Experiment set1IT056 for Bosea sp. OAE506

Compare to:

D-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
ABIE41_RS04910 -3.6 -2.5 DUF1223 domain-containing protein compare
ABIE41_RS17045 -3.6 -2.6 phosphoribosylglycinamide formyltransferase compare
ABIE41_RS19940 -3.4 -3.0 orotate phosphoribosyltransferase compare
ABIE41_RS03095 -3.4 -2.3 phosphomannomutase compare
ABIE41_RS03570 -3.0 -12.3 DNA polymerase I compare
ABIE41_RS02870 -3.0 -8.4 rhamnan synthesis F family protein compare
ABIE41_RS08365 -2.8 -2.3 metal ABC transporter permease compare
ABIE41_RS16065 -2.7 -1.1 ETC complex I subunit compare
ABIE41_RS22125 -2.6 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE41_RS02880 -2.6 -4.6 glycosyltransferase compare
ABIE41_RS12475 -2.6 -5.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE41_RS16095 -2.6 -2.5 glycosyltransferase family 2 protein compare
ABIE41_RS03545 -2.4 -5.0 cysteine synthase A compare
ABIE41_RS10810 -2.4 -1.4 hypothetical protein compare
ABIE41_RS22775 -2.4 -3.9 tetratricopeptide repeat protein compare
ABIE41_RS07535 -2.2 -2.7 glucose-6-phosphate isomerase compare
ABIE41_RS22475 -2.1 -1.3 hypothetical protein compare
ABIE41_RS10390 -2.0 -3.6 ABC transporter permease compare
ABIE41_RS19130 -2.0 -2.5 single-stranded-DNA-specific exonuclease RecJ compare
ABIE41_RS02845 -2.0 -1.4 glycosyltransferase family 2 protein compare
ABIE41_RS12480 -1.9 -6.1 methionine synthase compare
ABIE41_RS13335 -1.9 -4.1 recombinase RecA compare
ABIE41_RS07230 -1.9 -4.7 cyclic nucleotide-binding domain-containing protein compare
ABIE41_RS15200 -1.8 -1.5 hypothetical protein compare
ABIE41_RS17745 -1.8 -2.6 endolytic transglycosylase MltG compare
ABIE41_RS04950 -1.8 -0.9 3-hydroxyacyl-ACP dehydratase FabZ family protein compare
ABIE41_RS03860 -1.8 -3.0 NAD-dependent epimerase/dehydratase family protein compare
ABIE41_RS19165 -1.8 -3.6 homoserine dehydrogenase compare
ABIE41_RS10285 -1.8 -1.9 ChrR family anti-sigma-E factor compare
ABIE41_RS13460 -1.8 -2.5 RNA polymerase-binding protein DksA compare
ABIE41_RS19890 -1.7 -4.0 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE41_RS05000 -1.7 -6.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE41_RS03720 -1.7 -1.0 Flp family type IVb pilin compare
ABIE41_RS22480 -1.7 -3.3 superoxide dismutase compare
ABIE41_RS21585 -1.7 -1.5 hypothetical protein compare
ABIE41_RS16805 -1.7 -1.7 CinA family protein compare
ABIE41_RS07210 -1.7 -9.0 ABC transporter permease compare
ABIE41_RS10400 -1.7 -1.5 ABC transporter ATP-binding protein compare
ABIE41_RS24040 -1.7 -9.7 EAL domain-containing protein compare
ABIE41_RS12895 -1.7 -1.7 aspartate/glutamate racemase family protein compare
ABIE41_RS19185 -1.6 -9.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE41_RS05885 -1.6 -1.7 nitrile hydratase accessory protein compare
ABIE41_RS07215 -1.6 -11.0 ABC transporter permease compare
ABIE41_RS05095 -1.6 -6.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE41_RS07220 -1.6 -12.4 dipeptide ABC transporter ATP-binding protein compare
ABIE41_RS05115 -1.6 -2.5 DUF1674 domain-containing protein compare
ABIE41_RS08370 -1.6 -1.4 metal ABC transporter permease compare
ABIE41_RS23765 -1.6 -7.7 histidinol-phosphate transaminase compare
ABIE41_RS14220 -1.6 -5.7 heavy metal translocating P-type ATPase compare
