Experiment set1IT046 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Nickel (II) chloride hexahydrate 1 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_06330 +1.1 2.2 cation:proton antiporter compare
CA264_02055 +1.1 1.2 hypothetical protein compare
CA264_12910 +0.9 2.1 acyl-CoA-binding protein compare
CA264_21335 +0.8 1.3 hypothetical protein compare
CA264_14925 +0.7 2.5 hypothetical protein compare
CA264_02180 +0.7 1.3 response regulator compare
CA264_20120 +0.7 1.6 hypothetical protein compare
CA264_12300 +0.7 1.8 RNase III inhibitor compare
CA264_13420 +0.7 2.2 hypothetical protein compare
CA264_01545 +0.6 2.3 3-deoxy-7-phosphoheptulonate synthase compare
CA264_03855 +0.6 4.5 magnesium transporter conserved
CA264_19925 +0.6 3.3 peptidyl-prolyl cis-trans isomerase compare
CA264_00935 +0.6 1.8 hypothetical protein compare
CA264_05415 +0.6 2.2 DsbA family protein compare
CA264_15590 +0.6 1.4 metal-dependent hydrolase compare
CA264_15115 +0.6 0.8 hypothetical protein compare
CA264_04290 +0.5 3.4 ABC transporter permease compare
CA264_11715 +0.5 1.7 hypothetical protein compare
CA264_14910 +0.5 1.4 30S ribosomal protein THX compare
CA264_08275 +0.5 3.1 ABC transporter ATP-binding protein compare
CA264_10920 +0.5 3.8 helix-turn-helix-type transcriptional regulator compare
CA264_04300 +0.5 3.8 ABC transporter substrate-binding protein compare
CA264_19135 +0.5 1.3 hypothetical protein compare
CA264_05930 +0.5 1.3 glyoxalase compare
CA264_08130 +0.5 0.8 antibiotic biosynthesis monooxygenase compare
CA264_19815 +0.5 2.0 hypothetical protein compare
CA264_01835 +0.5 1.6 GNAT family N-acetyltransferase compare
CA264_13790 +0.5 2.1 hypothetical protein compare
CA264_10255 +0.5 1.1 hypothetical protein compare
CA264_13145 +0.5 1.4 hypothetical protein compare
CA264_04285 +0.4 1.2 hypothetical protein compare
CA264_04295 +0.4 3.5 hypothetical protein compare
CA264_12005 +0.4 1.2 hypothetical protein compare
CA264_03325 +0.4 1.6 hypothetical protein compare
CA264_20505 +0.4 1.9 hypothetical protein compare
CA264_10695 +0.4 1.1 anti-sigma regulatory factor compare
CA264_20520 +0.4 1.9 hypothetical protein compare
CA264_21225 +0.4 1.0 hypothetical protein compare
CA264_12325 +0.4 3.3 polysaccharide biosynthesis protein compare
CA264_06810 +0.4 0.9 hypothetical protein compare
CA264_16695 +0.4 2.7 heat-shock protein Hsp20 compare
CA264_08805 +0.4 1.5 inosine/xanthosine triphosphatase compare
CA264_01025 +0.4 0.4 hypothetical protein compare
CA264_06845 +0.4 1.1 hypothetical protein compare
CA264_02305 +0.4 1.5 LuxR family transcriptional regulator compare
CA264_06630 +0.4 1.0 hypothetical protein compare
CA264_21630 +0.4 1.3 hypothetical protein compare
CA264_14190 +0.4 1.6 hypothetical protein compare
CA264_09735 +0.4 1.1 5-hydroxyisourate hydrolase compare
CA264_08080 +0.4 1.6 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_17370 +0.4 1.8 hypothetical protein compare
CA264_15180 +0.4 2.7 energy transducer TonB compare
CA264_07605 +0.4 1.6 response regulator compare
CA264_17420 +0.4 1.9 hypothetical protein compare
CA264_08230 +0.4 1.7 TetR family transcriptional regulator compare
CA264_16820 +0.4 1.9 hypothetical protein compare
CA264_14675 +0.4 1.1 hypothetical protein compare
CA264_16925 +0.4 2.1 SAM-dependent methyltransferase compare
CA264_07245 +0.4 1.7 hypothetical protein compare
CA264_03330 +0.4 0.8 peptide-methionine (R)-S-oxide reductase compare
CA264_11695 +0.4 1.4 cell filamentation protein Fic compare
CA264_10005 +0.4 1.0 hypothetical protein compare
CA264_20805 +0.4 1.4 hypothetical protein compare
CA264_18660 +0.4 2.6 T9SS C-terminal target domain-containing protein compare
CA264_06285 +0.4 0.9 N-acetyltransferase compare
CA264_19095 +0.4 1.6 hypothetical protein compare
CA264_14160 +0.4 0.9 HupE / UreJ protein compare
CA264_12160 +0.4 0.8 transcriptional regulator compare
CA264_14625 +0.4 0.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
CA264_14560 +0.4 0.9 VanZ family protein compare
CA264_14405 +0.4 1.4 hypothetical protein compare
CA264_20935 +0.4 0.4 transcriptional regulator compare
CA264_03555 +0.4 2.2 hypothetical protein compare
CA264_15845 +0.4 1.7 hypothetical protein compare
CA264_15070 +0.4 1.7 cytochrome b5 compare
CA264_12890 +0.4 1.4 iron-binding protein compare
CA264_07545 +0.3 2.1 pirin family protein compare
CA264_03915 +0.3 1.6 hydrolase TatD compare
CA264_18480 +0.3 0.5 hypothetical protein compare
CA264_06240 +0.3 1.8 acetylornithine carbamoyltransferase compare
CA264_08100 +0.3 1.5 ABC transporter ATP-binding protein compare
CA264_15190 +0.3 1.0 hypothetical protein compare
CA264_04305 +0.3 2.9 hypothetical protein compare
CA264_14060 +0.3 1.8 ATP-binding protein compare
CA264_11745 +0.3 2.0 hypothetical protein compare
CA264_09420 +0.3 1.6 maltose acetyltransferase compare
CA264_07585 +0.3 1.5 hypothetical protein compare
CA264_17205 +0.3 0.7 diacylglycerol kinase compare
CA264_18880 +0.3 1.1 hypothetical protein compare
CA264_08415 +0.3 1.9 hypothetical protein compare
CA264_20115 +0.3 2.0 phosphoribosylamine--glycine ligase compare
CA264_03670 +0.3 1.2 polyisoprenoid-binding protein compare
CA264_06250 +0.3 0.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
CA264_10715 +0.3 1.0 hypothetical protein compare
CA264_17390 +0.3 1.0 hypothetical protein compare
CA264_17415 +0.3 1.7 hypothetical protein compare
CA264_20530 +0.3 1.7 hypothetical protein compare
CA264_01035 +0.3 1.6 hypothetical protein compare
CA264_10780 +0.3 1.7 hypothetical protein compare
CA264_00700 +0.3 2.3 hypothetical protein compare
CA264_05505 +0.3 1.8 hypothetical protein compare
CA264_05615 +0.3 1.5 NUDIX hydrolase compare
CA264_03400 +0.3 1.2 hypothetical protein compare
CA264_19710 +0.3 1.3 short-chain dehydrogenase compare
CA264_20245 +0.3 1.6 hypothetical protein compare
CA264_12950 +0.3 1.8 peptidase S8 compare
CA264_01225 +0.3 1.9 X-Pro dipeptidyl-peptidase compare
CA264_02920 +0.3 1.5 response regulator compare
CA264_20915 +0.3 1.2 DNA repair protein compare
CA264_21570 +0.3 1.3 hypothetical protein compare
CA264_16415 +0.3 0.7 hypothetical protein compare
CA264_08780 +0.3 2.3 hypothetical protein compare
CA264_06180 +0.3 1.9 pseudouridylate synthase compare
CA264_02025 +0.3 1.9 nitroreductase compare
CA264_03785 +0.3 1.5 translation initiation factor compare
CA264_12245 +0.3 1.3 ABC transporter permease compare
CA264_12965 +0.3 1.4 hypothetical protein compare
CA264_07650 +0.3 1.7 hypothetical protein compare
CA264_03170 +0.3 0.5 hypothetical protein compare
CA264_13085 +0.3 2.0 methylmalonyl-CoA carboxyltransferase compare
CA264_00245 +0.3 1.0 hypothetical protein compare
CA264_15235 +0.3 2.1 hypothetical protein compare
CA264_00560 +0.3 1.4 hypothetical protein compare
CA264_04700 +0.3 2.5 cyanophycin synthetase compare
CA264_12155 +0.3 0.8 histidine phosphatase family protein compare
CA264_14110 +0.3 0.7 phosphoribosyltransferase compare
CA264_19215 +0.3 1.2 RNA polymerase subunit sigma compare
CA264_06860 +0.3 0.7 cytochrome C compare
CA264_16580 +0.3 1.0 aminoacyl-tRNA hydrolase compare
CA264_08870 +0.3 1.1 imidazolonepropionase compare
CA264_02680 +0.3 0.8 RNA polymerase subunit sigma-70 compare
CA264_02795 +0.3 1.1 hypothetical protein compare
CA264_08615 +0.3 1.1 hypothetical protein compare
