Experiment set1IT058 for Rhizobium sp. OAE497

Compare to:

L-Threonine carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18575 -6.9 -4.8 SIS domain-containing protein compare
ABIE40_RS18590 -6.9 -4.8 homoserine O-succinyltransferase compare
ABIE40_RS19355 -6.9 -4.7 thioredoxin compare
ABIE40_RS09155 -6.7 -4.7 DUF934 domain-containing protein compare
ABIE40_RS11950 -6.5 -4.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS02340 -6.3 -9.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18380 -6.2 -11.2 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS17525 -6.1 -3.4 lipoprotein compare
ABIE40_RS19050 -6.0 -10.0 3-isopropylmalate dehydrogenase compare
ABIE40_RS13330 -5.9 -9.9 2-isopropylmalate synthase compare
ABIE40_RS00245 -5.9 -10.7 prephenate dehydratase compare
ABIE40_RS19040 -5.9 -5.7 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS18775 -5.8 -10.5 pyruvate carboxylase compare
ABIE40_RS09095 -5.7 -3.9 PAS domain-containing sensor histidine kinase compare
ABIE40_RS09150 -5.6 -16.5 nitrite/sulfite reductase compare
ABIE40_RS06555 -5.6 -3.2 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS17020 -5.5 -10.0 sugar-binding transcriptional regulator compare
ABIE40_RS09545 -5.4 -3.5 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.4 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.3 -3.7 histidinol-phosphatase compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.2 -3.6 histidinol dehydrogenase compare
ABIE40_RS20460 -5.2 -3.6 precorrin-3B synthase compare
ABIE40_RS06730 -5.2 -5.0 riboflavin synthase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS02325 -5.1 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS10725 -5.1 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS16655 -5.1 -6.1 creatininase family protein compare
ABIE40_RS03660 -5.1 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19435 -5.1 -2.8 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS11150 -4.9 -6.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS10720 -4.9 -3.2 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS11105 -4.8 -3.3 cobyrinate a,c-diamide synthase compare
ABIE40_RS11175 -4.7 -3.3 cobyric acid synthase compare
ABIE40_RS19440 -4.7 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS06930 -4.7 -3.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19330 -4.7 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS09725 -4.7 -3.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS06560 -4.6 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS10180 -4.6 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS13410 -4.6 -3.2 anthranilate synthase compare
ABIE40_RS20440 -4.6 -3.2 cobalt-precorrin-6A reductase compare
ABIE40_RS17650 -4.6 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS20435 -4.5 -3.1 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS18920 -4.5 -5.7 glutamate 5-kinase compare
ABIE40_RS11165 -4.5 -3.0 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS06270 -4.5 -6.2 amidophosphoribosyltransferase compare
ABIE40_RS19460 -4.5 -6.8 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS08635 -4.5 -11.9 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS11495 -4.5 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS02320 -4.5 -3.1 aspartate aminotransferase family protein compare
ABIE40_RS18925 -4.4 -5.3 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS09660 -4.4 -14.0 AI-2E family transporter compare
ABIE40_RS01930 -4.4 -2.4 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS09140 -4.4 -13.0 siroheme synthase CysG compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS11095 -4.3 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20455 -4.2 -2.3 precorrin-8X methylmutase compare
ABIE40_RS20450 -4.2 -4.1 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS00930 -4.2 -5.7 ABC transporter permease compare
ABIE40_RS20430 -4.2 -2.9 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS19130 -4.1 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS09360 -4.1 -4.9 excinuclease ABC subunit UvrA compare
ABIE40_RS14980 -4.1 -4.0 glycoside hydrolase family 16 protein compare
ABIE40_RS08140 -4.1 -15.2 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS20465 -4.0 -2.8 precorrin-6A synthase (deacetylating) compare
ABIE40_RS14985 -4.0 -2.5 glycosyltransferase compare