ABIE41_RS09245 -1.5 -3.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE41_RS03955 -1.5 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE41_RS12065 -1.5 -1.4 methyl-accepting chemotaxis protein compare
ABIE41_RS06100 -1.5 -3.1 site-specific tyrosine recombinase XerD compare
ABIE41_RS16790 -1.5 -2.5 ATP-binding protein compare
ABIE41_RS23945 -1.5 -5.6 prephenate dehydratase compare
ABIE41_RS15740 -1.5 -2.3 triose-phosphate isomerase compare
ABIE41_RS08565 -1.5 -3.7 glutamate synthase large subunit compare
ABIE41_RS07150 -1.5 -4.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE41_RS24015 -1.5 -6.5 histidinol dehydrogenase compare
ABIE41_RS03815 -1.4 -4.4 phosphoribosyl-ATP diphosphatase compare
ABIE41_RS19570 -1.4 -1.9 hypothetical protein compare
ABIE41_RS23005 -1.3 -2.7 YqgE/AlgH family protein compare
ABIE41_RS08305 -1.3 -2.8 homospermidine synthase compare
ABIE41_RS15705 -1.3 -4.0 exodeoxyribonuclease III compare
ABIE41_RS03965 -1.3 -1.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE41_RS02960 -1.3 -5.5 acetyltransferase compare
ABIE41_RS04170 -1.3 -1.5 DNA replication/repair protein RecF compare
ABIE41_RS02020 -1.3 -1.8 hypothetical protein compare
ABIE41_RS23155 -1.3 -3.1 exodeoxyribonuclease VII large subunit compare
ABIE41_RS04230 -1.2 -5.5 AMP nucleosidase compare
ABIE41_RS04680 -1.2 -2.7 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABIE41_RS15355 -1.2 -3.8 sulfate ABC transporter permease subunit CysT compare
ABIE41_RS17740 -1.2 -2.7 YicC/YloC family endoribonuclease compare
ABIE41_RS14045 -1.2 -1.5 phosphoribosyl-AMP cyclohydrolase compare
ABIE41_RS08105 -1.2 -1.4 HlyD family type I secretion periplasmic adaptor subunit compare
ABIE41_RS23985 -1.2 -2.6 ABC transporter ATP-binding protein compare
ABIE41_RS08995 -1.2 -2.6 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABIE41_RS05305 -1.2 -2.3 M48 family metalloprotease compare
ABIE41_RS14710 -1.2 -1.9 RluA family pseudouridine synthase compare
ABIE41_RS23820 -1.2 -2.8 phosphoenolpyruvate--protein phosphotransferase compare
ABIE41_RS09290 -1.2 -1.0 DUF465 domain-containing protein compare
ABIE41_RS00050 -1.2 -3.6 orotidine-5'-phosphate decarboxylase compare
ABIE41_RS19875 -1.2 -3.6 DNA repair protein RecO compare
ABIE41_RS08610 -1.1 -3.4 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE41_RS14875 -1.1 -3.5 pantoate--beta-alanine ligase compare
ABIE41_RS05025 -1.1 -3.6 aldolase/citrate lyase family protein compare
ABIE41_RS05410 -1.1 -0.6 flagellar motor switch protein FliN compare
ABIE41_RS17040 -1.1 -5.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE41_RS04095 -1.1 -3.4 sigma-70 family RNA polymerase sigma factor compare
ABIE41_RS13505 -1.1 -0.7 Spy/CpxP family protein refolding chaperone compare
ABIE41_RS21405 -1.1 -1.7 PfkB family carbohydrate kinase compare
ABIE41_RS05630 -1.1 -2.0 RNA polymerase sigma factor RpoH compare
ABIE41_RS12865 -1.1 -4.0 DegQ family serine endoprotease compare
ABIE41_RS08285 -1.1 -3.0 prolyl-tRNA synthetase associated domain-containing protein compare
ABIE41_RS17795 -1.1 -3.7 alanine racemase compare
ABIE41_RS18555 -1.1 -1.6 hypothetical protein compare
ABIE41_RS20865 -1.1 -1.4 hypothetical protein compare
ABIE41_RS20500 -1.0 -1.4 GntR family transcriptional regulator compare
ABIE41_RS05655 -1.0 -4.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE41_RS11145 -1.0 -4.5 MoxR family ATPase compare
