| | gene | name | fitness | t score | description | |
|---|
| b2312 | purF | -5.6 | -6.7 | amidophosphoribosyltransferase (NCBI) | compare |
| b4232 | fbp | -5.5 | -11.6 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b1261 | trpB | -5.3 | -4.2 | tryptophan synthase subunit beta (NCBI) | compare |
| b2476 | purC | -4.9 | -4.5 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b2499 | purM | -4.9 | -5.8 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b4006 | purH | -4.9 | -13.4 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b1260 | trpA | -4.8 | -6.7 | tryptophan synthase subunit alpha (NCBI) | compare |
| b2188 | yejM | -4.8 | -10.8 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2285 | nuoE | -4.7 | -3.2 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0522 | purK | -4.7 | -10.0 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b0728 | sucC | -4.6 | -8.3 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0729 | sucD | -4.6 | -4.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1281 | pyrF | -4.5 | -5.4 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1062 | pyrC | -4.5 | -10.0 | dihydroorotase (NCBI) | compare |
| b4005 | purD | -4.5 | -10.4 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b0945 | pyrD | -4.4 | -13.9 | dihydroorotate dehydrogenase (NCBI) | compare |
| b3642 | pyrE | -4.4 | -5.2 | orotate phosphoribosyltransferase (NCBI) | compare |
| b4245 | pyrB | -4.4 | -12.1 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b2500 | purN | -4.4 | -5.7 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b0523 | purE | -4.3 | -5.1 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b2557 | purL | -4.2 | -11.9 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b0032 | carA | -4.1 | -8.9 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b3844 | fre | -4.0 | -7.1 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2276 | nuoN | -4.0 | -7.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0033 | carB | -3.9 | -17.0 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2286 | nuoC | -3.9 | -6.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b4139 | aspA | -3.8 | -12.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3281 | aroE | -3.8 | -19.0 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b2281 | nuoI | -3.7 | -4.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2501 | ppk | -3.7 | -13.1 | polyphosphate kinase (NCBI) | compare |
| b2277 | nuoM | -3.6 | -6.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1264 | trpE | -3.6 | -6.1 | anthranilate synthase component I (NCBI) | compare |
| b1290 | sapF | -3.6 | -4.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1693 | aroD | -3.5 | -9.3 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2320 | pdxB | -3.5 | -9.2 | erythronate-4-phosphate dehydrogenase (NCBI) | compare |
| b2278 | nuoL | -3.5 | -10.3 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2830 | nudH | -3.5 | -2.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2280 | nuoJ | -3.5 | -7.3 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1262 | trpC | -3.4 | -6.5 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b2283 | nuoG | -3.4 | -9.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2284 | nuoF | -3.4 | -6.5 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1292 | sapC | -3.4 | -4.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0439 | lon | -3.3 | -6.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0052 | pdxA | -3.3 | -11.8 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| b2564 | pdxJ | -3.3 | -6.2 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b3389 | aroB | -3.3 | -14.1 | 3-dehydroquinate synthase (NCBI) | compare |
| b0437 | clpP | -3.3 | -10.2 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0721 | sdhC | -3.3 | -5.8 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0683 | fur | -3.2 | -3.0 | ferric uptake regulator (NCBI) | compare |
| b3390 | aroK | -3.2 | -4.0 | shikimate kinase I (NCBI) | compare |
| b2288 | nuoA | -3.2 | -4.3 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3236 | mdh | -3.1 | -9.1 | malate dehydrogenase (NCBI) | compare |
| b1263 | trpD | -3.0 | -3.8 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b0114 | aceE | -3.0 | -2.1 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0118 | acnB | -3.0 | -2.9 | aconitate hydratase (NCBI) | compare |
| b0723 | sdhA | -3.0 | -12.3 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b3082 | ygjM | -2.9 | -4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0145 | dksA | -2.9 | -5.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0438 | clpX | -2.9 | -10.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2329 | aroC | -2.9 | -6.7 | chorismate synthase (NCBI) | compare |
| b3962 | udhA | -2.9 | -11.3 | putative oxidoreductase (VIMSS) | compare |
| b3870 | glnA | -2.9 | -2.0 | glutamine synthetase (NCBI) | compare |
| b0724 | sdhB | -2.8 | -7.6 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0049 | apaH | -2.8 | -6.5 | diadenosinetetraphosphatase (NCBI) | compare |
| b0750 | nadA | -2.8 | -9.2 | quinolinate synthetase (NCBI) | compare |
| b0428 | cyoE | -2.8 | -8.7 | protoheme IX farnesyltransferase (NCBI) | compare |
| b0726 | sucA | -2.8 | -3.8 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3806 | cyaA | -2.7 | -6.7 | adenylate cyclase (NCBI) | compare |
| b0430 | cyoC | -2.7 | -5.7 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3728 | pstS | -2.7 | -5.9 | phosphate transporter subunit (NCBI) | compare |
| b0630 | lipB | -2.7 | -2.5 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0142 | folK | -2.7 | -1.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0109 | nadC | -2.6 | -7.1 | nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| b4177 | purA | -2.6 | -1.8 | adenylosuccinate synthetase (NCBI) | compare |
| b0908 | aroA | -2.6 | -10.4 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2282 | nuoH | -2.5 | -4.0 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2574 | nadB | -2.5 | -10.2 | L-aspartate oxidase (NCBI) | compare |
| b2287 | nuoB | -2.5 | -4.9 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2894 | xerD | -2.5 | -2.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0431 | cyoB | -2.5 | -12.7 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3725 | pstB | -2.4 | -2.3 | phosphate transporter subunit (NCBI) | compare |
| b0720 | gltA | -2.4 | -7.3 | citrate synthase (NCBI) | compare |
| b0080 | fruR | -2.4 | -8.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0722 | sdhD | -2.4 | -5.4 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0907 | serC | -2.4 | -7.1 | phosphoserine aminotransferase (NCBI) | compare |
| b3414 | gntY | -2.4 | -7.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b2297 | pta | -2.3 | -2.7 | phosphate acetyltransferase (NCBI) | compare |
| b0928 | aspC | -2.2 | -8.0 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b2567 | rnc | -2.2 | -2.1 | ribonuclease III (NCBI) | compare |
| b1129 | phoQ | -2.2 | -9.2 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b3849 | trkH | -2.2 | -11.0 | potassium transporter (NCBI) | compare |
| b1235 | rssB | -2.1 | -9.2 | response regulator of RpoS (NCBI) | compare |
| b3052 | rfaE | -2.1 | -6.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0200 | gmhB | -2.1 | -2.4 | hypothetical protein (NCBI) | compare |
| b3121 | yhaC | -2.1 | -2.4 | hypothetical protein (NCBI) | compare |
| b0222 | lpcA | -2.1 | -3.6 | phosphoheptose isomerase (NCBI) | compare |
| b1084 | rne | -2.1 | -5.7 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b3619 | rfaD | -2.1 | -4.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1704 | aroH | -2.1 | -5.6 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible (NCBI) | conserved |
| b0738 | tolR | -2.1 | -4.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4480 | hdfR | -2.0 | -5.6 | transcriptional regulator HdfR (NCBI) | compare |
| b3621 | rfaC | -2.0 | -6.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b1612 | fumA | -2.0 | -5.7 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b3620 | rfaF | -2.0 | -5.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b4042 | dgkA | -2.0 | -4.1 | diacylglycerol kinase (NCBI) | compare |
| b2279 | nuoK | -2.0 | -2.1 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0564 | appY | -2.0 | -2.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1291 | sapD | -1.9 | -3.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3386 | rpe | -1.9 | -2.2 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b0432 | cyoA | -1.9 | -8.4 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b2318 | truA | -1.9 | -5.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1863 | ruvC | -1.8 | -4.8 | Holliday junction resolvase (NCBI) | compare |
| b3811 | xerC | -1.8 | -3.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2313 | cvpA | -1.8 | -3.4 | membrane protein required for colicin V production (NCBI) | compare |
| b2528 | iscA | -1.8 | -2.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3204 | ptsN | -1.8 | -5.2 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0740 | tolB | -1.8 | -6.0 | translocation protein TolB precursor (NCBI) | compare |
| b0500 | ybbD | -1.8 | -3.1 | hypothetical protein (RefSeq) | compare |
| b2340 | sixA | -1.8 | -4.4 | phosphohistidine phosphatase (NCBI) | compare |
| b0589 | fepG | -1.8 | -6.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b3405 | ompR | -1.8 | -5.6 | osmolarity response regulator (NCBI) | compare |
| b3726 | pstA | -1.7 | -5.7 | phosphate transporter subunit (NCBI) | compare |
| b0737 | tolQ | -1.7 | -4.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0585 | fes | -1.7 | -5.9 | enterobactin/ferric enterobactin esterase (NCBI) | compare |
| b0890 | ftsK | -1.7 | -7.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4630 | ykgP | -1.6 | -3.4 | no description | compare |
| b3839 | tatC | -1.6 | -8.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3993 | thiE | -1.5 | -6.3 | thiamine-phosphate pyrophosphorylase (NCBI) | compare |
| b0739 | tolA | -1.5 | -4.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1130 | phoP | -1.5 | -6.7 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2906 | visC | -1.5 | -6.5 | hypothetical protein (NCBI) | compare |
| b1347 | ydaC | -1.5 | -2.4 | Rac prophage; predicted protein (NCBI) | compare |
| b2114 | metG | -1.5 | -1.9 | methionyl-tRNA synthetase (NCBI) | compare |
| b0592 | fepB | -1.5 | -7.2 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1551 | b1551 | -1.5 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b0588 | fepC | -1.5 | -7.7 | iron-enterobactin transporter subunit (NCBI) | compare |
| b4179 | vacB | -1.5 | -7.9 | putative enzyme (VIMSS) | compare |
| b2055 | wcaE | -1.4 | -3.3 | predicted glycosyl transferase (NCBI) | compare |
| b3764 | yifE | -1.4 | -4.4 | hypothetical protein (NCBI) | compare |
| b4146 | yjeK | -1.4 | -3.7 | predicted lysine aminomutase (NCBI) | compare |
| b3290 | trkA | -1.4 | -3.3 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0741 | pal | -1.4 | -4.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0429 | cyoD | -1.4 | -4.2 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b2168 | fruK | -1.4 | -2.5 | 1-phosphofructokinase (NCBI) | compare |
| b4481 | rffT | -1.4 | -6.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3232 | yhcM | -1.3 | -7.3 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | conserved |
| b0590 | fepD | -1.3 | -5.4 | iron-enterobactin transporter subunit (NCBI) | compare |
| b2103 | thiD | -1.3 | -5.4 | phosphomethylpyrimidine kinase (NCBI) | compare |
| b1860 | ruvB | -1.3 | -1.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b4443 | gcvB | -1.3 | -1.8 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b3991 | thiG | -1.3 | -5.8 | thiamin biosynthesis, thiazole moiety (VIMSS) | compare |
| b3601 | mtlR | -1.2 | -4.7 | DNA-binding repressor (NCBI) | compare |
| b3994 | thiC | -1.2 | -8.7 | thiamine biosynthesis protein ThiC (NCBI) | compare |
| b0134 | panB | -1.2 | -6.2 | 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) | compare |
| b1167 | ymgC | -1.2 | -2.0 | hypothetical protein (NCBI) | compare |
| b4025 | pgi | -1.2 | -6.2 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2518 | ndk | -1.2 | -2.3 | nucleoside diphosphate kinase (NCBI) | compare |
| b0658 | ybeX | -1.2 | -6.5 | predicteed ion transport (NCBI) | compare |
| b3169 | nusA | -1.2 | -2.3 | transcription elongation factor NusA (NCBI) | compare |
| b2897 | ygfY | -1.2 | -3.3 | hypothetical protein (NCBI) | compare |
| b3727 | pstC | -1.2 | -4.5 | phosphate transporter subunit (NCBI) | compare |
| b3992 | thiF | -1.2 | -6.6 | thiamin biosynthesis, thiazole moiety (VIMSS) | compare |
| b3630 | rfaP | -1.2 | -8.0 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1236 | galU | -1.1 | -4.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3528 | dctA | -1.1 | -7.8 | C4 dicarboxylate/orotate:H+ symporter (DctA) (from data) | compare |
| b4660 | yhiL | -1.1 | -3.1 | no description | compare |
| b4702 | mgtL | -1.1 | -2.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0427 | yajR | -1.1 | -6.0 | putative transport protein (VIMSS) | compare |
| b3237 | argR | -1.1 | -3.8 | arginine repressor (NCBI) | compare |
| b0018 | mokC | -1.1 | -1.3 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b4590 | ybfK | -1.1 | -3.6 | hypothetical protein (RefSeq) | compare |
| b0121 | speE | -1.1 | -4.7 | spermidine synthase (NCBI) | compare |
| b2935 | tktA | -1.0 | -3.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1434 | ydcN | -1.0 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3463 | ftsE | -1.0 | -3.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0688 | pgm | -1.0 | -3.3 | phosphoglucomutase (NCBI) | compare |
| b2330 | yfcB | -1.0 | -2.3 | putative adenine-specific methylase (VIMSS) | compare |
| b1545 | pinQ | -1.0 | -1.4 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1187 | fadR | -1.0 | -4.6 | fatty acid metabolism regulator (NCBI) | compare |
| b3247 | cafA | -1.0 | -7.1 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b3631 | rfaG | -1.0 | -8.4 | glucosyltransferase I (NCBI) | compare |
| b3465 | yhhF | -1.0 | -3.6 | predicted methyltransferase (NCBI) | compare |
| b4453 | ldrD | -1.0 | -2.3 | toxic polypeptide, small (NCBI) | compare |
| b0676 | nagC | -1.0 | -5.2 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b3183 | obgE | -1.0 | -1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0685 | ybfE | -1.0 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3863 | polA | -1.0 | -1.1 | DNA polymerase I (NCBI) | compare |
| b3164 | pnp | -1.0 | -2.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0450 | glnK | -1.0 | -1.8 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1231 | tyrT | -1.0 | -1.1 | tRNA-Tyr (NCBI) | compare |
| b3842 | rfaH | -0.9 | -3.8 | transcriptional activator RfaH (NCBI) | compare |
| b1865 | nudB | -0.9 | -1.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b4279 | yjhB | -0.9 | -2.9 | putative transport protein (VIMSS) | compare |
| b0167 | glnD | -0.9 | -3.4 | PII uridylyl-transferase (NCBI) | compare |
| b3398 | yrfF | -0.9 | -2.7 | predicted inner membrane protein (NCBI) | compare |
| b4388 | serB | -0.9 | -3.5 | 3-phosphoserine phosphatase (NCBI) | compare |
| b4242 | mgtA | -0.9 | -6.9 | magnesium transporter (NCBI) | compare |
| b1266 | yciV | -0.9 | -2.9 | hypothetical protein (NCBI) | compare |
| b3781 | trxA | -0.9 | -3.0 | thioredoxin 1 (VIMSS) | compare |
| b0390 | aroM | -0.9 | -5.5 | hypothetical protein (NCBI) | compare |