Experiment set1IT047 for Rhizobium sp. OAE497

Compare to:

D-Sorbitol carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS09155 -6.8 -4.7 DUF934 domain-containing protein compare
ABIE40_RS18590 -6.7 -6.5 homoserine O-succinyltransferase compare
ABIE40_RS02340 -6.5 -7.8 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS11950 -6.5 -4.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS19415 -6.3 -12.2 phosphoenolpyruvate carboxykinase compare
ABIE40_RS00245 -6.2 -9.5 prephenate dehydratase compare
ABIE40_RS18380 -6.2 -10.4 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS19040 -6.1 -4.2 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS13330 -5.9 -8.2 2-isopropylmalate synthase compare
ABIE40_RS19050 -5.8 -10.5 3-isopropylmalate dehydrogenase compare
ABIE40_RS18775 -5.7 -11.0 pyruvate carboxylase compare
ABIE40_RS09095 -5.7 -3.9 PAS domain-containing sensor histidine kinase compare
ABIE40_RS12845 -5.6 -3.9 glycosyltransferase family 4 protein compare
ABIE40_RS06555 -5.5 -3.4 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS09150 -5.5 -16.2 nitrite/sulfite reductase compare
ABIE40_RS19355 -5.5 -5.1 thioredoxin compare
ABIE40_RS08635 -5.4 -5.3 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS09545 -5.4 -3.7 anthranilate phosphoribosyltransferase compare
ABIE40_RS18920 -5.4 -5.8 glutamate 5-kinase compare
ABIE40_RS17530 -5.3 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS16645 -5.3 -19.9 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS04215 -5.3 -3.6 sensor domain-containing phosphodiesterase compare
ABIE40_RS16320 -5.2 -3.6 histidinol-phosphatase compare
ABIE40_RS09660 -5.2 -12.9 AI-2E family transporter compare
ABIE40_RS03665 -5.2 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS10725 -5.1 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS01970 -5.1 -3.5 acetylglutamate kinase compare
ABIE40_RS03660 -5.0 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS02325 -5.0 -3.5 ornithine carbamoyltransferase compare
ABIE40_RS19435 -5.0 -3.0 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS02725 -4.9 -5.8 histidinol dehydrogenase compare
ABIE40_RS10720 -4.9 -3.3 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS20450 -4.8 -3.3 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS10345 -4.7 -3.3 RNA polymerase-binding protein DksA compare
ABIE40_RS11175 -4.7 -3.2 cobyric acid synthase compare
ABIE40_RS06930 -4.7 -3.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS09725 -4.7 -3.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS19440 -4.6 -3.2 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS11105 -4.6 -4.5 cobyrinate a,c-diamide synthase compare
ABIE40_RS19330 -4.6 -3.2 phosphoribosylanthranilate isomerase compare
ABIE40_RS06560 -4.6 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS13410 -4.6 -3.2 anthranilate synthase compare
ABIE40_RS17650 -4.5 -3.1 cobaltochelatase subunit CobS compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS11165 -4.5 -3.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS09360 -4.5 -3.1 excinuclease ABC subunit UvrA compare
ABIE40_RS11495 -4.4 -3.1 acetolactate synthase 3 large subunit compare
ABIE40_RS11095 -4.3 -3.0 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS17595 -4.3 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS12360 -4.3 -12.6 DUF5131 family protein compare
ABIE40_RS01930 -4.3 -2.5 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS19450 -4.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS06730 -4.2 -6.1 riboflavin synthase compare
ABIE40_RS18055 -4.2 -2.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS20455 -4.2 -2.5 precorrin-8X methylmutase compare
ABIE40_RS10180 -4.1 -4.9 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS18925 -4.1 -6.2 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS19130 -4.1 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS11155 -4.1 -4.8 cobaltochelatase subunit CobN compare
ABIE40_RS11150 -4.0 -9.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS20465 -4.0 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS17525 -4.0 -3.0 lipoprotein compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS14985 -3.9 -2.7 glycosyltransferase compare
ABIE40_RS11020 -3.9 -11.4 substrate-binding domain-containing protein compare
ABIE40_RS06270 -3.9 -8.2 amidophosphoribosyltransferase compare
ABIE40_RS15855 -3.9 -3.0 cell division protein ZapA compare
ABIE40_RS03405 -3.8 -2.6 anti-sigma factor compare
