Experiment set1IT051 for Agrobacterium fabrum C58

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
Atu2791 -8.3 -5.7 3-isopropylmalate dehydrogenase compare
Atu1687 -8.0 -9.6 anthranilate phosphoribosyltransferase compare
Atu1750 -7.8 -7.1 phosphoribosyl c-AMP cyclohydrolase compare
Atu1140 -7.6 -7.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2289 -7.5 -17.5 anthranilate synthase component I and II compare
Atu3754 -7.4 -4.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1845 -7.4 -7.2 phosphoribosylformylglycinamidine synthase I compare
Atu2709 -7.2 -17.5 3-isopropylmalate dehydratase, large subunit compare
Atu2726 -7.1 -23.1 pyruvate carboxylase compare
Atu0099 -7.0 -13.5 prephenate dehydratase compare
Atu2264 -6.9 -13.3 2-isopropylmalate synthase compare
Atu0537 -6.9 -4.8 histidinol dehydrogenase compare
Atu1850 -6.9 -6.3 phosphoribosylformylglycinamidine synthetase II compare
Atu0678 -6.8 -4.7 histidyl-tRNA synthetase compare
Atu2040 -6.7 -6.6 phosphoserine phosphatase compare
Atu3706 -6.7 -8.0 D-3-phosphoglycerate dehydrogenase compare
Atu2036 -6.6 -17.2 acetolactate synthase III, large subunit compare
Atu1141 -6.5 -8.9 Phosphoribosylglycinamide synthetase compare
Atu2718 -6.4 -9.8 homoserine O-succinyltransferase compare
Atu1688 -6.1 -9.3 indole-3-glycerol-phosphate synthase compare
Atu1075 -6.1 -9.3 amidophosphoribosyltransferase compare
Atu1307 -6.0 -7.2 dihydroorotase compare
Atu3482 -6.0 -12.5 pantoate--beta-alanine ligase compare
Atu0400 -5.9 -5.8 orotate phosphoribosyltransferase compare
Atu0647 -5.9 -4.1 phosphoribosylamine--glycine ligase compare
Atu3707 -5.9 -5.8 phosphoserine aminotransferase compare
Atu0679 -5.9 -7.0 ATP phosphoribosyltransferase compare
Atu0043 -5.8 -4.0 imidazoleglycerol-phosphate dehydratase compare
Atu1205 -5.8 -16.7 threonine dehydratase compare
Atu1588 -5.7 -11.1 homoserine dehydrogenase compare
Atu3885 -5.7 -12.2 inositol monophosphatase compare
Atu0298 -5.7 -6.8 orotidine 5 compare
Atu3755 -5.7 -6.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0039 -5.6 -3.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu0432 -5.6 -8.2 O-succinylhomoserine sulfhydrylase compare
Atu3469 -5.5 -3.8 phosphoglyceromutase compare
Atu2790 -5.3 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu1308 -5.2 -6.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1030 -5.2 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0184 -5.2 -5.0 glucokinase compare
Atu2747 -5.1 -13.2 hypothetical protein compare
Atu1844 -5.1 -4.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu0486 -5.0 -7.4 dihydroorotate dehydrogenase compare
Atu1359 -4.9 -2.0 dnaK deletion suppressor protein compare
Atu2015 -4.7 -16.9 aminotransferase compare
Atu3483 -4.6 -10.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0399 -4.6 -9.3 dihydroorotase compare
Atu0038 -4.5 -6.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3739 -4.1 -4.8 phosphoglycerate kinase compare
Atu1464 -4.1 -11.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu1686 -4.1 -18.7 peptidyl-prolyl cis-trans isomerse D compare
Atu1446 -4.1 -4.8 two component response regulator compare
Atu0422 -4.1 -2.6 ABC transporter, membrane spanning protein compare
Atu0040 -3.9 -2.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0030 -3.9 -2.7 phosphocarrier protein HPr compare
Atu1463 -3.8 -11.5 glycine cleavage system component H compare
Atu3783 -3.8 -18.5 glutamate synthase subunit beta compare
Atu0641 -3.8 -5.0 hypothetical protein compare
Atu2548 -3.7 -20.0 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0017 -3.7 -5.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2650 -3.6 -16.4 glycerol-3-phosphate dehydrogenase compare
Atu1589 -3.5 -7.7 aminotransferase, class I compare
Atu0602 -3.4 -13.0 glutamine synthetase compare
Atu3784 -3.4 -25.7 glutamate synthase large subunit compare
Atu3731 -3.4 -12.6 5-formyltetrahydrofolate cyclo-ligase compare
Atu0185 -3.4 -5.2 methylglyoxal synthase compare
Atu1462 -3.2 -13.9 glycine cleavage system protein P2 compare
Atu1685 -3.1 -2.1 hypothetical protein compare
Atu0598 -3.0 -12.2 phosphogluconate dehydratase compare
Atu0659 -2.9 -7.0 NTP pyrophosphohydrolase, MutT family compare
Atu0421 -2.9 -2.8 ABC transporter, membrane spanning protein compare
Atu0434 -2.8 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0601 -2.8 -14.4 oxidoreductase compare
Atu1456 -2.5 -11.4 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu2155 -2.4 -18.3 methionine synthase compare
Atu3997 -2.4 -16.0 biotin synthetase compare
Atu4075 -2.3 -10.5 glycogen synthase compare
Atu0999 -2.3 -6.9 magnesium transport protein compare
Atu1604 -2.2 -17.3 poly-beta-hydroxybutyrate synthase compare
Atu2684 -2.2 -3.4 hypothetical protein compare
Atu4098 -2.2 -12.1 quinolinate synthetase compare
Atu3999 -2.2 -5.1 dithiobiotin synthetase compare
Atu3763 -2.2 -2.8 hypothetical protein compare
Atu5045 -2.1 -2.6 hypothetical protein compare
Atu3289 -2.1 -6.1 thiamine-phosphate pyrophosphorylase compare
Atu4096 -2.1 -9.1 nicotinate-nucleotide pyrophosphorylase compare
Atu1454 -2.0 -7.6 siroheme synthase compare
Atu2569 -1.9 -13.9 thiamine biosynthesis protein compare
Atu2554 -1.8 -3.1 lysyl-tRNA synthetase compare
Atu4173 -1.8 -4.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu0086 -1.8 -1.8 ribosome-binding factor A compare
Atu3290 -1.8 -9.4 phosphomethylpyrimidine kinase compare
Atu4000 -1.8 -11.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu1021 -1.7 -3.1 outer membrane protein compare
Atu2347 -1.7 -9.0 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu4001 -1.7 -8.5 3-oxoacyl-ACP synthase compare
Atu2832 -1.7 -6.7 tRNA modification GTPase compare
Atu1620 -1.7 -8.8 triosephosphate isomerase compare
Atu1163 -1.7 -2.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3288 -1.6 -9.2 hydroxyethylthiazole kinase compare
Atu0977 -1.6 -3.2 serine protease DO-like protease compare
Atu0912 -1.6 -1.6 Na+/H+ antiporter compare
Atu6098 -1.6 -0.9 transcriptional regulator, HTH family compare
Atu3998 -1.6 -10.0 8-amino-7-oxononanoate synthase compare
Atu4346 -1.6 -5.3 hypothetical protein compare
Atu6114 -1.6 -1.8 hypothetical protein compare
Atu3576 -1.5 -9.9 xylose ABC transporter substrate-binding protein conserved
Atu2205 -1.5 -6.6 transcriptional regulator, MarR family compare
Atu2045 -1.5 -7.1 HFLK protein compare
Atu0723 -1.5 -3.0 FAD dependent oxidoreductase compare
Atu0029 -1.5 -7.2 S-adenosylhomocysteine hydrolase compare
Atu0769 -1.5 -1.4 protoheme IX farnesyltransferase compare
Atu2127 -1.4 -8.9 L-carnitine dehydratase compare
Atu2831 -1.4 -6.0 glucose inhibited division protein A compare
Atu3574 -1.4 -7.5 xylose ABC transporter ATPase compare
Atu4097 -1.4 -7.4 L-aspartate oxidase compare
Atu3575 -1.4 -6.3 xylose ABC transporter permease conserved
Atu0354 -1.4 -3.2 ferric uptake regulator compare
Atu0368 -1.4 -5.3 tRNA pseudouridine synthase I compare
Atu2346 -1.4 -9.7 ABC transporter, membrane spanning protein (sugar) compare
Atu0346 -1.4 -2.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu8115 -1.4 -3.4 Hypothetical Protein compare
Atu6189 -1.4 -1.3 protein secretion chaperone compare
Atu0941 -1.4 -1.4 hypothetical protein compare
Atu0876 -1.4 -2.9 superoxide dismutase compare
Atu2209 -1.4 -3.6 pyrroline-5-carboxylate reductase compare
Atu2682 -1.3 -3.8 hypothetical protein compare
Atu2532 -1.3 -4.9 transcriptional regulator, MarR family compare
Atu0332 -1.3 -7.8 RNA polymerase sigma-54 factor compare
Atu5513 -1.3 -2.1 cold shock protein compare
Atu3910 -1.3 -4.3 LamB/YcsF family protein compare
Atu1748 -1.3 -7.9 NIFU-like protein compare
Atu4711 -1.3 -4.7 two component sensor kinase compare
Atu4677 -1.3 -2.5 hypothetical protein compare
Atu0388 -1.3 -8.1 two component sensor kinase compare
Atu3730 -1.3 -1.6 hypothetical protein compare
Atu0189 -1.2 -3.9 ABC transporter, membrane spanning protein (peptide) compare
Atu2770 -1.2 -6.7 acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis compare
Atu2348 -1.2 -5.6 sugar binding protein compare
Atu4773 -1.2 -2.4 two component response regulator compare
Atu1028 -1.2 -3.0 hypothetical protein compare
Atu2238 -1.2 -7.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1774 -1.1 -7.0 ABC transporter, substrate binding protein (peptide) compare
Atu2237 -1.1 -5.9 cytochrome c1 compare
Atu3663 -1.1 -1.4 hypothetical protein compare
Atu2692 -1.1 -4.0 intracellular septation protein compare
Atu2123 -1.1 -6.1 methylenetetrahydrofolate reductase compare
Atu2044 -1.1 -5.4 HFLC protein compare
Atu2746 -1.1 -3.3 hypothetical protein compare
Atu0188 -1.1 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0190 -1.0 -6.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1683 -1.0 -2.6 hypothetical protein compare
Atu1457 -1.0 -1.8 hypothetical protein compare
Atu4635 -0.9 -4.1 hypothetical protein compare
Atu0658 -0.9 -5.9 phosphate permease compare
Atu4541 -0.9 -3.4 carboxymuconolactone decarboxylase compare
Atu3008 -0.9 -0.8 hypothetical protein compare
Atu2207 -0.9 -2.9 two component sensor kinase compare
Atu1455 -0.9 -2.5 hypothetical protein compare
Atu2239 -0.9 -2.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1466 -0.9 -1.6 hypothetical protein compare
Atu0508 -0.9 -2.4 PH Adaption potassium efflux system compare
Atu2020 -0.9 -1.9 transcriptional regulator, TetR family compare
Atu0510 -0.9 -6.1 pH adaption potassium efflux system protein compare
Atu0533 -0.9 -2.3 putative inhibitor of septum formation compare
Atu8131 -0.9 -5.8 pH adaption potassium efflux system protein compare
Atu1904 -0.9 -2.6 transcriptional regulator compare
Atu0361 -0.9 -2.4 transcriptional regulator compare
Atu2555 -0.8 -3.9 L-lysine 2,3-aminomutase compare
Atu2349 -0.8 -2.1 hypothetical protein compare
Atu4317 -0.8 -1.8 TetR family transcriptional regulator compare
Atu2245 -0.8 -6.2 Na+/Pi-cotransporter compare
Atu3623 -0.8 -3.2 DnaJ family molecular chaperone compare
Atu1447 -0.8 -2.2 two component sensor kinase compare
Atu1570 -0.8 -0.9 hypothetical protein compare
Atu0386 -0.8 -1.9 hypothetical protein compare
Atu3908 -0.8 -5.4 GntR family transcriptional regulator compare
Atu5034 -0.8 -2.1 hypothetical protein compare
Atu0971 -0.8 -3.4 two component sensor kinase compare
Atu0770 -0.8 -3.7 cytochrome C oxidase assembly protein compare
Atu8088 -0.8 -1.5 hypothetical protein compare
Atu4217 -0.8 -1.6 TetR family transcriptional regulator compare
Atu0981 -0.8 -5.9 glutamate-ammonia-ligase adenylyltransferase compare
Atu1572 -0.8 -5.2 hydrolase compare
Atu2640 -0.8 -3.4 hypothetical protein compare
Atu1445 -0.8 -4.0 two component sensor kinase compare
Atu5486 -0.7 -2.4 hypothetical protein compare
Atu0786 -0.7 -2.9 peptidase, family M16 compare
Atu4040 -0.7 -3.0 hypothetical protein compare
Atu5035 -0.7 -3.0 hypothetical protein compare
Atu6163 -0.7 -3.8 hypothetical protein compare
Atu0206 -0.7 -1.7 hypothetical protein compare
Atu4674 -0.7 -4.6 GntR family transcriptional regulator compare
Atu0845 -0.7 -2.9 hypothetical protein compare
Atu1077 -0.7 -2.7 DNA repair protein compare
Atu2633 -0.7 -1.5 RhtB family transporter compare
Atu6009 -0.7 -1.8 indole-3-lactate synthase compare
Atu1419 -0.7 -3.8 transcriptional regulator, GntR family compare
Atu2800 -0.7 -1.5 precorrin-3B C17-methyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Glucose in Agrobacterium fabrum C58

For carbon source D-Glucose across organisms