 +0.6 3.4 glycosyltransferase family 2 protein compare
ABIE40_RS02885 +0.6 4.1 protein-glutamate O-methyltransferase CheR compare
ABIE40_RS03080 +0.6 3.8 flagellar hook-associated protein FlgK compare
ABIE40_RS08850 +0.6 1.6 DUF3597 domain-containing protein compare
ABIE40_RS27985 +0.6 2.4 HWE histidine kinase domain-containing protein compare
ABIE40_RS11435 +0.6 1.4 DUF922 domain-containing protein compare
ABIE40_RS08600 +0.6 3.1 trigger factor compare
ABIE40_RS03505 +0.6 1.3 DUF1127 domain-containing protein compare
ABIE40_RS21385 +0.6 1.6 hypothetical protein compare
ABIE40_RS10310 +0.6 1.8 STM3941 family protein compare
ABIE40_RS04200 +0.6 2.6 TetR/AcrR family transcriptional regulator compare
ABIE40_RS10165 +0.6 1.9 DUF1127 domain-containing protein compare
ABIE40_RS27375 +0.6 1.2 response regulator compare
ABIE40_RS20160 +0.6 2.5 isochorismatase family cysteine hydrolase compare
ABIE40_RS15105 +0.6 2.2 PfkB family carbohydrate kinase compare
ABIE40_RS04225 +0.6 4.5 pitrilysin family protein compare
ABIE40_RS11035 +0.6 2.8 NADP-dependent phosphogluconate dehydrogenase compare
ABIE40_RS19875 +0.6 1.4 hypothetical protein compare
ABIE40_RS19370 +0.6 2.9 nucleotidyltransferase family protein compare
ABIE40_RS17355 +0.6 3.0 ComF family protein compare
ABIE40_RS25725 +0.6 1.1 helix-turn-helix domain-containing protein compare
ABIE40_RS12850 +0.6 3.3 glycosyltransferase compare
ABIE40_RS05280 +0.6 3.1 IclR family transcriptional regulator compare
ABIE40_RS15950 +0.6 2.0 peptidoglycan -binding protein compare
ABIE40_RS20230 +0.6 2.3 hypothetical protein compare
ABIE40_RS02890 +0.6 2.9 protein-glutamate O-methylesterase CheB compare
ABIE40_RS11065 +0.6 1.1 zinc-binding dehydrogenase compare
ABIE40_RS17445 +0.6 3.6 cation:proton antiporter compare
ABIE40_RS19475 +0.6 3.6 ATP-dependent protease ATPase subunit HslU compare
ABIE40_RS13550 +0.6 2.2 DUF4160 domain-containing protein compare
ABIE40_RS00035 +0.6 3.6 hypothetical protein compare
ABIE40_RS17205 +0.6 2.9 lysylphosphatidylglycerol synthase domain-containing protein compare
ABIE40_RS20290 +0.5 1.9 dihydrofolate reductase family protein compare
ABIE40_RS07540 +0.5 2.8 hypothetical protein compare
ABIE40_RS03870 +0.5 1.4 metalloregulator ArsR/SmtB family transcription factor compare
ABIE40_RS03225 +0.5 2.9 methyl-accepting chemotaxis protein compare
ABIE40_RS08575 +0.5 1.3 DUF1127 domain-containing protein compare
ABIE40_RS30355 +0.5 1.8 response regulator compare
ABIE40_RS19310 +0.5 2.1 fumarylacetoacetate hydrolase family protein compare
ABIE40_RS03315 +0.5 1.1 DUF4174 domain-containing protein compare
ABIE40_RS03540 +0.5 3.2 adenosylhomocysteinase compare
ABIE40_RS27145 +0.5 1.7 hypothetical protein compare
ABIE40_RS10480 +0.5 3.9 LTA synthase family protein compare
ABIE40_RS20050 +0.5 4.0 extracellular solute-binding protein compare
ABIE40_RS18440 +0.5 0.7 Trm112 family protein compare
ABIE40_RS08730 +0.5 2.8 D-Ala-D-Ala carboxypeptidase family metallohydrolase compare
ABIE40_RS05380 +0.5 1.1 methyltransferase compare
ABIE40_RS01790 +0.5 0.9 type II toxin-antitoxin system RelB/DinJ family antitoxin compare
ABIE40_RS07340 +0.5 3.7 MFS transporter compare
ABIE40_RS24575 +0.5 2.3 sulfate/molybdate ABC transporter ATP-binding protein compare
ABIE40_RS05605 +0.5 2.1 phage major tail protein, TP901-1 family compare
ABIE40_RS03045 +0.5 2.7 hypothetical protein compare
ABIE40_RS06140 +0.5 1.1 HD family hydrolase compare
ABIE40_RS25970 +0.5 1.1 GNAT family N-acetyltransferase compare
ABIE40_RS19970 +0.5 1.6 L-rhamnose mutarotase compare
ABIE40_RS07820 +0.5 3.7 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE40_RS15420 +0.5 2.5 tripartite tricarboxylate transporter substrate binding protein BugD compare
ABIE40_RS26040 +0.5 0.8 TetR/AcrR family transcriptional regulator compare
ABIE40_RS29455 +0.5 1.6 dienelactone hydrolase family protein compare
ABIE40_RS13220 +0.5 0.9 hypothetical protein compare
ABIE40_RS15455 +0.5 0.6 histidine phosphatase family protein compare
ABIE40_RS30175 +0.5 2.4 hypothetical protein compare
ABIE40_RS17765 +0.5 1.2 xanthine dehydrogenase family protein subunit M compare
ABIE40_RS06695 +0.5 1.7 DUF6163 family protein compare
ABIE40_RS11725 +0.5 0.7 hypothetical protein compare
ABIE40_RS02945 +0.5 2.9 FliM/FliN family flagellar motor switch protein compare
ABIE40_RS22815 +0.5 1.2 MocE family 2Fe-2S type ferredoxin compare
ABIE40_RS25875 +0.5 1.1 hypothetical protein compare
ABIE40_RS10340 +0.5 1.7 flagellar biosynthetic protein FliO compare
ABIE40_RS08270 +0.5 2.2 GNAT family N-acetyltransferase compare


Specific Phenotypes

For 18 genes in this experiment

For carbon source L-Asparagine in Rhizobium sp. OAE497

For carbon source L-Asparagine across organisms