Experiment set1IT053 for Magnetospirillum magneticum AMB-1

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carbonsource_all

200 most important genes:

  gene name fitness t score description  
AMB_RS18930 -4.8 -1.3 Flp pilus assembly protein CpaB compare
AMB_RS19790 -4.7 -4.5 NAD(P)-dependent oxidoreductase compare
AMB_RS11640 -3.1 -6.7 UbiX family flavin prenyltransferase compare
AMB_RS16130 -3.1 -6.2 phosphoglycerate dehydrogenase compare
AMB_RS01190 -2.9 -11.2 UbiD family decarboxylase compare
AMB_RS20350 -2.8 -10.7 aspartate 1-decarboxylase compare
AMB_RS22150 -2.8 -2.1 MarR family transcriptional regulator compare
AMB_RS02835 -2.7 -2.9 two-component sensor histidine kinase compare
AMB_RS14200 -2.4 -4.8 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha compare
AMB_RS22490 -2.4 -2.2 YdcF family protein compare
AMB_RS02725 -2.4 -3.3 phospholipid carrier-dependent glycosyltransferase compare
AMB_RS06005 -2.3 -3.1 hypothetical protein compare
AMB_RS23090 -2.2 -6.1 NAD(P)-dependent oxidoreductase compare
AMB_RS19880 -2.2 -3.4 site-specific tyrosine recombinase XerD compare
AMB_RS19545 -2.2 -3.8 elongation factor 4 compare
AMB_RS21265 -2.2 -4.1 c-type cytochrome biogenesis protein CcmI compare
AMB_RS07010 -2.1 -9.1 ATP-dependent helicase compare
AMB_RS10600 -2.1 -3.8 hypothetical protein compare
AMB_RS09990 -2.1 -6.7 hypothetical protein compare
AMB_RS00075 -2.1 -1.4 P-II family nitrogen regulator compare
AMB_RS16340 -2.0 -2.2 penicillin-binding protein 1A compare
AMB_RS18850 -2.0 -2.6 class I poly(R)-hydroxyalkanoic acid synthase compare
AMB_RS03110 -2.0 -2.2 membrane protein compare
AMB_RS10730 -2.0 -2.8 hypothetical protein compare
AMB_RS11740 -2.0 -13.1 ubiquinone-binding protein compare
AMB_RS17335 -2.0 -1.9 N-acyl-L-homoserine lactone synthetase compare
AMB_RS11555 -1.9 -3.0 MBL fold metallo-hydrolase compare
AMB_RS15295 -1.9 -2.2 iron donor protein CyaY compare
AMB_RS21280 -1.9 -3.6 TVP38/TMEM64 family protein compare
AMB_RS21455 -1.8 -6.1 XRE family transcriptional regulator compare
AMB_RS10990 -1.8 -1.9 hypothetical protein compare
AMB_RS22800 -1.8 -3.2 glutathione synthase compare
AMB_RS07865 -1.8 -7.8 ATP-dependent chaperone ClpB compare
AMB_RS01605 -1.8 -2.3 aspartate aminotransferase family protein compare
AMB_RS00010 -1.8 -1.6 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
AMB_RS21535 -1.8 -3.2 cyclic nucleotide-binding domain-containing protein compare
AMB_RS03835 -1.8 -2.0 YicC family protein compare
AMB_RS18370 -1.8 -0.6 hypothetical protein compare
AMB_RS14035 -1.7 -5.4 endopeptidase La compare
AMB_RS03405 -1.6 -1.5 LysR family transcriptional regulator compare
AMB_RS00355 -1.6 -11.3 radical SAM protein compare
AMB_RS16280 -1.6 -3.3 5-formyltetrahydrofolate cyclo-ligase compare
AMB_RS21385 -1.6 -5.1 helix-turn-helix transcriptional regulator compare
AMB_RS02125 -1.5 -2.9 LemA family protein compare
AMB_RS22780 -1.4 -1.6 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
AMB_RS12385 -1.4 -4.7 alanine--glyoxylate aminotransferase family protein compare
