Experiment set1IT045 for Rhizobium sp. OAE497

Compare to:

Ethanol carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS02340 -6.7 -4.7 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS19355 -6.7 -4.6 thioredoxin compare
ABIE40_RS18590 -6.6 -7.8 homoserine O-succinyltransferase compare
ABIE40_RS11950 -6.4 -4.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS18380 -6.2 -10.4 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS19050 -6.0 -9.2 3-isopropylmalate dehydrogenase compare
ABIE40_RS17525 -6.0 -3.2 lipoprotein compare
ABIE40_RS00245 -5.9 -10.6 prephenate dehydratase compare
ABIE40_RS09095 -5.7 -3.9 PAS domain-containing sensor histidine kinase compare
ABIE40_RS13330 -5.6 -12.4 2-isopropylmalate synthase compare
ABIE40_RS18775 -5.5 -13.4 pyruvate carboxylase compare
ABIE40_RS06555 -5.5 -3.0 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS19040 -5.4 -6.5 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS08635 -5.4 -3.7 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS09545 -5.4 -3.4 anthranilate phosphoribosyltransferase compare
ABIE40_RS17530 -5.2 -3.6 diaminopimelate decarboxylase compare
ABIE40_RS16320 -5.2 -3.6 histidinol-phosphatase compare
ABIE40_RS03665 -5.1 -3.6 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.1 -3.5 histidinol dehydrogenase compare
ABIE40_RS10725 -5.1 -3.5 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS20460 -5.0 -3.4 precorrin-3B synthase compare
ABIE40_RS03660 -5.0 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS02325 -5.0 -3.4 ornithine carbamoyltransferase compare
ABIE40_RS19435 -4.9 -2.7 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS10720 -4.8 -3.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.8 -3.3 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11105 -4.7 -3.3 cobyrinate a,c-diamide synthase compare
ABIE40_RS18920 -4.7 -4.0 glutamate 5-kinase compare
ABIE40_RS09725 -4.7 -3.2 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS11175 -4.7 -3.2 cobyric acid synthase compare
ABIE40_RS18925 -4.6 -4.5 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS10180 -4.6 -3.2 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06270 -4.6 -4.5 amidophosphoribosyltransferase compare
ABIE40_RS09150 -4.6 -17.4 nitrite/sulfite reductase compare
ABIE40_RS19330 -4.6 -3.1 phosphoribosylanthranilate isomerase compare
ABIE40_RS06560 -4.6 -3.1 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS13410 -4.6 -3.1 anthranilate synthase compare
ABIE40_RS16390 -4.5 -1.4 hypothetical protein compare
ABIE40_RS11165 -4.5 -2.8 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS09155 -4.5 -5.3 DUF934 domain-containing protein compare
ABIE40_RS20440 -4.4 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS19440 -4.4 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS16655 -4.4 -7.3 creatininase family protein compare
ABIE40_RS20435 -4.4 -3.0 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS02320 -4.3 -3.0 aspartate aminotransferase family protein compare
ABIE40_RS01930 -4.3 -2.3 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS11095 -4.3 -2.9 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS11495 -4.3 -4.1 acetolactate synthase 3 large subunit compare
ABIE40_RS00595 -4.2 -9.5 glucokinase compare
ABIE40_RS01970 -4.2 -4.1 acetylglutamate kinase compare
ABIE40_RS17595 -4.2 -2.9 histidinol-phosphate transaminase compare
ABIE40_RS14980 -4.2 -2.9 glycoside hydrolase family 16 protein compare
ABIE40_RS19450 -4.2 -2.9 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS09090 -4.2 -6.9 nitrogen regulation protein NR(I) compare
ABIE40_RS11150 -4.1 -9.2 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS06930 -4.1 -4.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS12925 -4.1 -12.9 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS11155 -4.1 -4.0 cobaltochelatase subunit CobN compare
ABIE40_RS20455 -4.1 -2.2 precorrin-8X methylmutase compare
ABIE40_RS20450 -4.1 -3.9 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS06730 -4.0 -6.0 riboflavin synthase compare
ABIE40_RS19130 -4.0 -2.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS20430 -4.0 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS15345 -4.0 -9.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS08005 -3.9 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS20465 -3.9 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS14985 -3.9 -2.4 glycosyltransferase compare
ABIE40_RS03405 -3.8 -2.6 anti-sigma factor compare
ABIE40_RS09360 -3.8 -6.3 excinuclease ABC subunit UvrA compare
ABIE40_RS05155 -3.8 -5.7 DUF5330 domain-containing protein compare
ABIE40_RS12135 -3.8 -2.6 methionine synthase compare
ABIE40_RS19445 -3.8 -2.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS10390 -3.7 -2.6 2Fe-2S iron-sulfur cluster-binding protein compare
ABIE40_RS17645 -3.7 -2.6 cobaltochelatase subunit CobT compare
ABIE40_RS09660 -3.6 -11.5 AI-2E family transporter compare
ABIE40_RS17650 -3.6 -6.2 cobaltochelatase subunit CobS compare
ABIE40_RS19260 -3.5 -2.4 DNA polymerase III subunit epsilon compare
ABIE40_RS05430 -3.5 -2.4 phosphoribosylamine--glycine ligase compare
ABIE40_RS00930 -3.4 -7.6 ABC transporter permease compare
ABIE40_RS19395 -3.4 -3.8 PTS sugar transporter subunit IIA compare
ABIE40_RS14990 -3.3 -11.6 glycosyltransferase family 2 protein compare
ABIE40_RS06050 -3.3 -7.0 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS17590 -3.3 -2.3 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS10155 -3.3 -2.0 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS18880 -3.3 -14.2 UDP-glucose 4-epimerase GalE compare
ABIE40_RS00725 -3.2 -5.3 DNA cytosine methyltransferase compare
ABIE40_RS20445 -3.1 -1.4 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS19480 -3.1 -3.0 DUF1402 family protein compare
ABIE40_RS05625 -3.1 -1.9 phage tail tape measure protein compare
ABIE40_RS00935 -3.0 -6.4 ABC transporter substrate-binding protein compare
ABIE40_RS08645 -3.0 -7.1 LL-diaminopimelate aminotransferase compare
ABIE40_RS10345 -3.0 -6.0 RNA polymerase-binding protein DksA compare
ABIE40_RS14955 -3.0 -9.3 sugar transferase compare
ABIE40_RS04470 -2.9 -14.2 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS08500 -2.9 -2.4 preprotein translocase subunit YajC compare
ABIE40_RS08935 -2.9 -4.0 RIP metalloprotease RseP compare
ABIE40_RS09140 -2.9 -7.2 siroheme synthase CysG compare
ABIE40_RS18055 -2.9 -3.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS01765 -2.9 -6.3 [protein-PII] uridylyltransferase compare
ABIE40_RS16570 -2.7 -2.8 tetratricopeptide repeat protein compare
ABIE40_RS17565 -2.7 -2.9 ABC transporter permease compare
ABIE40_RS04475 -2.7 -11.2 phosphoadenylyl-sulfate reductase compare
ABIE40_RS00580 -2.7 -2.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS16490 -2.7 -9.5 glycogen synthase GlgA compare
ABIE40_RS01055 -2.7 -6.4 translation elongation factor 4 compare
ABIE40_RS09720 -2.7 -4.0 GTP cyclohydrolase I FolE compare
ABIE40_RS06725 -2.6 -4.6 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS03190 -2.6 -5.5 phosphogluconate dehydratase compare
ABIE40_RS04465 -2.6 -11.9 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS19265 -2.6 -2.3 protein-export chaperone SecB compare
ABIE40_RS07105 -2.6 -2.4 DNA-binding protein HupB compare
ABIE40_RS18970 -2.5 -3.8 murein hydrolase activator EnvC compare
ABIE40_RS16070 -2.5 -3.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS12360 -2.4 -10.1 DUF5131 family protein compare
ABIE40_RS07740 -2.4 -2.2 elongation factor Tu compare
ABIE40_RS24490 -2.3 -1.5 flavin reductase compare
ABIE40_RS08425 -2.3 -2.6 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS13370 -2.3 -8.7 CDF family cation efflux transporter EmfA compare
ABIE40_RS28420 -2.2 -1.8 30S ribosomal protein S21 compare
ABIE40_RS18685 -2.2 -3.2 beta-ketoacyl-ACP reductase compare
ABIE40_RS18640 -2.1 -8.3 M48 family metalloprotease compare
ABIE40_RS09145 -2.1 -4.2 DUF2849 domain-containing protein compare
ABIE40_RS07475 -2.1 -2.2 NADH:ubiquinone oxidoreductase subunit NDUFA12 compare
ABIE40_RS11060 -2.1 -4.6 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS09540 -2.1 -4.3 peptidylprolyl isomerase compare
ABIE40_RS11875 -2.1 -2.5 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABIE40_RS00340 -2.0 -3.2 30S ribosome-binding factor RbfA compare
ABIE40_RS16210 -2.0 -7.6 homospermidine synthase compare
ABIE40_RS28815 -2.0 -5.8 GNAT family N-acetyltransferase compare
ABIE40_RS30775 -2.0 -1.5 ferritin-like domain-containing protein compare
ABIE40_RS19385 -1.9 -5.3 adenosylhomocysteinase compare
ABIE40_RS06720 -1.9 -1.8 transcriptional regulator NrdR compare
ABIE40_RS20055 -1.9 -2.0 sugar phosphate isomerase/epimerase compare
ABIE40_RS09980 -1.9 -2.4 Fe-S cluster assembly scaffold SufA compare
