Experiment set1IT045 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth

200 most detrimental genes:

  gene name fitness t score description  
CA264_19925 +1.1 7.3 peptidyl-prolyl cis-trans isomerase compare
CA264_14805 +1.0 3.0 DNA-binding protein compare
CA264_18945 +0.8 1.6 hypothetical protein compare
CA264_21460 +0.8 1.3 hypothetical protein compare
CA264_17095 +0.7 2.4 FeoB-associated Cys-rich membrane protein compare
CA264_02180 +0.7 1.2 response regulator compare
CA264_01545 +0.7 1.9 3-deoxy-7-phosphoheptulonate synthase compare
CA264_06330 +0.7 2.9 cation:proton antiporter compare
CA264_01025 +0.6 1.1 hypothetical protein compare
CA264_06070 +0.6 0.9 kinase compare
CA264_00905 +0.6 2.2 hypothetical protein compare
CA264_09815 +0.6 1.0 hypothetical protein compare
CA264_15515 +0.6 3.6 peptidase compare
CA264_15045 +0.6 3.3 acetyl-CoA acetyltransferase compare
CA264_21300 +0.6 1.0 hypothetical protein compare
CA264_12440 +0.6 1.1 methionyl-tRNA formyltransferase compare
CA264_01180 +0.6 2.1 hypothetical protein compare
CA264_20980 +0.6 2.6 conjugal transfer protein compare
CA264_18345 +0.6 0.7 hypothetical protein compare
CA264_17905 +0.6 3.2 UDP-glucose 4-epimerase GalE compare
CA264_03800 +0.6 2.4 hypothetical protein compare
CA264_09330 +0.6 1.4 cold-shock protein compare
CA264_12240 +0.6 3.0 ABC transporter ATP-binding protein compare
CA264_21225 +0.5 1.0 hypothetical protein compare
CA264_12350 +0.5 3.3 glycosyltransferase family 1 protein compare
CA264_13865 +0.5 1.2 hypothetical protein compare
CA264_08250 +0.5 1.8 hypothetical protein compare
CA264_06530 +0.5 2.2 peptidase compare
CA264_02715 +0.5 1.8 UDP-glucose--dolichyl-phosphate glucosyltransferase compare
CA264_02415 +0.5 1.5 dethiobiotin synthase compare
CA264_04385 +0.5 1.9 hypothetical protein compare
CA264_05415 +0.5 1.6 DsbA family protein compare
CA264_18515 +0.5 2.1 GntR family transcriptional regulator compare
CA264_11665 +0.5 1.9 DDE transposase compare
CA264_09730 +0.5 1.7 hypothetical protein compare
CA264_12405 +0.5 3.4 hypothetical protein compare
CA264_17065 +0.5 1.8 hypothetical protein compare
CA264_21050 +0.5 2.3 hypothetical protein compare
CA264_06610 +0.5 1.5 iron-dependent repressor compare
CA264_20120 +0.5 1.1 hypothetical protein compare
CA264_16330 +0.5 2.7 hypothetical protein compare
CA264_15150 +0.5 1.3 hypothetical protein compare
CA264_01395 +0.5 1.0 6-carboxytetrahydropterin synthase QueD compare
CA264_19135 +0.5 1.8 hypothetical protein compare
CA264_11970 +0.5 1.0 hypothetical protein compare
CA264_15180 +0.5 2.6 energy transducer TonB compare
CA264_15425 +0.4 1.0 DUF4834 domain-containing protein compare
CA264_02595 +0.4 1.5 oxidoreductase compare
CA264_09915 +0.4 1.3 hypothetical protein compare
CA264_06055 +0.4 2.0 DNA recombination protein RmuC compare
CA264_10005 +0.4 1.2 hypothetical protein compare
CA264_04525 +0.4 2.4 DUF2279 domain-containing protein compare
CA264_18880 +0.4 1.8 hypothetical protein compare
CA264_20570 +0.4 1.0 inorganic pyrophosphatase compare
CA264_01035 +0.4 1.4 hypothetical protein compare
CA264_14885 +0.4 1.3 hypothetical protein compare
CA264_20925 +0.4 0.7 hypothetical protein compare
CA264_05930 +0.4 0.8 glyoxalase compare
CA264_08550 +0.4 2.0 hypothetical protein compare
CA264_10870 +0.4 0.9 division/cell wall cluster transcriptional repressor MraZ compare
CA264_21085 +0.4 2.3 hypothetical protein compare
CA264_11985 +0.4 1.5 dipeptidase E compare
CA264_10520 +0.4 1.1 molybdopterin synthase sulfur carrier subunit compare
CA264_00715 +0.4 3.1 hypothetical protein compare
CA264_01805 +0.4 0.8 6-phosphogluconate dehydrogenase (decarboxylating) compare
CA264_08275 +0.4 1.7 ABC transporter ATP-binding protein compare
CA264_07645 +0.4 2.0 hypothetical protein compare
CA264_04250 +0.4 2.0 NADH oxidoreductase (quinone) subunit F compare
CA264_10275 +0.4 1.2 transcriptional regulator compare
CA264_00705 +0.4 1.5 hypothetical protein compare
CA264_17345 +0.4 2.7 ABC transporter ATP-binding protein compare
CA264_01855 +0.4 1.4 carbonic anhydrase compare
CA264_14140 +0.4 2.3 esterase compare
CA264_01480 +0.4 1.9 dihydroorotase compare
CA264_07520 +0.4 2.5 DNA-binding response regulator compare
CA264_16440 +0.4 0.9 hypothetical protein compare
CA264_03485 +0.4 1.7 dodecin compare
CA264_10185 +0.4 2.0 hypothetical protein compare
CA264_04290 +0.4 2.8 ABC transporter permease compare
CA264_14200 +0.4 0.7 NADH-quinone oxidoreductase subunit A compare
CA264_05025 +0.4 1.8 ATP phosphoribosyltransferase compare
CA264_04300 +0.4 2.6 ABC transporter substrate-binding protein compare
CA264_01065 +0.4 1.3 MarR family transcriptional regulator compare
CA264_20275 +0.4 1.5 DNA-binding protein compare
CA264_12400 +0.4 2.5 hypothetical protein compare
CA264_19700 +0.4 2.2 hypothetical protein compare
CA264_15040 +0.4 1.8 four helix bundle protein compare
CA264_13480 +0.4 0.9 hypothetical protein compare
CA264_15930 +0.4 2.2 thiol reductase thioredoxin compare
CA264_07620 +0.4 1.9 hypothetical protein compare
CA264_06205 +0.4 2.3 glutamate--cysteine ligase compare
CA264_08435 +0.4 1.4 transcription elongation factor GreAB compare
CA264_06195 +0.4 1.7 YqaE/Pmp3 family membrane protein compare
CA264_20285 +0.4 0.6 hypothetical protein compare
CA264_12325 +0.4 2.7 polysaccharide biosynthesis protein compare
CA264_19990 +0.4 2.0 hypothetical protein compare
CA264_04185 +0.4 1.3 phosphatidylethanolamine-binding protein compare
CA264_13085 +0.4 2.4 methylmalonyl-CoA carboxyltransferase compare
CA264_18215 +0.4 0.8 hypothetical protein compare
CA264_04295 +0.4 2.6 hypothetical protein compare
CA264_17790 +0.4 1.9 hypothetical protein compare
CA264_02880 +0.4 0.7 hypothetical protein compare
CA264_03405 +0.4 1.5 hypothetical protein compare
CA264_20420 +0.4 1.8 thiazole synthase compare
CA264_10585 +0.3 1.9 hypothetical protein compare
CA264_19175 +0.3 2.3 hypothetical protein compare
CA264_17800 +0.3 1.2 tRNA-Val compare
CA264_15335 +0.3 3.2 SusC/RagA family TonB-linked outer membrane protein compare
CA264_03870 +0.3 1.9 transcription elongation factor GreA compare
CA264_17370 +0.3 1.6 hypothetical protein compare
CA264_17090 +0.3 2.3 inositol monophosphatase compare
CA264_15500 +0.3 1.3 hypothetical protein compare
CA264_20125 +0.3 2.0 hypothetical protein compare
CA264_11685 +0.3 1.4 hypothetical protein compare
CA264_00765 +0.3 1.7 hypothetical protein compare
CA264_12355 +0.3 2.1 polysaccharide deacetylase compare
CA264_20460 +0.3 1.2 hypothetical protein compare
CA264_01425 +0.3 2.7 RelA/SpoT family protein compare
CA264_08330 +0.3 1.7 hypothetical protein compare
CA264_01865 +0.3 0.6 polyisoprenoid-binding protein compare
CA264_03890 +0.3 1.8 family 2 glycosyl transferase compare
CA264_08610 +0.3 2.0 NCS2 family permease compare
CA264_07260 +0.3 1.6 hypothetical protein compare