ABIE41_RS11530 -1.0 -2.3 metalloregulator ArsR/SmtB family transcription factor compare
ABIE41_RS04085 -1.0 -2.2 response regulator compare
ABIE41_RS00105 -1.0 -1.3 hypothetical protein compare
ABIE41_RS19855 -1.0 -1.5 DUF2336 domain-containing protein compare
ABIE41_RS04800 -1.0 -4.3 Bax inhibitor-1/YccA family protein compare
ABIE41_RS05625 -1.0 -3.6 DUF2125 domain-containing protein compare
ABIE41_RS21815 -1.0 -1.7 PilZ domain-containing protein compare
ABIE41_RS18700 -1.0 -1.0 hypothetical protein compare
ABIE41_RS02355 -1.0 -0.8 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS00160 -1.0 -1.5 hypothetical protein compare
ABIE41_RS09055 -1.0 -0.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS06120 -1.0 -1.1 YggT family protein compare
ABIE41_RS14450 -1.0 -1.6 elongation factor Tu compare
ABIE41_RS12850 -1.0 -3.8 FtsH protease activity modulator HflK compare
ABIE41_RS11135 -1.0 -5.1 DUF4159 domain-containing protein compare
ABIE41_RS09695 -1.0 -2.0 folate-binding protein YgfZ compare
ABIE41_RS12735 -1.0 -0.7 hypothetical protein compare
ABIE41_RS23090 -1.0 -3.8 glutamate--cysteine ligase compare
ABIE41_RS23775 -1.0 -5.7 homoserine O-acetyltransferase compare
ABIE41_RS11095 -0.9 -4.4 acyltransferase compare
ABIE41_RS04885 -0.9 -1.0 hypothetical protein compare
ABIE41_RS11100 -0.9 -1.1 hypothetical protein compare
ABIE41_RS08720 -0.9 -3.5 acetoacetyl-CoA reductase compare
ABIE41_RS13900 -0.9 -2.3 DUF938 domain-containing protein compare
ABIE41_RS09980 -0.9 -1.9 magnesium protoporphyrin IX methyltransferase compare
ABIE41_RS22440 -0.9 -2.6 PAS domain-containing sensor histidine kinase compare
ABIE41_RS22955 -0.9 -1.2 heme o synthase compare
ABIE41_RS17230 -0.9 -1.1 aspartate carbamoyltransferase catalytic subunit compare
ABIE41_RS15350 -0.9 -4.7 sulfate ABC transporter permease subunit CysW compare
ABIE41_RS03035 -0.9 -5.5 class I SAM-dependent methyltransferase compare
ABIE41_RS03705 -0.9 -1.6 Flp pilus assembly protein CpaB compare
ABIE41_RS16140 -0.9 -0.8 AI-2E family transporter compare
ABIE41_RS23965 -0.9 -1.6 microcin C ABC transporter permease YejB compare
ABIE41_RS23225 -0.9 -1.2 DUF2019 domain-containing protein compare
ABIE41_RS22120 -0.9 -2.7 ATP phosphoribosyltransferase compare
ABIE41_RS14750 -0.9 -0.9 DUF3253 domain-containing protein compare
ABIE41_RS05200 -0.9 -1.0 ATP-binding cassette domain-containing protein compare
ABIE41_RS09270 -0.8 -3.2 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta compare
ABIE41_RS21625 -0.8 -3.6 methylmalonyl-CoA mutase compare
ABIE41_RS16925 -0.8 -0.9 alpha/beta hydrolase compare
ABIE41_RS18260 -0.8 -3.2 preQ(1) synthase compare
ABIE41_RS09445 -0.8 -2.4 5-formyltetrahydrofolate cyclo-ligase compare
ABIE41_RS21385 -0.8 -3.3 urease subunit alpha compare
ABIE41_RS12855 -0.8 -2.6 protease modulator HflC compare
ABIE41_RS08145 -0.8 -2.4 CoA ester lyase compare
ABIE41_RS17825 -0.8 -1.9 tetratricopeptide repeat protein compare
ABIE41_RS22280 -0.8 -1.3 hypothetical protein compare
ABIE41_RS16505 -0.8 -0.6 ABC transporter ATP-binding protein compare
ABIE41_RS03615 -0.8 -2.1 lysylphosphatidylglycerol synthase domain-containing protein compare
ABIE41_RS16855 -0.8 -2.9 hypothetical protein compare
ABIE41_RS15255 -0.8 -1.7 glycosyltransferase compare
ABIE41_RS09465 -0.8 -1.5 sulfite exporter TauE/SafE family protein compare