CA264_05410 +0.3 1.4 hypothetical protein compare
CA264_21305 +0.3 0.6 hypothetical protein compare
CA264_13350 +0.3 1.5 hypothetical protein compare
CA264_12180 +0.3 1.6 hypothetical protein compare
CA264_13015 +0.3 2.2 sensor histidine kinase compare
CA264_05545 +0.3 1.5 tropinone reductase compare
CA264_16165 +0.3 1.8 hypothetical protein compare
CA264_13720 +0.3 1.4 hypothetical protein compare
CA264_20570 +0.3 0.6 inorganic pyrophosphatase compare
CA264_15730 +0.3 1.5 hypothetical protein compare
CA264_10565 +0.3 1.6 cation transporter compare
CA264_09330 +0.3 1.5 cold-shock protein compare
CA264_15920 +0.3 1.4 hypothetical protein compare
CA264_07315 +0.3 0.9 DNA-binding response regulator compare
CA264_19705 +0.3 1.4 GNAT family N-acetyltransferase compare
CA264_05420 +0.3 1.7 hypothetical protein compare
CA264_15600 +0.3 1.3 tRNA glutamyl-Q synthetase compare
CA264_15780 +0.3 1.2 SAM-dependent methyltransferase compare
CA264_01020 +0.3 1.6 hypothetical protein compare
CA264_16600 +0.3 1.7 alpha/beta hydrolase compare
CA264_18750 +0.3 1.5 FmdC precursor compare
CA264_13825 +0.3 0.6 hypothetical protein compare
CA264_08330 +0.3 1.4 hypothetical protein compare
CA264_09820 +0.3 0.9 hypothetical protein compare
CA264_03895 +0.3 1.4 hypothetical protein compare
CA264_21195 +0.3 1.1 hypothetical protein compare
CA264_14950 +0.3 1.7 hypothetical protein compare
CA264_02690 +0.3 1.3 rhodanese compare
CA264_12520 +0.3 1.6 sodium:proton exchanger compare
CA264_03850 +0.3 0.8 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase compare
CA264_01205 +0.3 1.5 hypothetical protein compare
CA264_07075 +0.3 1.4 hypothetical protein compare
CA264_17345 +0.3 2.0 ABC transporter ATP-binding protein compare
CA264_00825 +0.3 1.2 methyltransferase compare
CA264_09815 +0.3 0.4 hypothetical protein compare
CA264_10445 +0.3 1.1 hypothetical protein compare
CA264_17905 +0.3 1.4 UDP-glucose 4-epimerase GalE compare
CA264_07900 +0.3 1.1 hypothetical protein compare
CA264_08635 +0.3 1.6 hypothetical protein compare
CA264_17985 +0.3 1.5 hypothetical protein compare
CA264_04250 +0.3 1.7 NADH oxidoreductase (quinone) subunit F compare
CA264_20470 +0.3 1.5 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase compare
CA264_01585 +0.3 1.6 hypothetical protein compare
CA264_20125 +0.3 1.2 hypothetical protein compare
CA264_16865 +0.3 1.0 hypothetical protein compare
CA264_14940 +0.3 1.2 hypothetical protein compare
CA264_17160 +0.3 1.6 ketosteroid isomerase compare
CA264_15400 +0.2 1.3 short-chain dehydrogenase compare
CA264_11665 +0.2 1.2 DDE transposase compare
CA264_00295 +0.2 1.0 hypothetical protein compare
CA264_11345 +0.2 1.6 aquaporin compare
CA264_18245 +0.2 0.6 NADH-quinone oxidoreductase subunit A compare
CA264_16880 +0.2 1.6 hypothetical protein compare
CA264_07485 +0.2 1.2 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_21440 +0.2 0.9 metal transporter compare
CA264_15680 +0.2 1.4 hypothetical protein compare
CA264_02605 +0.2 1.0 hypothetical protein compare
CA264_12735 +0.2 1.2 hypothetical protein compare
CA264_19130 +0.2 0.7 DUF2798 domain-containing protein compare
CA264_15005 +0.2 1.5 magnesium/cobalt efflux protein compare
CA264_07865 +0.2 1.7 hypothetical protein compare
CA264_15045 +0.2 1.3 acetyl-CoA acetyltransferase compare
CA264_16365 +0.2 0.7 gliding motility protein GldL compare
CA264_02645 +0.2 1.4 hypothetical protein compare
CA264_15580 +0.2 1.3 phospholipase compare
CA264_20945 +0.2 0.6 hypothetical protein compare
CA264_06265 +0.2 1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Nickel (II) chloride hexahydrate across organisms