Experiment set1IT058 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Thallium(I) acetate 0.001 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
CA264_07335 +5.3 36.7 transcriptional regulator conserved
CA264_06085 +5.2 30.4 hypothetical protein compare
CA264_07330 +5.1 41.8 hypothetical protein compare
CA264_07325 +4.6 20.9 YfcE family phosphodiesterase compare
CA264_06090 +4.3 13.6 hypothetical protein compare
CA264_19055 +4.2 22.5 epimerase compare
CA264_06600 +4.2 25.1 glycosyltransferase compare
CA264_20055 +4.1 15.0 peptidase M41 compare
CA264_12325 +4.0 29.4 polysaccharide biosynthesis protein compare
CA264_20440 +4.0 5.6 thiamine biosynthesis protein ThiS compare
CA264_05385 +4.0 23.3 hypothetical protein compare
CA264_16340 +3.9 25.6 hypothetical protein compare
CA264_14450 +3.9 20.2 endonuclease/exonuclease/phosphatase compare
CA264_11065 +3.8 14.2 hypothetical protein compare
CA264_12345 +3.7 15.6 lipid carrier--UDP-N-acetylgalactosaminyltransferase compare
CA264_19090 +3.7 10.5 hypothetical protein compare
CA264_01065 +3.7 7.2 MarR family transcriptional regulator compare
CA264_14550 +3.6 34.4 cell surface protein SprA compare
CA264_08105 +3.6 20.1 NupC/NupG family nucleoside CNT transporter compare
CA264_13100 +3.6 10.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
CA264_15215 +3.6 17.9 hypothetical protein compare
CA264_15165 +3.6 17.3 flagellar motor protein MotA compare
CA264_19885 +3.6 22.3 uridine kinase compare
CA264_15170 +3.5 23.6 biopolymer transporter ExbD compare
CA264_16410 +3.5 30.8 hypothetical protein compare
CA264_12310 +3.5 8.5 NifU family protein compare
CA264_14635 +3.5 26.6 hypothetical protein compare
CA264_19920 +3.4 17.5 alanine glycine permease compare
CA264_17675 +3.4 20.5 Fe-S oxidoreductase compare
CA264_20110 +3.4 17.6 DNA helicase RecQ compare
CA264_19925 +3.3 23.1 peptidyl-prolyl cis-trans isomerase compare
CA264_17680 +3.3 16.5 CoB--CoM heterodisulfide reductase compare
CA264_00455 +3.3 22.6 PorT-like protein compare
CA264_18675 +3.2 4.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
CA264_18665 +3.2 17.4 prenyltransferase compare
CA264_07020 +3.2 18.7 phosphatidylglycerophosphatase A compare
CA264_15230 +3.1 19.2 hypothetical protein compare
CA264_14455 +3.1 7.3 ribosome maturation factor compare
CA264_13080 +3.1 10.0 aminodeoxychorismate lyase compare
CA264_11010 +3.1 28.4 hypothetical protein compare
CA264_00660 +3.0 25.3 hypothetical protein compare
CA264_03715 +3.0 13.0 DUF983 domain-containing protein compare
CA264_19760 +3.0 10.2 hypothetical protein compare
CA264_01370 +3.0 28.6 hypothetical protein compare
CA264_13340 +2.9 13.2 iron-sulfur cluster assembly accessory protein compare
CA264_03910 +2.9 20.0 family 2 glycosyl transferase compare
CA264_19615 +2.9 14.5 hypothetical protein compare
CA264_15175 +2.9 5.0 biopolymer transporter ExbD compare
CA264_03100 +2.9 25.0 Xaa-Pro aminopeptidase compare
CA264_04820 +2.9 19.3 deoxyhypusine synthase compare
CA264_16680 +2.9 23.8 hypothetical protein compare
CA264_14765 +2.8 23.2 hypothetical protein compare
CA264_05275 +2.8 11.4 MFS transporter compare
CA264_03905 +2.8 11.6 polysaccharide deacetylase family protein compare
CA264_17650 +2.8 15.4 geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase compare
CA264_00015 +2.8 16.9 hypothetical protein compare
CA264_17050 +2.8 26.4 hypothetical protein compare
CA264_06345 +2.8 25.2 hypothetical protein compare
CA264_15520 +2.8 10.0 hypothetical protein compare
CA264_16760 +2.7 21.7 hypothetical protein compare
CA264_18135 +2.7 13.1 ABC transporter ATP-binding protein compare
CA264_17080 +2.7 10.2 rRNA (cytidine-2'-O-)-methyltransferase compare
CA264_14365 +2.7 22.1 radical SAM protein compare
CA264_16625 +2.7 18.0 SAM-dependent methyltransferase compare
CA264_02545 +2.7 4.6 sulfate adenylyltransferase small subunit compare
CA264_14480 +2.7 12.4 large-conductance mechanosensitive channel compare