AMB_RS17755 -1.4 -1.7 TIGR02453 family protein compare
AMB_RS05435 -1.3 -4.6 ABC transporter permease compare
AMB_RS20585 -1.3 -3.6 DNA-binding protein compare
AMB_RS22710 -1.3 -1.9 MFS transporter compare
AMB_RS05910 -1.3 -2.0 hypothetical protein compare
AMB_RS04325 -1.3 -4.6 TetR/AcrR family transcriptional regulator compare
AMB_RS03510 -1.3 -6.2 flagellin-like protein compare
AMB_RS03135 -1.2 -1.5 NADP-dependent isocitrate dehydrogenase compare
AMB_RS19160 -1.2 -2.7 methyltransferase domain-containing protein compare
AMB_RS03545 -1.2 -1.5 hypothetical protein compare
AMB_RS18590 -1.2 -2.5 glycosyltransferase family 2 protein compare
AMB_RS04185 -1.2 -5.7 IMP dehydrogenase compare
AMB_RS21290 -1.2 -1.7 DUF4139 domain-containing protein compare
AMB_RS00085 -1.2 -1.7 aspartate aminotransferase compare
AMB_RS20770 -1.2 -2.3 TrkH family potassium uptake protein compare
AMB_RS04035 -1.2 -2.5 hypothetical protein compare
AMB_RS07495 -1.2 -1.2 xanthine dehydrogenase compare
AMB_RS22480 -1.2 -1.9 cell division ATP-binding protein FtsE compare
AMB_RS22030 -1.2 -1.5 membrane protein insertion efficiency factor YidD compare
AMB_RS14520 -1.1 -1.9 1,4-beta-N-acetylmuramidase compare
AMB_RS05405 -1.1 -1.2 4Fe-4S dicluster domain-containing protein compare
AMB_RS07240 -1.1 -6.5 PAS domain-containing sensor histidine kinase compare
AMB_RS20065 -1.1 -2.9 hemerythrin compare
AMB_RS21625 -1.1 -0.2 hypothetical protein compare
AMB_RS14240 -1.1 -2.0 hypothetical protein compare
AMB_RS11470 -1.1 -5.4 homospermidine synthase compare
AMB_RS09095 -1.1 -2.7 hypothetical protein compare
AMB_RS12560 -1.1 -2.0 penicillin-insensitive murein endopeptidase compare
AMB_RS14595 -1.1 -3.8 acetoin utilization protein compare
AMB_RS21210 -1.1 -4.8 hydroxyacylglutathione hydrolase compare
AMB_RS21490 -1.0 -2.5 DUF805 domain-containing protein compare
AMB_RS11380 -1.0 -1.8 hemerythrin compare
AMB_RS18915 -1.0 -1.2 Flp family type IVb pilin compare
AMB_RS01150 -1.0 -2.3 hemerythrin compare
AMB_RS14290 -1.0 -4.1 exopolyphosphatase compare
AMB_RS12185 -1.0 -1.3 hypothetical protein compare
AMB_RS02240 -1.0 -1.2 surface lipoprotein compare
AMB_RS17450 -1.0 -1.9 DUF1987 domain-containing protein compare
AMB_RS19255 -1.0 -5.3 excinuclease ABC subunit UvrB compare
AMB_RS14655 -1.0 -3.8 hypothetical protein compare
AMB_RS03725 -1.0 -3.3 DNA helicase II compare
AMB_RS03610 -0.9 -4.0 transcription elongation factor GreA compare
AMB_RS18595 -0.9 -3.2 leucyl aminopeptidase compare
AMB_RS23195 -0.9 -4.3 ABC transporter ATP-binding protein compare
AMB_RS01895 -0.9 -1.4 hypothetical protein compare
AMB_RS23865 -0.9 -1.5 DUF2786 domain-containing protein compare
AMB_RS20015 -0.9 -5.4 exopolyphosphatase compare
AMB_RS18145 -0.9 -3.0 GntR family transcriptional regulator compare
AMB_RS04050 -0.9 -6.1 thiamine pyrophosphate-binding protein compare
AMB_RS07100 -0.9 -2.2 Lrp/AsnC family transcriptional regulator compare
AMB_RS02685 -0.9 -6.2 glutamate synthase large subunit compare
AMB_RS01250 -0.9 -1.6 hypothetical protein compare