ABIE40_RS20435 -3.8 -3.7 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS19445 -3.8 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS12135 -3.8 -2.6 methionine synthase compare
ABIE40_RS20905 -3.8 -7.4 IclR family transcriptional regulator compare
ABIE40_RS14990 -3.8 -11.3 glycosyltransferase family 2 protein compare
ABIE40_RS03485 -3.8 -14.9 MAPEG family protein compare
ABIE40_RS08970 -3.7 -9.6 citrate synthase compare
ABIE40_RS08140 -3.7 -15.7 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS16070 -3.7 -4.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS20430 -3.7 -3.6 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS19480 -3.6 -2.5 DUF1402 family protein compare
ABIE40_RS02320 -3.6 -5.0 aspartate aminotransferase family protein compare
ABIE40_RS11060 -3.6 -5.5 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS19260 -3.6 -2.5 DNA polymerase III subunit epsilon compare
ABIE40_RS17020 -3.6 -11.8 sugar-binding transcriptional regulator compare
ABIE40_RS26850 -3.6 -1.8 hypothetical protein compare
ABIE40_RS25740 -3.6 -9.9 FadR/GntR family transcriptional regulator compare
ABIE40_RS01135 -3.5 -1.2 50S ribosomal protein L20 compare
ABIE40_RS05430 -3.5 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS18720 -3.5 -2.4 polyprenyl synthetase family protein compare
ABIE40_RS17590 -3.4 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS08865 -3.4 -10.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS00725 -3.3 -4.0 DNA cytosine methyltransferase compare
ABIE40_RS12925 -3.3 -13.3 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS14980 -3.3 -5.1 glycoside hydrolase family 16 protein compare
ABIE40_RS05690 -3.3 -6.3 cytochrome c-type biogenesis protein compare
ABIE40_RS10155 -3.3 -2.2 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS17645 -3.3 -4.4 cobaltochelatase subunit CobT compare
ABIE40_RS14855 -3.2 -8.2 NAD-dependent epimerase compare
ABIE40_RS20445 -3.2 -1.6 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS19395 -3.2 -4.3 PTS sugar transporter subunit IIA compare
ABIE40_RS14850 -3.1 -10.0 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS17565 -3.1 -2.3 ABC transporter permease compare
ABIE40_RS16655 -3.0 -8.2 creatininase family protein compare
ABIE40_RS00930 -3.0 -7.5 ABC transporter permease compare
ABIE40_RS24310 -2.9 -7.4 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS12855 -2.9 -10.9 glycosyltransferase family 2 protein compare
ABIE40_RS23250 -2.8 -11.8 hypothetical protein compare
ABIE40_RS24490 -2.8 -1.7 flavin reductase compare
ABIE40_RS09720 -2.8 -3.8 GTP cyclohydrolase I FolE compare
ABIE40_RS19700 -2.8 -3.3 MBL fold metallo-hydrolase compare
ABIE40_RS12115 -2.8 -2.7 GntR family transcriptional regulator compare
ABIE40_RS06050 -2.7 -6.3 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS00580 -2.7 -2.8 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS24355 -2.7 -9.0 LacI family DNA-binding transcriptional regulator compare
ABIE40_RS09140 -2.7 -6.2 siroheme synthase CysG compare
ABIE40_RS10390 -2.7 -3.0 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS02075 -2.6 -11.3 ROK family transcriptional regulator compare
ABIE40_RS14955 -2.6 -10.1 sugar transferase compare
ABIE40_RS00490 -2.6 -10.4 DNA polymerase I compare
ABIE40_RS18880 -2.6 -11.9 UDP-glucose 4-epimerase GalE compare
ABIE40_RS15560 -2.6 -6.4 phosphoglycerate dehydrogenase compare
ABIE40_RS05685 -2.6 -11.3 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS13130 -2.6 -11.7 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABIE40_RS09085 -2.6 -5.7 nitrogen regulation protein NR(II) compare
ABIE40_RS06725 -2.6 -5.0 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS04080 -2.5 -10.5 cytochrome c oxidase assembly protein compare
ABIE40_RS09090 -2.5 -8.5 nitrogen regulation protein NR(I) compare
ABIE40_RS04085 -2.5 -9.9 cytochrome c oxidase subunit 3 compare
ABIE40_RS13120 -2.5 -9.0 cytochrome c1 compare
ABIE40_RS05680 -2.4 -8.2 cytochrome c maturation protein CcmE compare
ABIE40_RS19065 -2.4 -16.6 MFS transporter compare
ABIE40_RS02405 -2.4 -3.6 response regulator transcription factor compare
ABIE40_RS09540 -2.4 -5.6 peptidylprolyl isomerase compare
ABIE40_RS05660 -2.4 -3.4 response regulator transcription factor compare
ABIE40_RS00935 -2.4 -6.4 ABC transporter substrate-binding protein compare
ABIE40_RS04820 -2.3 -2.4 TetR family transcriptional regulator compare
ABIE40_RS18300 -2.3 -8.4 DsbE family thiol:disulfide interchange protein compare
ABIE40_RS18685 -2.3 -3.5 beta-ketoacyl-ACP reductase compare
ABIE40_RS24380 -2.3 -10.5 FGGY-family carbohydrate kinase compare
ABIE40_RS18290 -2.3 -12.0 heme ABC transporter permease compare
ABIE40_RS18285 -2.3 -4.5 heme exporter protein CcmB compare
ABIE40_RS02590 -2.3 -11.9 FAD-dependent oxidoreductase compare
ABIE40_RS09170 -2.2 -4.9 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS04070 -2.2 -3.9 heme o synthase compare
ABIE40_RS18280 -2.2 -3.3 heme ABC exporter ATP-binding protein CcmA compare
ABIE40_RS04060 -2.2 -11.1 cytochrome c oxidase subunit II compare
ABIE40_RS13370 -2.2 -9.3 CDF family cation efflux transporter EmfA compare
ABIE40_RS14455 -2.1 -2.5 NepR family anti-sigma factor compare
ABIE40_RS04065 -2.1 -11.7 cytochrome c oxidase subunit I compare
ABIE40_RS13125 -2.1 -12.5 cytochrome b N-terminal domain-containing protein compare
ABIE40_RS06915 -2.1 -10.5 COX15/CtaA family protein compare
ABIE40_RS14705 -2.1 -8.5 ABC transporter ATP-binding protein compare
ABIE40_RS28815 -2.0 -6.8 GNAT family N-acetyltransferase compare
ABIE40_RS16660 -2.0 -4.0 GTP-binding protein compare
ABIE40_RS14690 -2.0 -9.9 branched-chain amino acid ABC transporter substrate-binding protein compare
ABIE40_RS08645 -2.0 -6.3 LL-diaminopimelate aminotransferase compare
ABIE40_RS18695 -2.0 -8.2 polyhydroxyalkanoate synthesis repressor PhaR compare
ABIE40_RS08935 -2.0 -3.3 RIP metalloprotease RseP compare
ABIE40_RS02585 -2.0 -11.7 acetyl-CoA C-acetyltransferase compare
ABIE40_RS00925 -2.0 -4.8 ABC transporter permease compare
ABIE40_RS19360 -2.0 -3.9 double-strand break repair helicase AddA compare
ABIE40_RS23940 -1.9 -5.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS11905 -1.9 -4.4 DnaJ family molecular chaperone compare
ABIE40_RS00235 -1.9 -4.2 cytochrome c family protein compare
ABIE40_RS02580 -1.9 -13.0 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS08980 -1.9 -4.7 transcriptional repressor LexA compare
ABIE40_RS07480 -1.9 -6.1 DUF2155 domain-containing protein compare
ABIE40_RS20635 -1.9 -2.7 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
ABIE40_RS16170 -1.9 -2.8 DUF882 domain-containing protein compare
ABIE40_RS22725 -1.9 -5.3 anti-sigma factor compare
ABIE40_RS03515 -1.8 -2.7 glutamate--cysteine ligase compare
ABIE40_RS17515 -1.8 -4.0 TlpA disulfide reductase family protein compare
ABIE40_RS11910 -1.8 -6.0 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
ABIE40_RS14015 -1.8 -8.9 ROK family transcriptional regulator compare
ABIE40_RS25880 -1.8 -6.7 ROK family transcriptional regulator compare
ABIE40_RS08015 -1.8 -1.7 type II toxin-antitoxin system PemK/MazF family toxin compare
ABIE40_RS19615 -1.8 -1.6 DUF1109 domain-containing protein compare
ABIE40_RS05995 -1.8 -7.5 MurR/RpiR family transcriptional regulator compare
ABIE40_RS01015 -1.8 -3.4 NrsF family protein compare
ABIE40_RS05155 -1.7 -3.5 DUF5330 domain-containing protein compare
ABIE40_RS02635 -1.7 -13.0 PAS domain-containing hybrid sensor histidine kinase/response regulator compare
ABIE40_RS11875 -1.7 -1.2 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS07105 -1.7 -1.7 DNA-binding protein HupB compare
ABIE40_RS06220 -1.7 -11.3 citramalate synthase compare
ABIE40_RS16390 -1.7 -1.1 hypothetical protein compare
ABIE40_RS19365 -1.7 -3.2 double-strand break repair protein AddB compare
ABIE40_RS01765 -1.6 -4.3 [protein-PII] uridylyltransferase compare
ABIE40_RS24760 -1.6 -3.1 DeoR/GlpR family DNA-binding transcription regulator compare
ABIE40_RS14710 -1.6 -9.2 high-affinity branched-chain amino acid ABC transporter permease LivM compare
ABIE40_RS02305 -1.6 -4.4 phosphate signaling complex protein PhoU compare
ABIE40_RS09980 -1.5 -1.5 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS29110 -1.5 -2.0 GFA family protein compare
ABIE40_RS21985 -1.5 -4.6 MarR family transcriptional regulator compare
ABIE40_RS06720 -1.5 -2.0 transcriptional regulator NrdR compare
ABIE40_RS04465 -1.5 -9.2 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS02240 -1.5 -5.9 GntR family transcriptional regulator compare
ABIE40_RS01355 -1.5 -7.4 phospholipid N-methyltransferase PmtA compare
ABIE40_RS20315 -1.5 -1.2 type II toxin-antitoxin system VapB family antitoxin compare
ABIE40_RS04475 -1.5 -8.7 phosphoadenylyl-sulfate reductase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Sorbitol in Rhizobium sp. OAE497

For carbon source D-Sorbitol across organisms