ABIE41_RS23780 -0.8 -2.0 methionine biosynthesis protein MetW compare
ABIE41_RS17510 -0.8 -1.6 DUF4131 domain-containing protein compare
ABIE41_RS05840 -0.8 -3.6 glucan biosynthesis protein D compare
ABIE41_RS17800 -0.8 -2.3 DNA repair protein RadA compare
ABIE41_RS04110 -0.8 -0.8 hypothetical protein compare
ABIE41_RS21860 -0.8 -2.0 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE41_RS01355 -0.8 -1.2 aldolase/citrate lyase family protein compare
ABIE41_RS11585 -0.8 -1.2 TRAP transporter small permease compare
ABIE41_RS20810 -0.8 -1.5 globin-coupled sensor protein compare
ABIE41_RS05225 -0.8 -1.5 phosphoribosyl-ATP diphosphatase compare
ABIE41_RS18395 -0.8 -0.9 LysR family transcriptional regulator compare
ABIE41_RS15185 -0.8 -1.4 IMP dehydrogenase compare
ABIE41_RS22390 -0.8 -3.1 pyruvate, phosphate dikinase compare
ABIE41_RS22795 -0.8 -2.1 cytochrome d ubiquinol oxidase subunit II compare
ABIE41_RS10385 -0.8 -1.6 ABC transporter substrate-binding protein compare
ABIE41_RS23325 -0.8 -1.6 MerR family DNA-binding transcriptional regulator compare
ABIE41_RS15370 -0.8 -1.4 sulfate adenylyltransferase subunit CysD compare
ABIE41_RS22090 -0.8 -1.7 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE41_RS17480 -0.7 -0.8 hypothetical protein compare
ABIE41_RS19885 -0.7 -0.5 LysR substrate-binding domain-containing protein compare
ABIE41_RS04785 -0.7 -2.5 peroxidase-related enzyme compare
ABIE41_RS02580 -0.7 -3.4 Na/Pi cotransporter family protein compare
ABIE41_RS05740 -0.7 -1.4 hypothetical protein compare
ABIE41_RS08905 -0.7 -1.8 phosphate signaling complex protein PhoU compare
ABIE41_RS20040 -0.7 -1.6 ABC transporter ATP-binding protein compare
ABIE41_RS23770 -0.7 -3.0 chorismate mutase compare
ABIE41_RS08470 -0.7 -1.6 iron response transcriptional regulator IrrA compare
ABIE41_RS11760 -0.7 -0.6 rhodanese-like domain-containing protein compare
ABIE41_RS15360 -0.7 -3.2 sulfate ABC transporter substrate-binding protein compare
ABIE41_RS09280 -0.7 -2.3 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha compare
ABIE41_RS08355 -0.7 -2.0 metal ABC transporter substrate-binding protein compare
ABIE41_RS11400 -0.7 -1.5 MarR family transcriptional regulator compare
ABIE41_RS06340 -0.7 -1.5 LysR family transcriptional regulator compare
ABIE41_RS15835 -0.7 -2.2 extracellular solute-binding protein compare
ABIE41_RS08735 -0.7 -3.1 TIGR02302 family protein compare
ABIE41_RS11350 -0.7 -2.0 hypothetical protein compare
ABIE41_RS16780 -0.7 -2.2 PAS domain-containing sensor histidine kinase compare
ABIE41_RS23385 -0.7 -1.4 DUF3305 domain-containing protein compare
ABIE41_RS19280 -0.7 -1.2 DUF2842 domain-containing protein compare
ABIE41_RS02720 -0.7 -3.4 double-strand break repair protein AddB compare
ABIE41_RS19115 -0.7 -1.9 helix-turn-helix domain-containing protein compare
ABIE41_RS15815 -0.7 -2.7 ATP-dependent DNA helicase RecG compare
ABIE41_RS11160 -0.7 -1.6 DUF6111 family protein compare
ABIE41_RS19545 -0.7 -0.5 hypothetical protein compare
ABIE41_RS07875 -0.7 -0.7 hypothetical protein compare
ABIE41_RS00655 -0.7 -0.9 hypothetical protein compare
ABIE41_RS11140 -0.7 -1.3 DUF58 domain-containing protein compare
ABIE41_RS23825 -0.7 -5.0 trehalose-6-phosphate synthase compare


Specific Phenotypes

None in this experiment

For Bosea sp. OAE506 in carbon source experiments

For carbon source D-Galactose across organisms