AMB_RS04520 -0.9 -2.5 glycine zipper 2TM domain-containing protein compare
AMB_RS11195 -0.9 -1.2 sulfate adenylyltransferase subunit 2 compare
AMB_RS01415 -0.9 -1.2 rhodanese-like domain-containing protein compare
AMB_RS24000 -0.8 -1.8 glycosyltransferase family 1 protein compare
AMB_RS07415 -0.8 -0.6 DUF2946 domain-containing protein compare
AMB_RS13920 -0.8 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
AMB_RS02690 -0.8 -2.3 dihydropyrimidine dehydrogenase subunit A compare
AMB_RS04045 -0.8 -5.0 B12-binding domain-containing radical SAM protein compare
AMB_RS11605 -0.8 -1.6 N-formylglutamate amidohydrolase compare
AMB_RS03855 -0.8 -2.7 cytochrome c compare
AMB_RS07065 -0.8 -4.5 Crp/Fnr family transcriptional regulator compare
AMB_RS13535 -0.8 -2.7 hypothetical protein compare
AMB_RS06660 -0.8 -1.5 hypothetical protein compare
AMB_RS12060 -0.8 -0.5 hypothetical protein compare
AMB_RS00130 -0.8 -2.4 tetratricopeptide repeat protein compare
AMB_RS20665 -0.8 -0.9 class I SAM-dependent methyltransferase compare
AMB_RS21390 -0.8 -1.8 hypothetical protein compare
AMB_RS21170 -0.8 -3.7 adenosine kinase compare
AMB_RS22450 -0.8 -4.9 electron transfer flavoprotein-ubiquinone oxidoreductase compare
AMB_RS04060 -0.8 -4.7 pyridoxal phosphate-dependent aminotransferase compare
AMB_RS20750 -0.8 -2.1 YbaB/EbfC family nucleoid-associated protein compare
AMB_RS04025 -0.8 -1.3 glutathione S-transferase compare
AMB_RS05530 -0.8 -3.7 glycosyltransferase compare
AMB_RS17400 -0.8 -2.9 esterase compare
AMB_RS09520 -0.8 -1.1 hypothetical protein compare
AMB_RS06370 -0.8 -1.6 DNA-binding response regulator compare
AMB_RS17625 -0.7 -4.7 hopanoid biosynthesis associated radical SAM protein HpnJ compare
AMB_RS14525 -0.7 -0.6 xylanase/chitin deacetylase compare
AMB_RS01480 -0.7 -1.9 M48 family peptidase compare
AMB_RS00180 -0.7 -4.0 hypothetical protein compare
AMB_RS13125 -0.7 -1.8 hypothetical protein compare
AMB_RS21710 -0.7 -2.6 hypothetical protein compare
AMB_RS22280 -0.7 -4.2 hypothetical protein compare
AMB_RS05135 -0.7 -2.4 hypothetical protein compare
AMB_RS02340 -0.7 -1.2 nuclease inhibitor protein compare
AMB_RS12355 -0.7 -0.5 ABC transporter ATP-binding protein compare
AMB_RS06995 -0.7 -2.8 fructose-bisphosphatase class II compare
AMB_RS13780 -0.7 -1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
AMB_RS03655 -0.7 -2.2 hypothetical protein compare
AMB_RS22235 -0.7 -1.2 RNase adaptor protein RapZ compare
AMB_RS04575 -0.7 -0.9 DNA-binding response regulator compare
AMB_RS21870 -0.7 -3.3 DUF2189 domain-containing protein compare
AMB_RS03920 -0.7 -1.9 hypothetical protein compare
AMB_RS00120 -0.7 -1.7 YggS family pyridoxal phosphate-dependent enzyme compare
AMB_RS20195 -0.7 -1.5 iron transporter MagA compare
AMB_RS21865 -0.7 -0.8 J domain-containing protein compare
AMB_RS09970 -0.7 -0.6 NAD synthetase compare
AMB_RS09800 -0.7 -1.7 uptake hydrogenase compare
AMB_RS17845 -0.7 -1.8 hypothetical protein compare
AMB_RS20440 -0.6 -1.6 hypothetical protein compare
AMB_RS00850 -0.6 -1.9 LD-carboxypeptidase compare
AMB_RS14345 -0.6 -2.4 adenine phosphoribosyltransferase compare
AMB_RS08360 -0.6 -1.5 hypothetical protein compare
AMB_RS10260 -0.6 -0.9 CBS domain-containing protein compare
AMB_RS06550 -0.6 -1.0 lysophospholipase compare
AMB_RS17290 -0.6 -1.1 hypothetical protein compare
AMB_RS07890 -0.6 -1.5 ferredoxin III, nif-specific compare
AMB_RS16575 -0.6 -1.0 DNA polymerase III subunit epsilon compare
AMB_RS15220 -0.6 -1.1 DUF599 domain-containing protein compare
AMB_RS04910 -0.6 -0.8 hypothetical protein compare
AMB_RS09725 -0.6 -1.4 phage tail assembly chaperone compare
AMB_RS16455 -0.6 -0.8 hypothetical protein compare
AMB_RS17195 -0.6 -1.5 hypothetical protein compare
AMB_RS12410 -0.6 -2.7 excinuclease ABC subunit UvrA compare
AMB_RS03470 -0.6 -2.1 enoyl-CoA hydratase compare
AMB_RS14325 -0.6 -0.9 DUF2066 domain-containing protein compare
AMB_RS17445 -0.6 -1.3 hypothetical protein compare
AMB_RS08220 -0.6 -1.3 hypothetical protein compare
AMB_RS21445 -0.6 -2.8 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha compare
AMB_RS14530 -0.6 -2.0 acyl dehydratase compare
AMB_RS16835 -0.6 -1.7 hypothetical protein compare
AMB_RS12670 -0.6 -1.8 protein-L-isoaspartate O-methyltransferase compare
AMB_RS05755 -0.6 -2.1 hypothetical protein compare
AMB_RS07120 -0.6 -2.3 heme d1 biosynthesis radical SAM protein NirJ compare
AMB_RS18665 -0.6 -2.4 methyl-accepting chemotaxis protein compare
AMB_RS23965 -0.6 -1.5 hypothetical protein compare
AMB_RS20785 -0.6 -1.9 methylmalonyl Co-A mutase-associated GTPase MeaB compare
AMB_RS13430 -0.6 -2.2 molecular chaperone TorD compare
AMB_RS04810 -0.6 -2.1 hypothetical protein compare
AMB_RS17675 -0.6 -1.8 flagella basal body P-ring formation protein FlgA compare
AMB_RS20120 -0.6 -1.3 VOC family protein compare
AMB_RS19240 -0.6 -2.4 UvrABC system protein C compare
AMB_RS03180 -0.6 -1.1 flagellar biosynthetic protein FliQ compare
AMB_RS04280 -0.6 -3.8 polyhydroxyalkanoate synthesis repressor PhaR compare
AMB_RS02695 -0.6 -2.0 undecaprenyl-diphosphatase 1 compare
AMB_RS19210 -0.6 -1.6 hypothetical protein compare
AMB_RS05600 -0.6 -1.5 type III PLP-dependent enzyme compare
AMB_RS07745 -0.6 -1.0 disulfide bond formation protein B compare
AMB_RS20955 -0.6 -0.7 zinc ribbon domain-containing protein compare
AMB_RS04720 -0.6 -1.5 response regulator compare
AMB_RS00455 -0.6 -2.4 KR domain-containing protein compare
AMB_RS06910 -0.6 -1.2 glycosyl transferase compare
AMB_RS06055 -0.6 -2.8 hypothetical protein compare
AMB_RS18160 -0.6 -1.6 ABC transporter ATP-binding protein compare
AMB_RS12970 -0.6 -1.5 flavin reductase compare
AMB_RS00100 -0.6 -1.9 exodeoxyribonuclease III compare
AMB_RS15620 -0.6 -2.0 RluA family pseudouridine synthase compare
AMB_RS06665 -0.5 -1.1 LrgB family protein compare
AMB_RS14060 -0.5 -1.5 methyl-accepting chemotaxis protein compare
AMB_RS17240 -0.5 -1.6 OmpA family protein compare
AMB_RS24270 -0.5 -1.7 phage portal protein compare
AMB_RS22565 -0.5 -4.1 MucR family transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment