Experiment set1IT050 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu0602 -5.4 -13.6 glutamine synthetase compare
Atu1030 -5.3 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0659 -5.1 -5.0 NTP pyrophosphohydrolase, MutT family compare
Atu0422 -4.9 -3.2 ABC transporter, membrane spanning protein compare
Atu0601 -4.5 -15.0 oxidoreductase compare
Atu0999 -4.5 -10.8 magnesium transport protein compare
Atu6098 -3.8 -1.0 transcriptional regulator, HTH family compare
Atu3730 -3.5 -2.3 hypothetical protein compare
Atu0421 -2.8 -1.8 ABC transporter, membrane spanning protein compare
Atu0189 -2.7 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0030 -2.6 -1.7 phosphocarrier protein HPr compare
Atu2125 -2.5 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu2684 -2.4 -2.1 hypothetical protein compare
Atu0777 -2.2 -1.0 hypothetical protein compare
Atu1021 -2.2 -2.7 outer membrane protein compare
Atu0912 -2.1 -1.4 Na+/H+ antiporter compare
Atu0434 -2.0 -2.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2692 -2.0 -5.1 intracellular septation protein compare
Atu2831 -1.9 -6.5 glucose inhibited division protein A compare
Atu0388 -1.8 -10.7 two component sensor kinase compare
Atu3763 -1.8 -1.9 hypothetical protein compare
Atu0188 -1.8 -3.0 ABC transporter, membrane spanning protein (peptide) compare
Atu1810 -1.7 -1.3 hypothetical protein compare
Atu0658 -1.7 -7.8 phosphate permease compare
Atu1359 -1.7 -1.1 dnaK deletion suppressor protein compare
Atu2832 -1.6 -3.4 tRNA modification GTPase compare
Atu5451 -1.5 -1.1 hypothetical protein compare
Atu0508 -1.4 -2.4 PH Adaption potassium efflux system compare
Atu0977 -1.4 -3.5 serine protease DO-like protease compare
Atu2044 -1.4 -5.0 HFLC protein compare
Atu0510 -1.4 -6.9 pH adaption potassium efflux system protein compare
Atu0641 -1.4 -2.6 hypothetical protein compare
Atu0368 -1.4 -5.8 tRNA pseudouridine synthase I compare
Atu8131 -1.3 -8.1 pH adaption potassium efflux system protein compare
Atu1163 -1.3 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4635 -1.3 -4.6 hypothetical protein compare
Atu4173 -1.3 -2.3 phosphoenolpyruvate-protein phosphotransferase compare
Atu1774 -1.3 -6.2 ABC transporter, substrate binding protein (peptide) compare
Atu3299 -1.3 -1.9 hypothetical protein compare
Atu1470 -1.2 -1.0 Camphor resistance protein compare
Atu2207 -1.2 -2.3 two component sensor kinase compare
Atu0690 -1.1 -2.2 hypothetical protein compare
Atu0971 -1.1 -3.7 two component sensor kinase compare
Atu3910 -1.1 -2.9 LamB/YcsF family protein compare
Atu2682 -1.1 -2.2 hypothetical protein compare
Atu3712 -1.1 -0.9 hypothetical protein compare
Atu2245 -1.1 -6.8 Na+/Pi-cotransporter compare
Atu2484 -1.1 -1.3 hypothetical protein compare
Atu0566 -1.1 -1.4 hypothetical protein compare
Atu0533 -1.1 -2.6 putative inhibitor of septum formation compare
Atu3468 -1.1 -0.8 hypothetical protein compare
Atu4317 -1.1 -2.6 TetR family transcriptional regulator compare
Atu3467 -1.1 -1.8 hypothetical protein compare
Atu2045 -1.0 -3.5 HFLK protein compare
Atu2146 -1.0 -3.2 hypothetical protein compare
Atu4616 -1.0 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu2585 -1.0 -4.2 hypothetical protein compare
Atu0507 -1.0 -2.7 potassium efflux system protein compare
Atu0946 -1.0 -6.9 dehydrogenase compare
Atu0190 -1.0 -3.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2728 -1.0 -3.7 beta (1-->2) glucan export ATP-binding protein compare
Atu3732 -1.0 -6.0 hemolysin compare
Atu3336 -1.0 -1.7 hypothetical protein compare
Atu0925 -0.9 -2.0 hypothetical protein compare
Atu4724 -0.9 -1.6 hypothetical protein compare
Atu0947 -0.9 -3.1 transcriptional regulator, AsnC family compare
Atu8117 -0.9 -1.8 hypothetical protein compare
Atu3160 -0.9 -1.3 hypothetical protein compare
Atu1447 -0.9 -1.9 two component sensor kinase compare
Atu1891 -0.9 -2.3 cobalamin biosynthesis protein compare
Atu2662 -0.9 -0.6 acetyltransferase compare
Atu1323 -0.9 -2.1 hypothetical protein compare
Atu0876 -0.9 -1.6 superoxide dismutase compare
Atu0399 -0.9 -3.2 dihydroorotase compare
Atu3469 -0.9 -1.7 phosphoglyceromutase compare
Atu2163 -0.9 -1.0 hypothetical protein compare
Atu1285 -0.9 -3.4 metal dependent hydrolase compare
Atu2378 -0.8 -1.8 hypothetical protein compare
Atu4610 -0.8 -5.0 sugar nucleotide epimerase/dehydratase compare
Atu0184 -0.8 -1.5 glucokinase compare
Atu0331 -0.8 -1.2 sigma-54 modulation protein compare
Atu0479 -0.8 -4.1 ABC transporter, substrate binding protein (amino acid) compare
Atu4338 -0.8 -3.9 hypothetical protein compare
Atu2590 -0.8 -4.0 hypothetical protein compare
Atu8053 -0.8 -2.0 hypothetical protein compare
Atu3698 -0.8 -1.9 thioredoxin compare
Atu8162 -0.8 -0.9 hypothetical protein compare
Atu8177 -0.8 -1.7 hypothetical protein compare
Atu0923 -0.8 -3.2 hypothetical protein compare
Atu2633 -0.8 -1.2 RhtB family transporter compare
Atu5034 -0.8 -1.3 hypothetical protein compare
Atu2052 -0.8 -4.1 hypothetical protein compare
Atu1642 -0.8 -1.3 hypothetical protein compare
Atu2800 -0.8 -1.6 precorrin-3B C17-methyltransferase compare
Atu2433 -0.8 -0.9 hypothetical protein compare
Atu3628 -0.8 -3.8 hypothetical protein compare
Atu0463 -0.8 -2.7 hypothetical protein compare
Atu5160 -0.8 -1.9 transcriptional regulator protein compare
Atu2439 -0.8 -0.9 hypothetical protein compare
Atu0939 -0.8 -1.8 PemI protein compare
Atu3009 -0.8 -0.6 exopolysaccharide production protein compare
Atu0784 -0.8 -2.4 hypothetical protein compare
Atu1513 -0.8 -3.2 ABC excinuclease subunit A compare
Atu4217 -0.7 -0.9 TetR family transcriptional regulator compare
Atu0786 -0.7 -3.4 peptidase, family M16 compare
Atu1747 -0.7 -1.6 hypothetical protein compare
Atu4166 -0.7 -1.2 UDP-glucose 4-epimerase compare
Atu8023 -0.7 -1.3 hypothetical protein compare
Atu0031 -0.7 -0.8 PTS system, IIA component compare
Atu1838 -0.7 -2.7 ABC transporter, substrate binding protein (amino acid) compare
Atu0340 -0.7 -1.0 SAM dependent methyltransferase compare
Atu3246 -0.7 -2.1 amino acid ABC transporter substrate-binding protein compare
Atu2306 -0.7 -2.0 methionine aminopeptidase compare
Atu0228 -0.7 -2.9 hypothetical protein compare
Atu4407 -0.7 -1.5 periplasmic nitrate reductase, NapD protein compare
Atu3623 -0.7 -2.4 DnaJ family molecular chaperone compare
Atu3218 -0.7 -1.5 hypothetical protein compare
Atu5493 -0.7 -2.1 hypothetical protein compare
Atu0142 -0.7 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu2554 -0.7 -1.0 lysyl-tRNA synthetase compare
Atu2783 -0.7 -2.3 acetyltransferase compare
Atu5502 -0.7 -2.0 hypothetical protein compare
Atu0736 -0.7 -3.4 hemolysin compare
Atu4618 -0.7 -4.4 dTDP-rhamnose-3,5-epimerase compare
Atu2376 -0.7 -1.5 hypothetical protein compare
Atu2746 -0.6 -1.6 hypothetical protein compare
Atu0498 -0.6 -3.0 hypothetical protein compare
Atu1103 -0.6 -1.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu4756 -0.6 -2.6 hypothetical protein compare
Atu0039 -0.6 -1.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu4615 -0.6 -3.6 glucose-1-phosphate thymidylyltransferase compare
Atu1853 -0.6 -1.7 hypothetical protein compare
Atu1204 -0.6 -1.8 potassium uptake protein compare
Atu1677 -0.6 -1.4 queuine tRNA-ribosyltransferase compare