ABIE40_RS10200 -1.9 -2.1 Grx4 family monothiol glutaredoxin compare
ABIE40_RS12845 -1.9 -2.2 glycosyltransferase family 4 protein compare
ABIE40_RS21990 -1.8 -1.0 organic hydroperoxide resistance protein compare
ABIE40_RS03515 -1.8 -2.7 glutamate--cysteine ligase compare
ABIE40_RS19700 -1.8 -3.1 MBL fold metallo-hydrolase compare
ABIE40_RS23000 -1.8 -4.1 TetR/AcrR family transcriptional regulator compare
ABIE40_RS06645 -1.8 -1.5 hypothetical protein compare
ABIE40_RS05025 -1.7 -2.4 MucR family transcriptional regulator compare
ABIE40_RS08140 -1.7 -9.1 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS08970 -1.7 -6.4 citrate synthase compare
ABIE40_RS01245 -1.7 -3.7 2'-5' RNA ligase family protein compare
ABIE40_RS27585 -1.7 -1.7 hypothetical protein compare
ABIE40_RS00490 -1.7 -7.5 DNA polymerase I compare
ABIE40_RS18255 -1.7 -1.6 hypothetical protein compare
ABIE40_RS19360 -1.7 -3.7 double-strand break repair helicase AddA compare
ABIE40_RS04115 -1.6 -1.5 ribonuclease HI compare
ABIE40_RS10935 -1.6 -1.6 Fur family transcriptional regulator compare
ABIE40_RS04215 -1.6 -1.9 sensor domain-containing phosphodiesterase compare
ABIE40_RS15010 -1.6 -7.4 metallophosphoesterase compare
ABIE40_RS00960 -1.6 -2.5 formyltetrahydrofolate deformylase compare
ABIE40_RS15855 -1.6 -2.7 cell division protein ZapA compare
ABIE40_RS05670 -1.6 -4.9 membrane protein compare
ABIE40_RS22100 -1.6 -1.0 helix-turn-helix domain-containing protein compare
ABIE40_RS17290 -1.6 -5.7 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS05660 -1.6 -3.0 response regulator transcription factor compare
ABIE40_RS30705 -1.5 -1.8 hypothetical protein compare
ABIE40_RS09425 -1.5 -3.7 peptidylprolyl isomerase compare
ABIE40_RS11960 -1.5 -2.1 energy-dependent translational throttle protein EttA compare
ABIE40_RS10755 -1.5 -1.7 hypothetical protein compare
ABIE40_RS06775 -1.5 -2.2 DUF177 domain-containing protein compare
ABIE40_RS17010 -1.5 -5.7 sugar ABC transporter permease compare
ABIE40_RS11085 -1.5 -2.8 acyl carrier protein compare
ABIE40_RS18720 -1.5 -1.4 polyprenyl synthetase family protein compare
ABIE40_RS19245 -1.4 -2.8 Maf-like protein compare
ABIE40_RS05665 -1.4 -2.7 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS13285 -1.4 -2.9 N-acetyltransferase compare
ABIE40_RS17000 -1.4 -3.3 ABC transporter ATP-binding protein compare
ABIE40_RS19645 -1.4 -6.8 acyltransferase compare
ABIE40_RS15760 -1.4 -4.0 Holliday junction branch migration DNA helicase RuvB compare
ABIE40_RS18770 -1.4 -1.9 amino acid ABC transporter ATP-binding protein compare
ABIE40_RS08865 -1.4 -5.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS06145 -1.4 -4.5 folate-binding protein YgfZ compare
ABIE40_RS06220 -1.4 -8.3 citramalate synthase compare
ABIE40_RS18735 -1.4 -4.2 TetR/AcrR family transcriptional regulator compare
ABIE40_RS14850 -1.3 -5.8 UDP-glucose/GDP-mannose dehydrogenase family protein compare
ABIE40_RS03170 -1.3 -7.4 carbohydrate ABC transporter permease compare
ABIE40_RS24310 -1.3 -3.7 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS15940 -1.3 -1.6 YegP family protein compare
ABIE40_RS11490 -1.3 -4.3 acetolactate synthase small subunit compare
ABIE40_RS22300 -1.3 -3.6 superoxide dismutase compare
ABIE40_RS18290 -1.3 -6.4 heme ABC transporter permease compare
ABIE40_RS03160 -1.3 -8.4 ABC transporter substrate-binding protein compare
ABIE40_RS03815 -1.3 -1.3 DUF6101 family protein compare
ABIE40_RS16055 -1.3 -2.5 DUF465 domain-containing protein compare
ABIE40_RS10140 -1.3 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS22660 -1.3 -2.4 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
ABIE40_RS20035 -1.3 -4.5 ABC transporter ATP-binding protein compare
ABIE40_RS27215 -1.3 -1.0 3'-5' exonuclease compare
ABIE40_RS03180 -1.3 -7.5 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
ABIE40_RS00450 -1.2 -3.2 molecular chaperone DnaJ compare
ABIE40_RS18615 -1.2 -1.7 MarR family transcriptional regulator compare
ABIE40_RS09085 -1.2 -3.5 nitrogen regulation protein NR(II) compare
ABIE40_RS00925 -1.2 -2.9 ABC transporter permease compare
ABIE40_RS03165 -1.2 -5.1 sugar ABC transporter permease compare
ABIE40_RS29780 -1.2 -1.7 hypothetical protein compare
ABIE40_RS10850 -1.2 -3.1 excinuclease ABC subunit UvrB compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source Ethanol in Rhizobium sp. OAE497

For carbon source Ethanol across organisms