CA264_06990 +2.7 17.3 PA-phosphatase compare
CA264_11830 +2.7 14.7 acetyl-CoA acetyltransferase compare
CA264_02525 +2.6 10.7 siroheme synthase compare
CA264_05755 +2.6 11.8 hypothetical protein compare
CA264_08320 +2.6 10.2 hypothetical protein compare
CA264_15255 +2.6 17.1 alpha/beta hydrolase compare
CA264_08110 +2.6 18.3 hypothetical protein compare
CA264_06555 +2.6 8.3 hypothetical protein compare
CA264_19450 +2.6 14.4 type I methionyl aminopeptidase compare
CA264_05240 +2.5 15.5 glycerol acyltransferase compare
CA264_18695 +2.5 11.8 glycogen synthase compare
CA264_08940 +2.5 13.0 cysteine synthase B compare
CA264_15235 +2.5 17.5 hypothetical protein compare
CA264_17790 +2.5 14.2 hypothetical protein compare
CA264_05005 +2.5 21.4 colicin receptor compare
CA264_10930 +2.5 11.3 methylglutaconyl-CoA hydratase compare
CA264_20650 +2.5 13.8 diviva domain containing protein compare
CA264_01430 +2.5 12.7 transcriptional repressor compare
CA264_19860 +2.4 10.6 NifU family protein compare
CA264_13905 +2.4 7.9 hybrid sensor histidine kinase/response regulator compare
CA264_01390 +2.4 15.5 iron ABC transporter permease compare
CA264_11015 +2.4 13.5 hypothetical protein compare
CA264_01505 +2.4 11.3 hypothetical protein compare
CA264_20615 +2.4 15.9 N-acetylmuramoyl-L-alanine amidase compare
CA264_00335 +2.4 13.8 dicarboxylate/amino acid:cation symporter compare
CA264_16120 +2.4 11.0 sensor histidine kinase compare
CA264_19770 +2.4 12.5 ATPase compare
CA264_12075 +2.3 15.9 PAS domain S-box protein compare
CA264_04525 +2.3 17.3 DUF2279 domain-containing protein compare
CA264_12440 +2.3 3.9 methionyl-tRNA formyltransferase compare
CA264_07045 +2.3 8.8 TetR family transcriptional regulator compare
CA264_17510 +2.3 11.8 pseudouridylate synthase compare
CA264_10750 +2.3 6.7 SAM-dependent methyltransferase compare
CA264_14200 +2.3 4.7 NADH-quinone oxidoreductase subunit A compare
CA264_18080 +2.3 14.0 hypothetical protein compare
CA264_06610 +2.3 7.4 iron-dependent repressor compare
CA264_19830 +2.3 14.0 hypothetical protein compare
CA264_16935 +2.3 7.1 hypothetical protein compare
CA264_10870 +2.2 4.7 division/cell wall cluster transcriptional repressor MraZ compare
CA264_00725 +2.2 6.9 pyruvate kinase compare
CA264_02540 +2.2 9.8 sulfate adenylyltransferase compare
CA264_16630 +2.2 15.4 DUF58 domain-containing protein compare
CA264_08120 +2.2 15.9 electron transfer flavoprotein subunit alpha compare
CA264_08115 +2.2 10.8 electron transfer flavoprotein subunit alpha compare
CA264_19845 +2.2 9.4 hypothetical protein compare
CA264_05765 +2.2 8.3 cytochrome c oxidase accessory protein CcoG compare
CA264_11130 +2.1 13.5 mechanosensitive ion channel protein MscS compare
CA264_12940 +2.1 11.4 alcohol dehydrogenase compare
CA264_03025 +2.1 10.6 T9SS C-terminal target domain-containing protein compare
CA264_20690 +2.1 17.6 methylmalonyl-CoA mutase compare
CA264_01385 +2.1 17.4 iron ABC transporter substrate-binding protein compare
CA264_09340 +2.1 12.1 hypothetical protein compare
CA264_20030 +2.1 8.6 GNAT family N-acetyltransferase compare
CA264_09185 +2.1 7.7 hypothetical protein compare
CA264_17560 +2.1 14.5 hypothetical protein compare
CA264_19245 +2.0 12.3 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit compare
CA264_01060 +2.0 5.9 hypothetical protein compare
CA264_17110 +2.0 14.2 radical SAM protein compare
CA264_01405 +2.0 14.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
CA264_20040 +2.0 10.1 hypothetical protein compare
CA264_18655 +2.0 8.2 transcriptional repressor compare
CA264_17760 +2.0 14.7 leucine dehydrogenase compare
CA264_19005 +2.0 17.4 SusC/RagA family TonB-linked outer membrane protein compare
CA264_00170 +2.0 6.4 ATP:cob(I)alamin adenosyltransferase compare
CA264_03870 +2.0 10.9 transcription elongation factor GreA compare
CA264_13310 +2.0 17.7 glycosyl hydrolase compare
CA264_00330 +2.0 9.1 hypothetical protein compare
CA264_08780 +2.0 10.8 hypothetical protein compare