Atu2799 -0.6 -2.3 precorrin-6x reductase compare
Atu1628 -0.6 -1.2 hypothetical protein compare
Atu1503 -0.6 -0.6 hypothetical protein compare
Atu4290 -0.6 -2.1 hypothetical protein compare
Atu3465 -0.6 -1.4 metallo-beta-lactamase superfamily protein compare
Atu5114 -0.6 -1.7 hypothetical protein compare
Atu2068 -0.6 -2.5 hypothetical protein compare
Atu8096 -0.6 -0.9 hypothetical protein compare
Atu1729 -0.6 -2.7 putative molybdenum cofactor biosynthesis protein compare
Atu4878 -0.6 -2.1 hypothetical protein compare
Atu1994 -0.6 -1.7 acyl-CoA hydrolase compare
Atu0769 -0.6 -0.9 protoheme IX farnesyltransferase compare
Atu2489 -0.6 -2.9 hypothetical protein compare
Atu5047 -0.6 -1.9 hypothetical protein compare
Atu8189 -0.6 -1.4 hypothetical protein compare
Atu3608 -0.6 -2.9 hypothetical protein compare
Atu2083 -0.6 -1.8 DNA repair protein RecN compare
Atu0106 -0.6 -1.3 cold shock protein compare
Atu5125 -0.6 -2.4 GntR family transcriptional regulator compare
Atu4115 -0.6 -2.9 dipeptide ABC transporter permease compare
Atu1131 -0.6 -3.1 outer membrane protein compare
Atu3472 -0.6 -2.0 2-oxoisovalerate dehydrogenase subunit beta compare
Atu4362 -0.6 -2.8 hypothetical protein compare
Atu1636 -0.6 -2.4 hypothetical protein compare
Atu3999 -0.6 -1.3 dithiobiotin synthetase compare
Atu0843 -0.6 -4.3 P type cation (metal) transporter, ATPase component compare
Atu2776 -0.6 -3.1 hypothetical protein compare
Atu1906 -0.6 -1.3 ABC transporter, membrane spanning protein compare
Atu1693 -0.6 -4.0 glutathione-regulated potassium-efflux system protein compare
Atu3493 -0.6 -2.8 non-heme haloperoxidase compare
Atu1048 -0.6 -3.5 ABC transporter, membrane spanning protein compare
Atu2273 -0.6 -2.0 hypothetical protein compare
Atu8099 -0.6 -1.1 hypothetical protein compare
Atu6163 -0.6 -2.3 hypothetical protein compare
Atu1678 -0.6 -2.4 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu4117 -0.6 -1.7 dipeptide ABC transporter ATPase compare
Atu3554 -0.5 -2.0 hypothetical protein compare
Atu3215 -0.5 -2.0 oligopeptide ABC transporter ATPase compare
Atu1724 -0.5 -1.6 hypothetical protein compare
Atu4114 -0.5 -2.4 dipeptide ABC transporter permease compare
Atu5109 -0.5 -1.2 conjugal transfer protein compare
Atu0149 -0.5 -1.6 enoyl-(acyl-carrier-protein) reductase compare
Atu2209 -0.5 -1.8 pyrroline-5-carboxylate reductase compare
Atu2555 -0.5 -1.7 L-lysine 2,3-aminomutase compare
Atu5107 -0.5 -1.4 hypothetical protein compare
Atu0583 -0.5 -2.4 hypothetical protein compare
Atu3517 -0.5 -2.6 acetyltransferase compare
Atu1646 -0.5 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0511 -0.5 -1.7 pH adaption potassium efflux system protein compare
Atu1770 -0.5 -2.9 glutamine synthetase compare
Atu4393 -0.5 -2.2 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
Atu0231 -0.5 -2.4 GMP synthase compare
Atu3657 -0.5 -2.8 hypothetical protein compare
Atu0905 -0.5 -2.4 dnaK suppressor protein compare
Atu0269 -0.5 -1.7 exodeoxyribonuclease VII large subunit compare
Atu1784 -0.5 -1.8 hypothetical protein compare
Atu1219 -0.5 -0.5 hypothetical protein compare
Atu3780 -0.5 -2.5 hypothetical protein compare
Atu1449 -0.5 -2.6 potassium uptake protein compare
Atu2063 -0.5 -1.0 hypothetical protein compare
Atu1855 -0.5 -2.7 MFS permease compare
Atu0107 -0.5 -0.8 hypothetical protein compare
Atu5150 -0.5 -2.0 glutathione S-transferase compare
Atu0751 -0.5 -1.5 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0580 -0.5 -0.8 flagellar biosynthetic protein compare
Atu0842 -0.5 -0.6 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment