Experiment set1IT059 for Echinicola vietnamensis KMM 6221, DSM 17526

marine broth with Paraquat dichloride 0.25 mg/ml

Group: stress
Media: marine_broth_2216 + Paraquat dichloride (0.25 mg/ml)
Culturing: Cola_ML5, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
Growth: about 4.2 generations
By: Adam on 29-Mar-17
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 1728 C3

Specific Phenotypes

For 11 genes in this experiment

For stress Paraquat dichloride in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Paraquat dichloride across organisms

SEED Subsystems

Subsystem	#Specific
Glycerol and Glycerol-3-phosphate Uptake and Utilization	2
Biflavanoid biosynthesis	1
DNA repair, bacterial MutL-MutS system	1
Proteasome bacterial	1
Proteolysis in bacteria, ATP-dependent	1
Tannin biosynthesis	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Flavonoid biosynthesis
• Biosynthesis of phenylpropanoids

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
leucopelargonidin and leucocyanidin biosynthesis	4	2	2
leucodelphinidin biosynthesis	5	1	1