CA264_02520 +2.0 15.3 uroporphyrinogen-III C-methyltransferase compare
CA264_20555 +2.0 9.7 6-pyruvoyl tetrahydrobiopterin synthase compare
CA264_07800 +2.0 8.0 hypothetical protein compare
CA264_20695 +2.0 13.4 methylmalonyl-CoA mutase compare
CA264_11795 +2.0 13.8 aerotolerance regulator BatB compare
CA264_05760 +2.0 9.3 nitrogen fixation protein FixH compare
CA264_14475 +2.0 7.7 hypothetical protein compare
CA264_14290 +1.9 11.3 glycosyl transferase family 2 compare
CA264_18120 +1.9 13.7 ABC transporter compare
CA264_18670 +1.9 7.0 cold-shock protein compare
CA264_19680 +1.9 8.3 two-component sensor histidine kinase compare
CA264_06475 +1.9 3.0 hypothetical protein compare
CA264_07050 +1.9 6.2 serine acetyltransferase compare
CA264_12085 +1.9 1.1 hypothetical protein compare
CA264_21545 +1.9 5.8 AraC family transcriptional regulator compare
CA264_14985 +1.9 9.4 hypothetical protein compare
CA264_02430 +1.9 7.6 glucoamylase compare
CA264_10920 +1.9 13.0 helix-turn-helix-type transcriptional regulator compare
CA264_14965 +1.9 15.6 glycosyltransferase WbuB compare
CA264_09230 +1.9 10.6 hydroxymethylglutaryl-CoA lyase compare
CA264_14515 +1.9 9.9 peptidase M23 compare
CA264_07185 +1.9 10.0 TetR family transcriptional regulator compare
CA264_05250 +1.8 15.8 hypothetical protein compare
CA264_12335 +1.8 10.0 pyridoxal phosphate-dependent aminotransferase compare
CA264_06605 +1.8 9.8 ketoacyl-ACP synthase III compare
CA264_08125 +1.8 9.6 tetratricopeptide repeat protein compare
CA264_15180 +1.8 5.5 energy transducer TonB compare
CA264_18860 +1.8 10.8 TIGR00374 family protein compare
CA264_04655 +1.8 10.2 cell division protein compare
CA264_04835 +1.8 11.1 ABC transporter ATP-binding protein compare
CA264_16140 +1.8 10.5 efflux transporter periplasmic adaptor subunit compare
CA264_19150 +1.8 13.6 TonB dependent receptor compare
CA264_07025 +1.7 10.1 inositol-3-phosphate synthase compare
CA264_21305 +1.7 6.1 hypothetical protein compare
CA264_17860 +1.7 8.6 tRNA dihydrouridine synthase DusB compare
CA264_13075 +1.7 5.6 thioesterase compare
CA264_01565 +1.7 7.5 tellurium resistance protein TerC compare
CA264_11800 +1.7 12.7 aerotolerance protein compare
CA264_15045 +1.7 11.7 acetyl-CoA acetyltransferase compare
CA264_04725 +1.7 9.0 Co2+/Mg2+ efflux protein ApaG compare
CA264_04350 +1.7 9.1 alanine dehydrogenase compare
CA264_16115 +1.7 4.5 hypothetical protein compare
CA264_21275 +1.7 3.2 hypothetical protein compare
CA264_06590 +1.7 10.0 3-hydroxybutyryl-CoA dehydrogenase compare
CA264_14180 +1.7 7.5 transcriptional regulator compare
CA264_04285 +1.7 7.9 hypothetical protein compare
CA264_00325 +1.7 8.7 hypothetical protein compare
CA264_01665 +1.7 7.1 phenylalanine 4-monooxygenase compare
CA264_01995 +1.7 11.9 SH3 domain-containing protein compare
CA264_06395 +1.6 9.4 DUF58 domain-containing protein compare
CA264_15050 +1.6 14.4 3-hydroxyacyl-CoA dehydrogenase compare
CA264_03020 +1.6 8.6 hypothetical protein compare
CA264_16130 +1.6 7.6 TetR family transcriptional regulator compare
CA264_19730 +1.6 13.4 peptidylprolyl isomerase compare
CA264_12625 +1.6 2.1 RDD family protein compare
CA264_20060 +1.6 4.5 ribosome silencing factor RsfS compare
CA264_07005 +1.6 9.4 CDP-diacylglycerol--inositol 3-phosphatidyltransferase compare
CA264_09285 +1.6 7.4 anti-anti-sigma factor compare
CA264_17660 +1.6 5.9 hypothetical protein compare
CA264_18040 +1.5 10.1 kynurenine 3-monooxygenase compare
CA264_06460 +1.5 6.1 NUDIX domain-containing protein compare
CA264_06410 +1.5 9.1 YggS family pyridoxal phosphate enzyme compare
CA264_20635 +1.5 2.8 thioredoxin family protein compare
CA264_16145 +1.5 9.1 copper transporter compare
CA264_03890 +1.5 6.8 family 2 glycosyl transferase compare
CA264_17845 +1.5 8.1 GNAT family N-acetyltransferase compare


Specific Phenotypes

For 48 genes in this experiment

For stress Thallium(I) acetate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Thallium(I) acetate across organisms