ABIE40_RS03405 -3.9 -2.7 anti-sigma factor compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS11155 -3.9 -6.5 cobaltochelatase subunit CobN compare
ABIE40_RS06050 -3.9 -5.3 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS18570 -3.9 -13.9 N-acetylglucosamine-6-phosphate deacetylase compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS12135 -3.9 -2.7 methionine synthase compare
ABIE40_RS15345 -3.9 -9.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS12925 -3.8 -12.0 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS14030 -3.8 -8.0 ATP-binding cassette domain-containing protein compare
ABIE40_RS17645 -3.8 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS16070 -3.8 -4.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS16170 -3.7 -3.6 DUF882 domain-containing protein compare
ABIE40_RS19480 -3.7 -2.5 DUF1402 family protein compare
ABIE40_RS08425 -3.6 -3.4 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS14025 -3.6 -13.7 sugar ABC transporter permease compare
ABIE40_RS08645 -3.5 -7.4 LL-diaminopimelate aminotransferase compare
ABIE40_RS05430 -3.5 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS17590 -3.4 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10345 -3.3 -6.6 RNA polymerase-binding protein DksA compare
ABIE40_RS00725 -3.3 -5.0 DNA cytosine methyltransferase compare
ABIE40_RS10155 -3.3 -2.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS00935 -3.3 -6.3 ABC transporter substrate-binding protein compare
ABIE40_RS00580 -3.3 -3.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS20445 -3.3 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS14020 -3.2 -14.7 D-xylose ABC transporter substrate-binding protein compare
ABIE40_RS10390 -3.2 -3.1 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS18055 -3.1 -4.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS10200 -3.1 -2.1 Grx4 family monothiol glutaredoxin compare
ABIE40_RS09090 -3.1 -8.6 nitrogen regulation protein NR(I) compare
ABIE40_RS06725 -3.1 -5.5 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS14990 -3.1 -10.5 glycosyltransferase family 2 protein compare
ABIE40_RS03190 -3.0 -6.0 phosphogluconate dehydratase compare
ABIE40_RS19385 -3.0 -7.7 adenosylhomocysteinase compare
ABIE40_RS08600 -2.9 -10.0 trigger factor compare
ABIE40_RS06720 -2.9 -2.4 transcriptional regulator NrdR compare
ABIE40_RS08935 -2.9 -3.6 RIP metalloprotease RseP compare
ABIE40_RS07740 -2.7 -2.9 elongation factor Tu compare
ABIE40_RS02580 -2.7 -16.9 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS30655 -2.7 -1.9 hypothetical protein compare
ABIE40_RS01765 -2.7 -6.5 [protein-PII] uridylyltransferase compare
ABIE40_RS18580 -2.6 -2.4 GntR family transcriptional regulator compare
ABIE40_RS03485 -2.6 -11.3 MAPEG family protein compare
ABIE40_RS20905 -2.5 -7.4 IclR family transcriptional regulator compare
ABIE40_RS19455 -2.5 -1.8 DUF2628 domain-containing protein compare
ABIE40_RS04465 -2.5 -12.4 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS14955 -2.5 -9.6 sugar transferase compare
ABIE40_RS04215 -2.5 -3.2 sensor domain-containing phosphodiesterase compare
ABIE40_RS04475 -2.5 -13.4 phosphoadenylyl-sulfate reductase compare
ABIE40_RS09540 -2.5 -5.8 peptidylprolyl isomerase compare
ABIE40_RS18880 -2.5 -13.2 UDP-glucose 4-epimerase GalE compare
ABIE40_RS04070 -2.5 -6.1 heme o synthase compare
ABIE40_RS03155 -2.4 -12.3 substrate-binding domain-containing protein compare
ABIE40_RS06710 -2.4 -3.3 L,D-transpeptidase family protein compare
ABIE40_RS11960 -2.4 -1.6 energy-dependent translational throttle protein EttA compare
ABIE40_RS09720 -2.4 -4.1 GTP cyclohydrolase I FolE compare
ABIE40_RS12360 -2.4 -9.5 DUF5131 family protein compare
ABIE40_RS00340 -2.3 -2.9 30S ribosome-binding factor RbfA compare
ABIE40_RS13130 -2.3 -7.2 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS11060 -2.3 -4.2 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS04470 -2.2 -12.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS05685 -2.2 -10.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS19360 -2.2 -4.5 double-strand break repair helicase AddA compare
ABIE40_RS28785 -2.2 -2.1 ABC-three component system middle component 1 compare
ABIE40_RS18125 -2.2 -5.7 translational GTPase TypA compare
ABIE40_RS07475 -2.1 -2.2 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS28815 -2.1 -5.6 GNAT family N-acetyltransferase compare
ABIE40_RS08970 -2.1 -7.8 citrate synthase compare
ABIE40_RS05680 -2.1 -5.3 cytochrome c maturation protein CcmE compare
ABIE40_RS01355 -2.1 -8.2 phospholipid N-methyltransferase PmtA compare
ABIE40_RS12845 -2.0 -3.1 glycosyltransferase family 4 protein compare
ABIE40_RS14455 -2.0 -3.3 NepR family anti-sigma factor compare
ABIE40_RS01705 -2.0 -7.6 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS00490 -2.0 -9.0 DNA polymerase I compare
ABIE40_RS19700 -2.0 -3.4 MBL fold metallo-hydrolase compare
ABIE40_RS06220 -2.0 -10.7 citramalate synthase compare
ABIE40_RS18285 -1.9 -5.0 heme exporter protein CcmB compare
ABIE40_RS09950 -1.9 -11.3 aminomethyl-transferring glycine dehydrogenase compare
ABIE40_RS15920 -1.9 -0.9 50S ribosomal protein L31 compare
ABIE40_RS16490 -1.9 -8.4 glycogen synthase GlgA compare
ABIE40_RS13370 -1.9 -7.7 CDF family cation efflux transporter EmfA compare
ABIE40_RS18720 -1.9 -1.8 polyprenyl synthetase family protein compare
ABIE40_RS04065 -1.9 -9.2 cytochrome c oxidase subunit I compare
ABIE40_RS13120 -1.9 -7.3 cytochrome c1 compare
ABIE40_RS19260 -1.9 -2.5 DNA polymerase III subunit epsilon compare
ABIE40_RS00235 -1.8 -5.0 cytochrome c family protein compare
ABIE40_RS02585 -1.8 -9.7 acetyl-CoA C-acetyltransferase compare
ABIE40_RS10415 -1.8 -6.0 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS11490 -1.8 -5.6 acetolactate synthase small subunit compare
ABIE40_RS11900 -1.7 -5.9 N-acetylmuramoyl-L-alanine amidase compare
ABIE40_RS05665 -1.7 -3.9 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS10425 -1.7 -5.0 ABC transporter ATP-binding protein compare
ABIE40_RS08865 -1.7 -6.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS09940 -1.7 -7.6 glycine cleavage system aminomethyltransferase GcvT compare
ABIE40_RS16210 -1.7 -7.3 homospermidine synthase compare
ABIE40_RS04060 -1.7 -8.3 cytochrome c oxidase subunit II compare
ABIE40_RS02590 -1.7 -9.0 FAD-dependent oxidoreductase compare
ABIE40_RS09945 -1.7 -6.4 glycine cleavage system protein GcvH compare
ABIE40_RS13125 -1.7 -9.5 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS01055 -1.7 -5.0 translation elongation factor 4 compare
ABIE40_RS22300 -1.7 -4.2 superoxide dismutase compare
ABIE40_RS02345 -1.7 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS16570 -1.7 -3.2 tetratricopeptide repeat protein compare
ABIE40_RS18300 -1.6 -7.8 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS10430 -1.6 -7.6 MlaE family lipid ABC transporter permease subunit compare
ABIE40_RS06265 -1.6 -1.3 SDR family NAD(P)-dependent oxidoreductase compare
ABIE40_RS18640 -1.6 -6.9 M48 family metalloprotease compare
ABIE40_RS09145 -1.6 -3.2 DUF2849 domain-containing protein compare
ABIE40_RS18290 -1.6 -8.0 heme ABC transporter permease compare
ABIE40_RS11530 -1.6 -7.3 protease modulator HflC compare
ABIE40_RS15455 -1.6 -2.0 histidine phosphatase family protein compare
ABIE40_RS00925 -1.6 -4.2 ABC transporter permease compare
ABIE40_RS04080 -1.5 -7.4 cytochrome c oxidase assembly protein compare
ABIE40_RS10130 -1.5 -2.1 alpha/beta hydrolase compare
ABIE40_RS17600 -1.5 -4.0 class I SAM-dependent methyltransferase compare
ABIE40_RS19365 -1.5 -2.5 double-strand break repair protein AddB compare
ABIE40_RS19395 -1.5 -2.3 PTS sugar transporter subunit IIA compare
ABIE40_RS09085 -1.5 -4.8 nitrogen regulation protein NR(II) compare
ABIE40_RS18685 -1.5 -3.4 beta-ketoacyl-ACP reductase compare
ABIE40_RS08980 -1.5 -4.1 transcriptional repressor LexA compare
ABIE40_RS00960 -1.5 -3.6 formyltetrahydrofolate deformylase compare
ABIE40_RS06915 -1.5 -7.6 COX15/CtaA family protein compare
ABIE40_RS19375 -1.4 -4.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS06775 -1.4 -2.0 DUF177 domain-containing protein compare
ABIE40_RS18735 -1.4 -3.8 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11875 -1.4 -1.3 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS17015 -1.4 -5.5 sugar ABC transporter substrate-binding protein compare
ABIE40_RS05155 -1.4 -3.0 DUF5330 domain-containing protein compare
ABIE40_RS05670 -1.4 -4.5 membrane protein compare
ABIE40_RS17510 -1.4 -7.7 3-hydroxybutyryl-CoA dehydrogenase compare
ABIE40_RS27255 -1.4 -1.6 hypothetical protein compare
ABIE40_RS08500 -1.4 -0.8 preprotein translocase subunit YajC compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source L-Threonine in Rhizobium sp. OAE497

For carbon source L-Threonine across organisms