Experiment set1IT050 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Cobalt chloride hexahydrate 0.3 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_07030 +1.9 14.1 UDP-glucose 4-epimerase compare
CA264_07245 +1.8 14.4 hypothetical protein compare
CA264_00015 +1.8 10.4 hypothetical protein compare
CA264_17100 +1.7 2.8 hypothetical protein compare
CA264_02025 +1.6 7.5 nitroreductase compare
CA264_19860 +1.4 8.8 NifU family protein compare
CA264_03680 +1.4 5.6 hypothetical protein compare
CA264_04560 +1.3 10.5 histidine ammonia-lyase compare
CA264_15340 +1.3 2.6 hypothetical protein compare
CA264_07260 +1.3 7.1 hypothetical protein compare
CA264_20120 +1.3 4.8 hypothetical protein compare
CA264_08870 +1.3 7.0 imidazolonepropionase compare
CA264_20935 +1.3 1.3 transcriptional regulator compare
CA264_13015 +1.3 9.6 sensor histidine kinase compare
CA264_10920 +1.2 8.2 helix-turn-helix-type transcriptional regulator compare
CA264_17095 +1.2 3.6 FeoB-associated Cys-rich membrane protein compare
CA264_19005 +1.1 9.4 SusC/RagA family TonB-linked outer membrane protein compare
CA264_17760 +1.1 7.4 leucine dehydrogenase compare
CA264_19925 +1.0 4.8 peptidyl-prolyl cis-trans isomerase compare
CA264_16925 +1.0 6.4 SAM-dependent methyltransferase compare
CA264_03675 +1.0 5.0 hypothetical protein compare
CA264_06335 +1.0 2.0 Na+/H+ antiporter subunit G compare
CA264_17390 +1.0 3.9 hypothetical protein compare
CA264_06355 +1.0 7.2 ergothioneine biosynthesis protein EgtB compare
CA264_17565 +1.0 1.9 hypothetical protein compare
CA264_20570 +1.0 1.4 inorganic pyrophosphatase compare
CA264_19010 +1.0 9.0 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_15590 +0.9 3.0 metal-dependent hydrolase compare
CA264_10575 +0.9 2.4 hypothetical protein compare
CA264_02615 +0.9 5.6 DNA-binding response regulator compare
CA264_21050 +0.9 2.6 hypothetical protein compare
CA264_19545 +0.9 4.6 oxidoreductase compare
CA264_07265 +0.9 7.1 patatin compare
CA264_01065 +0.9 3.9 MarR family transcriptional regulator compare
CA264_21040 +0.8 3.3 transcriptional regulator compare
CA264_19785 +0.8 6.5 TonB-dependent receptor compare
CA264_02030 +0.8 3.3 hypothetical protein compare
CA264_00295 +0.8 2.4 hypothetical protein compare
CA264_11715 +0.8 3.3 hypothetical protein compare
CA264_02180 +0.8 1.7 response regulator compare
CA264_14580 +0.8 2.2 hypothetical protein compare
CA264_15870 +0.8 4.6 long-chain fatty acid--CoA ligase compare
CA264_05785 +0.7 1.4 cbb3-type cytochrome oxidase assembly protein CcoS compare
CA264_21045 +0.7 2.4 hypothetical protein compare
CA264_10805 +0.7 2.9 NADPH-dependent oxidoreductase compare
CA264_10585 +0.7 2.2 hypothetical protein compare
CA264_15335 +0.7 6.3 SusC/RagA family TonB-linked outer membrane protein compare
CA264_17105 +0.7 4.2 mechanosensitive ion channel protein MscS compare
CA264_06330 +0.7 2.3 cation:proton antiporter compare
CA264_13420 +0.7 1.4 hypothetical protein compare
CA264_21035 +0.7 5.3 mobilization protein compare
CA264_19875 +0.6 2.2 RNA methyltransferase compare
CA264_15710 +0.6 5.0 hypothetical protein compare
CA264_08945 +0.6 3.0 type 1 glutamine amidotransferase domain-containing protein compare
CA264_12160 +0.6 1.9 transcriptional regulator compare
CA264_02415 +0.6 2.9 dethiobiotin synthase compare
CA264_13480 +0.6 2.5 hypothetical protein compare
CA264_03870 +0.6 3.3 transcription elongation factor GreA compare
CA264_14280 +0.6 2.9 hypothetical protein compare
CA264_21060 +0.6 4.7 hypothetical protein compare
CA264_10005 +0.6 1.5 hypothetical protein compare
CA264_19920 +0.6 4.4 alanine glycine permease compare
CA264_20455 +0.5 3.8 LLM class flavin-dependent oxidoreductase compare
CA264_09430 +0.5 2.9 2-isopropylmalate synthase compare
CA264_12990 +0.5 2.4 ferritin compare
CA264_10570 +0.5 3.0 hypothetical protein compare
CA264_17560 +0.5 3.8 hypothetical protein compare
CA264_19750 +0.5 2.9 IMP dehydrogenase compare
CA264_06460 +0.5 2.6 NUDIX domain-containing protein compare
CA264_14350 +0.5 3.5 hemolysin compare
CA264_09545 +0.5 1.3 hypothetical protein compare
CA264_00560 +0.5 2.5 hypothetical protein compare
CA264_15245 +0.5 3.7 hypothetical protein compare
CA264_05170 +0.5 3.2 phosphohydrolase compare
CA264_12720 +0.5 2.1 hypothetical protein compare
CA264_05300 +0.5 3.0 hypothetical protein compare
CA264_13910 +0.5 2.7 response regulator compare
CA264_17530 +0.5 3.4 hemolysin compare
CA264_18515 +0.5 1.3 GntR family transcriptional regulator compare
CA264_10045 +0.5 0.8 hypothetical protein compare
CA264_07270 +0.5 3.4 hypothetical protein compare
CA264_18775 +0.5 0.9 hypothetical protein compare
CA264_08950 +0.5 3.2 short-chain dehydrogenase/reductase compare
CA264_00835 +0.5 2.2 hypothetical protein compare
CA264_05175 +0.5 2.5 hypothetical protein compare
CA264_13025 +0.5 1.6 hypothetical protein compare
CA264_11015 +0.5 3.8 hypothetical protein compare
CA264_02055 +0.5 0.8 hypothetical protein compare
CA264_00485 +0.5 4.0 peptidase M4 compare
CA264_04290 +0.5 3.0 ABC transporter permease compare
CA264_01025 +0.5 1.1 hypothetical protein compare
CA264_19060 +0.5 3.7 hypothetical protein compare
CA264_13035 +0.5 3.0 MexH family multidrug efflux RND transporter periplasmic adaptor subunit compare
CA264_10580 +0.5 1.4 hypothetical protein compare
CA264_05415 +0.5 1.3 DsbA family protein compare
CA264_18245 +0.5 0.9 NADH-quinone oxidoreductase subunit A compare
CA264_07645 +0.5 2.4 hypothetical protein compare
CA264_19080 +0.5 2.9 hypothetical protein compare
CA264_03530 +0.5 2.4 hypothetical protein compare
CA264_12515 +0.5 1.8 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_19135 +0.5 1.3 hypothetical protein compare
CA264_21090 +0.5 2.6 hypothetical protein compare
CA264_18860 +0.5 3.5 TIGR00374 family protein compare
CA264_12855 +0.5 1.3 hypothetical protein compare
CA264_16855 +0.5 2.6 hypothetical protein compare
CA264_08125 +0.5 2.4 tetratricopeptide repeat protein compare
CA264_15005 +0.5 3.2 magnesium/cobalt efflux protein compare
CA264_21010 +0.5 2.6 conjugative transposon protein TraK compare
CA264_02620 +0.5 2.6 two-component sensor histidine kinase compare
CA264_19685 +0.5 0.5 DNA-binding response regulator compare
CA264_07675 +0.5 2.8 MATE family efflux transporter compare
CA264_02185 +0.5 1.8 GNAT family N-acetyltransferase compare
CA264_00405 +0.5 1.4 transcriptional repressor compare
CA264_16230 +0.5 2.6 protease compare
CA264_13605 +0.5 2.8 hypothetical protein compare
CA264_18150 +0.4 2.7 energy-dependent translational throttle protein EttA compare
CA264_12155 +0.4 1.2 histidine phosphatase family protein compare
CA264_12850 +0.4 2.5 hypothetical protein compare
CA264_14200 +0.4 0.8 NADH-quinone oxidoreductase subunit A compare
CA264_13310 +0.4 3.6 glycosyl hydrolase compare
CA264_03380 +0.4 2.2 hypothetical protein compare
CA264_09355 +0.4 1.9 nitroreductase compare
CA264_19095 +0.4 2.0 hypothetical protein compare
CA264_00040 +0.4 3.6 hypothetical protein compare
CA264_12150 +0.4 1.2 hypothetical protein compare
CA264_13300 +0.4 2.8 rhomboid family intramembrane serine protease compare
CA264_06325 +0.4 2.7 cation:proton antiporter compare
CA264_06340 +0.4 3.0 protein phosphatase compare
CA264_12165 +0.4 2.7 hypothetical protein compare
CA264_02495 +0.4 2.3 hypothetical protein compare
CA264_16150 +0.4 0.7 acyl carrier protein compare
CA264_14965 +0.4 3.0 glycosyltransferase WbuB compare
CA264_03090 +0.4 2.6 hypothetical protein compare
CA264_12605 +0.4 2.5 stress protection protein MarC compare
CA264_02115 +0.4 1.5 threonylcarbamoyl-AMP synthase compare
CA264_21025 +0.4 3.3 conjugative transposon protein TraN compare
CA264_02035 +0.4 3.1 hypothetical protein compare
CA264_14885 +0.4 1.7 hypothetical protein compare
CA264_01795 +0.4 1.4 hypothetical protein compare
CA264_09820 +0.4 2.1 hypothetical protein compare
CA264_06320 +0.4 3.0 Na+/H+ antiporter subunit D compare
CA264_15330 +0.4 3.4 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_13660 +0.4 1.6 putative DNA modification/repair radical SAM protein compare
CA264_01585 +0.4 1.9 hypothetical protein compare
CA264_15720 +0.4 1.5 phosphohistidine phosphatase compare
CA264_03670 +0.4 1.8 polyisoprenoid-binding protein compare
CA264_11065 +0.4 2.3 hypothetical protein compare
CA264_18525 +0.4 1.7 hypothetical protein compare
CA264_20980 +0.4 1.1 conjugal transfer protein compare
CA264_12475 +0.4 2.8 alanine dehydrogenase compare
CA264_20075 +0.4 2.7 hypothetical protein compare
CA264_12240 +0.4 1.8 ABC transporter ATP-binding protein compare
CA264_14360 +0.4 1.4 gamma carbonic anhydrase family protein compare
CA264_09815 +0.4 0.6 hypothetical protein compare
CA264_02120 +0.4 1.8 GNAT family N-acetyltransferase compare
CA264_10875 +0.4 0.8 MerP protein compare
CA264_18030 +0.4 2.5 cation transporter compare
CA264_06925 +0.4 1.7 acetolactate synthase small subunit compare
CA264_07665 +0.4 2.9 sulfurtransferase compare
CA264_17930 +0.4 2.2 flavonol synthase compare
CA264_13040 +0.4 2.8 acriflavin resistance protein compare
CA264_16875 +0.4 1.0 hypothetical protein compare
CA264_12190 +0.4 1.6 hypothetical protein compare
CA264_04460 +0.4 0.7 ABC transporter compare
CA264_09765 +0.4 1.6 NAD(P)H-dependent oxidoreductase compare
CA264_13020 +0.4 1.6 hypothetical protein compare
CA264_05765 +0.4 2.0 cytochrome c oxidase accessory protein CcoG compare
CA264_06600 +0.4 2.7 glycosyltransferase compare
CA264_17215 +0.4 1.6 damage-inducible protein DinB compare
CA264_15760 +0.4 1.6 hypothetical protein compare
CA264_15680 +0.4 1.4 hypothetical protein compare
CA264_01645 +0.4 0.6 hypothetical protein compare
CA264_21185 +0.4 1.3 hypothetical protein compare
CA264_14950 +0.4 2.5 hypothetical protein compare
CA264_11810 +0.4 1.1 HAD family hydrolase compare
CA264_04185 +0.4 1.5 phosphatidylethanolamine-binding protein compare
CA264_04500 +0.4 1.9 bacitracin ABC transporter ATP-binding protein compare
CA264_13650 +0.4 1.4 hypothetical protein compare
CA264_02370 +0.4 2.4 O-acetylhomoserine aminocarboxypropyltransferase compare
CA264_05165 +0.4 2.9 potassium transporter KefB compare
CA264_00235 +0.4 1.5 hypothetical protein compare
CA264_08955 +0.4 2.6 DNA polymerase IV compare
CA264_10695 +0.4 1.9 anti-sigma regulatory factor compare
CA264_00190 +0.3 2.9 RagB/SusD family nutrient uptake outer membrane protein compare
CA264_21525 +0.3 1.9 DUF305 domain-containing protein compare
CA264_00550 +0.3 2.2 heme oxygenase compare
CA264_16405 +0.3 1.8 YraN family protein compare
CA264_05250 +0.3 2.8 hypothetical protein compare
CA264_11215 +0.3 1.8 N-acetyltransferase compare
CA264_04700 +0.3 2.9 cyanophycin synthetase compare
CA264_08475 +0.3 1.1 hypothetical protein compare
CA264_18790 +0.3 2.2 thymidine kinase compare
CA264_19250 +0.3 2.5 alanyl aminopeptidase compare
CA264_08080 +0.3 1.1 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_10590 +0.3 2.2 hypothetical protein compare
CA264_03095 +0.3 2.3 hypothetical protein compare
CA264_07485 +0.3 1.5 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_02465 +0.3 1.3 hypothetical protein compare
CA264_21570 +0.3 2.0 hypothetical protein compare
CA264_19670 +0.3 1.5 NADPH:quinone oxidoreductase compare


Specific Phenotypes

For 6 genes in this experiment

For stress Cobalt chloride hexahydrate in Pontibacter actiniarum KMM 6156, DSM 19842

For stress Cobalt chloride hexahydrate across organisms