Experiment set1IT057 for Rhizobium sp. OAE497

Compare to:

L-Aspartic Acid carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18920 -6.8 -4.7 glutamate 5-kinase compare
ABIE40_RS02340 -6.7 -4.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18380 -6.5 -7.7 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS18590 -6.4 -9.9 homoserine O-succinyltransferase compare
ABIE40_RS11950 -6.4 -4.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS00245 -6.0 -9.3 prephenate dehydratase compare
ABIE40_RS17525 -6.0 -3.3 lipoprotein compare
ABIE40_RS13330 -5.9 -8.1 2-isopropylmalate synthase compare
ABIE40_RS18775 -5.6 -12.6 pyruvate carboxylase compare
ABIE40_RS19050 -5.6 -10.5 3-isopropylmalate dehydrogenase compare
ABIE40_RS06555 -5.5 -3.1 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09545 -5.3 -3.4 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.3 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.2 -3.6 histidinol-phosphatase compare
ABIE40_RS03665 -5.1 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS02725 -5.1 -3.5 histidinol dehydrogenase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS19435 -5.0 -2.8 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS03660 -5.0 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS10725 -5.0 -3.4 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS02325 -5.0 -3.4 ornithine carbamoyltransferase compare
ABIE40_RS19040 -4.9 -8.8 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS19460 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS20450 -4.8 -3.3 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS10720 -4.7 -3.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19440 -4.6 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.6 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS06930 -4.6 -3.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS11150 -4.6 -7.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS10180 -4.5 -3.1 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS17650 -4.5 -3.1 cobaltochelatase subunit CobS compare
ABIE40_RS13410 -4.5 -3.1 anthranilate synthase compare
ABIE40_RS09095 -4.5 -5.3 PAS domain-containing sensor histidine kinase compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS09360 -4.4 -3.0 excinuclease ABC subunit UvrA compare
ABIE40_RS11165 -4.4 -2.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS11495 -4.4 -3.0 acetolactate synthase 3 large subunit compare
ABIE40_RS09090 -4.3 -5.9 nitrogen regulation protein NR(I) compare
ABIE40_RS10345 -4.3 -4.2 RNA polymerase-binding protein DksA compare
ABIE40_RS02320 -4.3 -3.0 aspartate aminotransferase family protein compare
ABIE40_RS11105 -4.3 -5.9 cobyrinate a,c-diamide synthase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS17595 -4.3 -2.9 histidinol-phosphate transaminase compare
ABIE40_RS09725 -4.2 -4.1 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS11095 -4.2 -2.9 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20455 -4.1 -2.3 precorrin-8X methylmutase compare
ABIE40_RS06270 -4.1 -7.9 amidophosphoribosyltransferase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS06560 -4.1 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS08425 -4.1 -2.8 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS18925 -4.1 -6.2 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS11175 -4.0 -6.0 cobyric acid synthase compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS14985 -3.9 -2.5 glycosyltransferase compare
ABIE40_RS05660 -3.9 -3.7 response regulator transcription factor compare
ABIE40_RS08005 -3.8 -2.6 dihydroxy-acid dehydratase compare
ABIE40_RS19445 -3.8 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS03405 -3.8 -2.6 anti-sigma factor compare
ABIE40_RS12845 -3.8 -5.1 glycosyltransferase family 4 protein compare
ABIE40_RS17645 -3.8 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS12135 -3.7 -2.6 methionine synthase compare
ABIE40_RS14980 -3.7 -4.4 glycoside hydrolase family 16 protein compare
ABIE40_RS16070 -3.7 -4.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS14990 -3.7 -13.1 glycosyltransferase family 2 protein compare
ABIE40_RS17565 -3.7 -3.4 ABC transporter permease compare
ABIE40_RS20430 -3.6 -3.5 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS02345 -3.6 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
ABIE40_RS05430 -3.5 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS14955 -3.4 -12.3 sugar transferase compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS21360 -3.3 -12.6 NAD(P)-dependent alcohol dehydrogenase compare
ABIE40_RS08635 -3.3 -13.6 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10155 -3.2 -2.0 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS20445 -3.2 -1.5 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS08970 -3.2 -9.3 citrate synthase compare
ABIE40_RS11155 -3.1 -8.3 cobaltochelatase subunit CobN compare
ABIE40_RS22300 -3.1 -5.9 superoxide dismutase compare
ABIE40_RS19355 -3.1 -3.4 thioredoxin compare
ABIE40_RS01765 -3.1 -6.1 [protein-PII] uridylyltransferase compare
ABIE40_RS05670 -3.0 -6.6 membrane protein compare
ABIE40_RS00580 -3.0 -3.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS06050 -3.0 -7.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS00725 -3.0 -5.6 DNA cytosine methyltransferase compare
ABIE40_RS24640 -3.0 -15.0 NAD(P)-dependent alcohol dehydrogenase compare
ABIE40_RS16660 -2.9 -3.5 GTP-binding protein compare
ABIE40_RS09150 -2.8 -12.2 nitrite/sulfite reductase compare
ABIE40_RS21375 -2.8 -12.9 sugar ABC transporter substrate-binding protein compare
ABIE40_RS30400 -2.8 -3.7 sulfocyanin-like copper-binding protein compare
ABIE40_RS18880 -2.7 -13.5 UDP-glucose 4-epimerase GalE compare
ABIE40_RS09155 -2.7 -4.5 DUF934 domain-containing protein compare
ABIE40_RS21380 -2.7 -13.2 AraC family transcriptional regulator compare
ABIE40_RS18640 -2.7 -10.8 M48 family metalloprotease compare
ABIE40_RS19615 -2.7 -2.1 DUF1109 domain-containing protein compare
ABIE40_RS03190 -2.6 -5.3 phosphogluconate dehydratase compare
ABIE40_RS19365 -2.6 -3.5 double-strand break repair protein AddB compare
ABIE40_RS06730 -2.6 -5.6 riboflavin synthase compare
ABIE40_RS12925 -2.6 -10.2 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS18055 -2.5 -4.5 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS13245 -2.5 -1.8 CoA pyrophosphatase compare
ABIE40_RS14850 -2.5 -8.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS19455 -2.5 -1.7 DUF2628 domain-containing protein compare
ABIE40_RS09170 -2.4 -4.7 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS05665 -2.3 -3.1 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS27295 -2.3 -1.7 hypothetical protein compare
ABIE40_RS06700 -2.3 -3.5 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS12360 -2.3 -10.6 DUF5131 family protein compare
ABIE40_RS05155 -2.3 -4.3 DUF5330 domain-containing protein compare
ABIE40_RS06720 -2.2 -2.1 transcriptional regulator NrdR compare
ABIE40_RS22100 -2.0 -1.6 helix-turn-helix domain-containing protein compare
ABIE40_RS19260 -2.0 -2.9 DNA polymerase III subunit epsilon compare
ABIE40_RS16170 -1.9 -2.4 DUF882 domain-containing protein compare
ABIE40_RS15650 -1.9 -6.7 TIGR00282 family metallophosphoesterase compare
ABIE40_RS19375 -1.9 -5.2 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
ABIE40_RS18735 -1.9 -5.8 TetR/AcrR family transcriptional regulator compare
ABIE40_RS10200 -1.8 -1.6 Grx4 family monothiol glutaredoxin compare
ABIE40_RS19700 -1.8 -3.4 MBL fold metallo-hydrolase compare
ABIE40_RS09720 -1.8 -3.5 GTP cyclohydrolase I FolE compare
ABIE40_RS28420 -1.8 -1.8 30S ribosomal protein S21 compare
ABIE40_RS11960 -1.8 -2.3 energy-dependent translational throttle protein EttA compare
ABIE40_RS24690 -1.8 -1.9 transcriptional regulator NanR compare
ABIE40_RS04475 -1.7 -7.6 phosphoadenylyl-sulfate reductase compare
ABIE40_RS11875 -1.7 -1.8 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS18685 -1.7 -2.9 beta-ketoacyl-ACP reductase compare
ABIE40_RS04070 -1.7 -4.6 heme o synthase compare
ABIE40_RS15905 -1.7 -8.5 MFS transporter compare
ABIE40_RS01930 -1.6 -1.1 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS06770 -1.6 -2.1 ubiquinol-cytochrome C chaperone family protein compare
ABIE40_RS17385 -1.6 -4.7 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
ABIE40_RS22665 -1.6 -2.4 class 1b ribonucleoside-diphosphate reductase subunit beta compare
ABIE40_RS08645 -1.6 -5.1 LL-diaminopimelate aminotransferase compare
ABIE40_RS19360 -1.6 -3.7 double-strand break repair helicase AddA compare
ABIE40_RS15855 -1.6 -2.1 cell division protein ZapA compare
ABIE40_RS09540 -1.6 -4.2 peptidylprolyl isomerase compare
ABIE40_RS03815 -1.6 -1.6 DUF6101 family protein compare
ABIE40_RS09140 -1.6 -7.7 siroheme synthase CysG compare
ABIE40_RS00490 -1.6 -7.4 DNA polymerase I compare
ABIE40_RS04470 -1.6 -9.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS27215 -1.6 -1.1 3'-5' exonuclease compare
ABIE40_RS17010 -1.5 -6.1 sugar ABC transporter permease compare
ABIE40_RS30495 -1.5 -1.0 LuxR C-terminal-related transcriptional regulator compare
ABIE40_RS30700 -1.5 -1.0 hypothetical protein compare
ABIE40_RS15670 -1.5 -3.4 anti-sigma factor compare
ABIE40_RS17005 -1.5 -5.8 carbohydrate ABC transporter permease compare
ABIE40_RS06040 -1.5 -7.2 NYN domain-containing protein compare
ABIE40_RS04215 -1.5 -1.7 sensor domain-containing phosphodiesterase compare
ABIE40_RS09800 -1.4 -4.4 MerR family DNA-binding transcriptional regulator compare
ABIE40_RS04465 -1.4 -8.3 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS15345 -1.4 -5.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS20545 -1.4 -1.9 YbaK/EbsC family protein compare
ABIE40_RS06775 -1.4 -2.1 DUF177 domain-containing protein compare
ABIE40_RS05680 -1.4 -4.2 cytochrome c maturation protein CcmE compare
ABIE40_RS09145 -1.4 -4.7 DUF2849 domain-containing protein compare
ABIE40_RS07320 -1.4 -1.3 DUF3572 domain-containing protein compare
ABIE40_RS08325 -1.4 -2.4 hypothetical protein compare
ABIE40_RS06725 -1.4 -4.0 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS24310 -1.3 -5.6 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS16060 -1.3 -1.5 DUF465 domain-containing protein compare
ABIE40_RS20055 -1.3 -1.3 sugar phosphate isomerase/epimerase compare
ABIE40_RS00450 -1.3 -3.4 molecular chaperone DnaJ compare
ABIE40_RS20635 -1.3 -2.0 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS16210 -1.3 -5.8 homospermidine synthase compare
ABIE40_RS00935 -1.3 -3.8 ABC transporter substrate-binding protein compare
ABIE40_RS10515 -1.3 -5.1 glutathione-disulfide reductase compare
ABIE40_RS18285 -1.3 -3.6 heme exporter protein CcmB compare
ABIE40_RS15745 -1.3 -2.9 Holliday junction branch migration protein RuvA compare
ABIE40_RS00930 -1.2 -4.4 ABC transporter permease compare
ABIE40_RS09510 -1.2 -5.4 septal ring lytic transglycosylase RlpA family protein compare
ABIE40_RS26805 -1.2 -1.1 chaperone modulator CbpM compare
ABIE40_RS09770 -1.2 -3.3 D-alanyl-D-alanine carboxypeptidase compare
ABIE40_RS26395 -1.2 -1.0 hypothetical protein compare
ABIE40_RS01415 -1.2 -1.7 cysteine synthase A compare
ABIE40_RS09875 -1.2 -1.2 YaiI/YqxD family protein compare
ABIE40_RS08865 -1.2 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS29790 -1.2 -3.7 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE40_RS17560 -1.2 -2.6 cell division ATP-binding protein FtsE compare
ABIE40_RS00960 -1.2 -2.8 formyltetrahydrofolate deformylase compare
ABIE40_RS19100 -1.1 -4.9 lytic transglycosylase domain-containing protein compare
ABIE40_RS15590 -1.1 -3.1 tol-pal system protein YbgF compare
ABIE40_RS15755 -1.1 -2.1 PIN domain-containing protein compare
ABIE40_RS18290 -1.1 -6.7 heme ABC transporter permease compare
ABIE40_RS04060 -1.1 -4.9 cytochrome c oxidase subunit II compare
ABIE40_RS04485 -1.1 -1.1 Rrf2 family transcriptional regulator compare
ABIE40_RS18300 -1.1 -5.2 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS13130 -1.1 -5.5 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS05685 -1.1 -5.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS21370 -1.1 -4.0 sugar ABC transporter permease compare
ABIE40_RS05025 -1.1 -2.6 MucR family transcriptional regulator compare
ABIE40_RS09085 -1.1 -2.4 nitrogen regulation protein NR(II) compare
ABIE40_RS18970 -1.1 -1.9 murein hydrolase activator EnvC compare
ABIE40_RS18280 -1.1 -2.6 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS16390 -1.1 -0.8 hypothetical protein compare
ABIE40_RS20215 -1.1 -2.6 glutamine cyclotransferase compare
ABIE40_RS21365 -1.0 -3.4 carbohydrate ABC transporter permease compare
ABIE40_RS24490 -1.0 -1.0 flavin reductase compare
ABIE40_RS21985 -1.0 -2.6 MarR family transcriptional regulator compare
ABIE40_RS10850 -1.0 -2.7 excinuclease ABC subunit UvrB compare
ABIE40_RS26730 -1.0 -1.5 hypothetical protein compare
ABIE40_RS00640 -1.0 -1.7 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source L-Aspartic Acid in Rhizobium sp. OAE497

For carbon source L-Aspartic Acid across organisms