Experiment set1IT059 for Rhizobium sp. OAE497

Compare to:

L-Threonine carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18575 -6.8 -4.7 SIS domain-containing protein compare
ABIE40_RS19355 -6.7 -4.5 thioredoxin compare
ABIE40_RS19050 -6.5 -6.3 3-isopropylmalate dehydrogenase compare
ABIE40_RS18590 -6.4 -8.8 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.4 -7.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS00245 -6.4 -7.6 prephenate dehydratase compare
ABIE40_RS11950 -6.3 -4.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS13330 -6.1 -4.2 2-isopropylmalate synthase compare
ABIE40_RS17525 -6.0 -3.0 lipoprotein compare
ABIE40_RS18380 -5.8 -12.4 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS18775 -5.7 -10.3 pyruvate carboxylase compare
ABIE40_RS09095 -5.5 -3.8 PAS domain-containing sensor histidine kinase compare
ABIE40_RS06555 -5.4 -2.8 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS19040 -5.3 -7.3 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS18920 -5.3 -6.4 glutamate 5-kinase compare
ABIE40_RS06730 -5.3 -3.7 riboflavin synthase compare
ABIE40_RS17530 -5.2 -3.6 diaminopimelate decarboxylase compare
ABIE40_RS09545 -5.2 -3.1 anthranilate phosphoribosyltransferase compare
ABIE40_RS16320 -5.2 -3.6 histidinol-phosphatase compare
ABIE40_RS03665 -5.1 -3.5 ATP phosphoribosyltransferase compare
ABIE40_RS24490 -5.0 -1.5 flavin reductase compare
ABIE40_RS09150 -5.0 -17.1 nitrite/sulfite reductase compare
ABIE40_RS01970 -5.0 -3.4 acetylglutamate kinase compare
ABIE40_RS03660 -5.0 -3.4 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS02325 -5.0 -3.4 ornithine carbamoyltransferase compare
ABIE40_RS09660 -4.9 -12.4 AI-2E family transporter compare
ABIE40_RS19435 -4.9 -2.5 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS20460 -4.9 -3.3 precorrin-3B synthase compare
ABIE40_RS10725 -4.9 -3.4 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS02725 -4.8 -5.7 histidinol dehydrogenase compare
ABIE40_RS19460 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS17020 -4.7 -10.5 sugar-binding transcriptional regulator compare
ABIE40_RS16655 -4.7 -6.4 creatininase family protein compare
ABIE40_RS10720 -4.7 -2.7 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS11105 -4.6 -3.2 cobyrinate a,c-diamide synthase compare
ABIE40_RS06930 -4.6 -3.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19440 -4.6 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS11175 -4.6 -3.1 cobyric acid synthase compare
ABIE40_RS19330 -4.5 -3.1 phosphoribosylanthranilate isomerase compare
ABIE40_RS09725 -4.5 -3.1 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS13410 -4.5 -3.1 anthranilate synthase compare
ABIE40_RS10180 -4.5 -3.1 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS17650 -4.5 -3.1 cobaltochelatase subunit CobS compare
ABIE40_RS12925 -4.4 -10.7 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS06270 -4.4 -5.3 amidophosphoribosyltransferase compare
ABIE40_RS11165 -4.4 -2.6 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS20440 -4.3 -2.9 cobalt-precorrin-6A reductase compare
ABIE40_RS08645 -4.3 -4.2 LL-diaminopimelate aminotransferase compare
ABIE40_RS02320 -4.3 -3.0 aspartate aminotransferase family protein compare
ABIE40_RS20435 -4.3 -2.9 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS07740 -4.3 -3.1 elongation factor Tu compare
ABIE40_RS08635 -4.2 -11.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS09155 -4.2 -4.6 DUF934 domain-containing protein compare
ABIE40_RS17595 -4.2 -2.9 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.2 -2.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS09140 -4.2 -10.7 siroheme synthase CysG compare
ABIE40_RS11095 -4.2 -2.9 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS11495 -4.1 -4.0 acetolactate synthase 3 large subunit compare
ABIE40_RS11150 -4.1 -8.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS19130 -4.0 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS20455 -4.0 -2.0 precorrin-8X methylmutase compare
ABIE40_RS20450 -4.0 -3.8 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS09090 -3.9 -7.5 nitrogen regulation protein NR(I) compare
ABIE40_RS20430 -3.9 -2.7 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS09360 -3.9 -4.6 excinuclease ABC subunit UvrA compare
ABIE40_RS14985 -3.8 -2.2 glycosyltransferase compare
ABIE40_RS08140 -3.8 -15.8 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS10345 -3.8 -5.2 RNA polymerase-binding protein DksA compare
ABIE40_RS03405 -3.8 -2.6 anti-sigma factor compare
ABIE40_RS20465 -3.8 -2.6 precorrin-6A synthase (deacetylating) compare
ABIE40_RS06560 -3.8 -6.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS19445 -3.8 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS08005 -3.8 -2.6 dihydroxy-acid dehydratase compare
ABIE40_RS00340 -3.7 -2.6 30S ribosome-binding factor RbfA compare
ABIE40_RS17645 -3.7 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS00725 -3.7 -3.6 DNA cytosine methyltransferase compare
ABIE40_RS11155 -3.7 -6.6 cobaltochelatase subunit CobN compare
ABIE40_RS12135 -3.7 -2.5 methionine synthase compare
ABIE40_RS14025 -3.6 -12.8 sugar ABC transporter permease compare
ABIE40_RS06050 -3.6 -6.4 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS19480 -3.6 -2.5 DUF1402 family protein compare
ABIE40_RS11875 -3.5 -2.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS00930 -3.5 -8.7 ABC transporter permease compare
ABIE40_RS15345 -3.5 -10.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS15920 -3.5 -1.0 50S ribosomal protein L31 compare
ABIE40_RS05430 -3.4 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS18570 -3.4 -12.1 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE40_RS14990 -3.4 -10.4 glycosyltransferase family 2 protein compare
ABIE40_RS18925 -3.4 -5.1 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS00935 -3.4 -5.1 ABC transporter substrate-binding protein compare
ABIE40_RS01730 -3.4 -2.3 NifU family protein compare
ABIE40_RS17590 -3.3 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS03485 -3.2 -12.4 MAPEG family protein compare
ABIE40_RS16070 -3.2 -4.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS10155 -3.2 -1.8 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS01930 -3.2 -2.2 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS08935 -3.1 -3.1 RIP metalloprotease RseP compare
ABIE40_RS20445 -3.1 -1.3 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS00580 -3.0 -3.1 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS10200 -3.0 -1.9 Grx4 family monothiol glutaredoxin compare
ABIE40_RS18055 -3.0 -4.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS16570 -2.9 -3.4 tetratricopeptide repeat protein compare
ABIE40_RS06725 -2.9 -4.9 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS18580 -2.9 -2.4 GntR family transcriptional regulator compare
ABIE40_RS14030 -2.9 -5.3 ATP-binding cassette domain-containing protein compare
ABIE40_RS14980 -2.9 -5.7 glycoside hydrolase family 16 protein compare
ABIE40_RS19700 -2.8 -2.7 MBL fold metallo-hydrolase compare
ABIE40_RS03190 -2.8 -5.2 phosphogluconate dehydratase compare
ABIE40_RS14020 -2.8 -9.8 D-xylose ABC transporter substrate-binding protein compare
ABIE40_RS19395 -2.8 -2.6 PTS sugar transporter subunit IIA compare
ABIE40_RS05665 -2.7 -4.7 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS08970 -2.7 -9.0 citrate synthase compare
ABIE40_RS12230 -2.7 -1.7 carboxymuconolactone decarboxylase family protein compare
ABIE40_RS04475 -2.7 -9.6 phosphoadenylyl-sulfate reductase compare
ABIE40_RS30315 -2.6 -1.4 hypothetical protein compare
ABIE40_RS18880 -2.6 -10.9 UDP-glucose 4-epimerase GalE compare
ABIE40_RS19360 -2.6 -3.9 double-strand break repair helicase AddA compare
ABIE40_RS03155 -2.5 -9.5 substrate-binding domain-containing protein compare
ABIE40_RS09720 -2.5 -3.8 GTP cyclohydrolase I FolE compare
ABIE40_RS19365 -2.5 -3.4 double-strand break repair protein AddB compare
ABIE40_RS08600 -2.4 -5.1 trigger factor compare
ABIE40_RS01705 -2.4 -9.5 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS00490 -2.4 -10.5 DNA polymerase I compare
ABIE40_RS03815 -2.4 -2.1 DUF6101 family protein compare
ABIE40_RS06710 -2.4 -3.9 L,D-transpeptidase family protein compare
ABIE40_RS19455 -2.4 -1.6 DUF2628 domain-containing protein compare
ABIE40_RS27295 -2.3 -2.1 hypothetical protein compare
ABIE40_RS09540 -2.3 -5.3 peptidylprolyl isomerase compare
ABIE40_RS22300 -2.3 -3.9 superoxide dismutase compare
ABIE40_RS19385 -2.2 -6.8 adenosylhomocysteinase compare
ABIE40_RS16060 -2.2 -3.4 DUF465 domain-containing protein compare
ABIE40_RS12360 -2.2 -8.7 DUF5131 family protein compare
ABIE40_RS28785 -2.2 -1.7 ABC-three component system middle component 1 compare
ABIE40_RS13725 -2.2 -2.3 ABC transporter ATP-binding protein compare
ABIE40_RS06220 -2.2 -11.7 citramalate synthase compare
ABIE40_RS07200 -2.2 -1.8 NADH-quinone oxidoreductase subunit E compare
ABIE40_RS17010 -2.2 -7.6 sugar ABC transporter permease compare
ABIE40_RS04470 -2.1 -9.7 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS13370 -2.1 -10.1 CDF family cation efflux transporter EmfA compare
ABIE40_RS29240 -2.1 -1.4 cold-shock protein compare
ABIE40_RS18300 -2.1 -6.4 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS18125 -2.1 -6.2 translational GTPase TypA compare
ABIE40_RS08500 -2.1 -1.5 preprotein translocase subunit YajC compare
ABIE40_RS01765 -2.1 -4.4 [protein-PII] uridylyltransferase compare
ABIE40_RS04465 -2.1 -9.4 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS05660 -2.0 -2.3 response regulator transcription factor compare
ABIE40_RS04070 -2.0 -5.8 heme o synthase compare
ABIE40_RS07105 -2.0 -2.6 DNA-binding protein HupB compare
ABIE40_RS16170 -2.0 -2.3 DUF882 domain-containing protein compare
ABIE40_RS23250 -1.9 -7.7 hypothetical protein compare
ABIE40_RS11960 -1.9 -2.2 energy-dependent translational throttle protein EttA compare
ABIE40_RS09170 -1.9 -3.7 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS11060 -1.9 -3.6 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS17565 -1.9 -2.3 ABC transporter permease compare
ABIE40_RS05680 -1.9 -5.9 cytochrome c maturation protein CcmE compare
ABIE40_RS11490 -1.9 -4.4 acetolactate synthase small subunit compare
ABIE40_RS04080 -1.8 -7.5 cytochrome c oxidase assembly protein compare
ABIE40_RS19245 -1.8 -3.4 Maf-like protein compare
ABIE40_RS04215 -1.8 -1.9 sensor domain-containing phosphodiesterase compare
ABIE40_RS16490 -1.8 -7.3 glycogen synthase GlgA compare
ABIE40_RS08425 -1.8 -1.9 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS13125 -1.8 -8.5 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS05685 -1.8 -7.4 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS18735 -1.8 -5.0 TetR/AcrR family transcriptional regulator compare
ABIE40_RS18290 -1.8 -8.0 heme ABC transporter permease compare
ABIE40_RS01355 -1.7 -7.0 phospholipid N-methyltransferase PmtA compare
ABIE40_RS15855 -1.7 -1.8 cell division protein ZapA compare
ABIE40_RS09145 -1.7 -3.1 DUF2849 domain-containing protein compare
ABIE40_RS14955 -1.7 -5.9 sugar transferase compare
ABIE40_RS13120 -1.7 -5.6 cytochrome c1 compare
ABIE40_RS02690 -1.7 -2.6 DUF982 domain-containing protein compare
ABIE40_RS02580 -1.7 -9.4 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS08980 -1.7 -4.7 transcriptional repressor LexA compare
ABIE40_RS09085 -1.7 -3.8 nitrogen regulation protein NR(II) compare
ABIE40_RS10415 -1.6 -6.9 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS01645 -1.6 -3.9 heat-inducible transcriptional repressor HrcA compare
ABIE40_RS27685 -1.6 -1.3 hypothetical protein compare
ABIE40_RS13130 -1.6 -5.9 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS10425 -1.6 -5.5 ABC transporter ATP-binding protein compare
ABIE40_RS10140 -1.6 -2.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS27520 -1.6 -1.2 hypothetical protein compare
ABIE40_RS04075 -1.6 -3.3 hypothetical protein compare
ABIE40_RS15650 -1.6 -4.6 TIGR00282 family metallophosphoesterase compare
ABIE40_RS09950 -1.6 -8.9 aminomethyl-transferring glycine dehydrogenase compare
ABIE40_RS23670 -1.6 -1.2 hypothetical protein compare
ABIE40_RS29480 -1.6 -2.0 hypothetical protein compare
ABIE40_RS03515 -1.6 -2.9 glutamate--cysteine ligase compare
ABIE40_RS11530 -1.6 -6.0 protease modulator HflC compare
ABIE40_RS04975 -1.6 -1.4 AAA family ATPase compare
ABIE40_RS24730 -1.5 -4.9 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS16210 -1.5 -6.5 homospermidine synthase compare
ABIE40_RS15010 -1.5 -5.9 metallophosphoesterase compare
ABIE40_RS09945 -1.5 -4.7 glycine cleavage system protein GcvH compare
ABIE40_RS04060 -1.5 -6.2 cytochrome c oxidase subunit II compare
ABIE40_RS22665 -1.5 -2.4 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS08865 -1.5 -5.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS19260 -1.5 -2.1 DNA polymerase III subunit epsilon compare
ABIE40_RS02305 -1.5 -3.4 phosphate signaling complex protein PhoU compare
ABIE40_RS11535 -1.4 -5.5 FtsH protease activity modulator HflK compare
ABIE40_RS26440 -1.4 -1.1 Ku protein compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source L-Threonine in Rhizobium sp. OAE497

For carbon source L-Threonine across organisms