CA264_07485 +0.3 0.9 septal ring lytic transglycosylase RlpA family lipoprotein compare
CA264_06995 +0.3 1.8 fatty acid hydroxylase compare
CA264_14280 +0.3 1.8 hypothetical protein compare
CA264_07335 +0.3 1.3 transcriptional regulator compare
CA264_19030 +0.3 1.3 ribosomal subunit interface protein compare
CA264_18110 +0.3 1.4 hypothetical protein compare
CA264_00940 +0.3 1.1 hypothetical protein compare
CA264_12215 +0.3 1.3 cupin compare
CA264_20490 +0.3 0.7 hypothetical protein compare
CA264_15970 +0.3 1.4 hypothetical protein compare
CA264_02960 +0.3 1.6 glycosyltransferase compare
CA264_18360 +0.3 1.4 osmotically inducible protein OsmC compare
CA264_16100 +0.3 0.7 hypothetical protein compare
CA264_12335 +0.3 2.1 pyridoxal phosphate-dependent aminotransferase compare
CA264_20455 +0.3 2.0 LLM class flavin-dependent oxidoreductase compare
CA264_03320 +0.3 1.3 hypothetical protein compare
CA264_13860 +0.3 1.0 hypothetical protein compare
CA264_04905 +0.3 2.6 acetyl-CoA carboxylase biotin carboxylase subunit compare
CA264_09370 +0.3 1.7 amidase compare
CA264_16695 +0.3 1.3 heat-shock protein Hsp20 compare
CA264_17885 +0.3 0.4 GAF domain-containing protein compare
CA264_08780 +0.3 2.1 hypothetical protein compare
CA264_20440 +0.3 0.5 thiamine biosynthesis protein ThiS compare
CA264_10070 +0.3 1.3 hypothetical protein compare
CA264_02465 +0.3 1.2 hypothetical protein compare
CA264_05505 +0.3 1.4 hypothetical protein compare
CA264_12195 +0.3 1.0 DoxX family protein compare
CA264_20520 +0.3 1.1 hypothetical protein compare
CA264_04305 +0.3 2.6 hypothetical protein compare
CA264_09110 +0.3 1.1 mechanosensitive ion channel protein MscS compare
CA264_15650 +0.3 1.0 hypothetical protein compare
CA264_00780 +0.3 0.6 glyoxalase compare
CA264_12795 +0.3 1.4 hypothetical protein compare
CA264_05135 +0.3 2.0 amidohydrolase compare
CA264_03950 +0.3 1.0 4-carboxymuconolactone decarboxylase compare
CA264_10205 +0.3 2.3 hypothetical protein compare
CA264_13215 +0.3 1.0 hypothetical protein compare
CA264_08680 +0.3 1.7 glycoside hydrolase compare
CA264_12435 +0.3 1.4 GlcNAc-PI de-N-acetylase compare
CA264_13880 +0.3 1.3 hypothetical protein compare
CA264_12620 +0.3 1.3 cytochrome C compare
CA264_04285 +0.3 0.6 hypothetical protein compare
CA264_13840 +0.3 1.9 metallophosphatase compare
CA264_12365 +0.3 2.3 asparagine synthetase B compare
CA264_02575 +0.3 1.1 potassium transporter KefB compare
CA264_00935 +0.3 0.8 hypothetical protein compare
CA264_08560 +0.3 2.1 adenylyl-sulfate kinase compare
CA264_03610 +0.3 1.2 hypothetical protein compare
CA264_12370 +0.3 2.1 hypothetical protein compare
CA264_01695 +0.3 1.8 glutathionylspermidine synthase compare
CA264_13900 +0.3 1.7 transcriptional regulator compare
CA264_20075 +0.3 1.9 hypothetical protein compare
CA264_00245 +0.3 1.0 hypothetical protein compare
CA264_09305 +0.3 1.3 copper homeostasis protein compare
CA264_14600 +0.3 1.8 serine hydrolase compare
CA264_09430 +0.3 1.1 2-isopropylmalate synthase compare
CA264_20505 +0.3 1.1 hypothetical protein compare
CA264_04270 +0.3 1.4 NADH:ubiquinone oxidoreductase subunit A compare
CA264_06925 +0.3 1.0 acetolactate synthase small subunit compare
CA264_02630 +0.3 0.7 carbonic anhydrase compare
CA264_00815 +0.3 1.0 cytidine deaminase compare
CA264_12850 +0.3 1.2 hypothetical protein compare
CA264_15870 +0.3 1.5 long-chain fatty acid--CoA ligase compare
CA264_01595 +0.3 1.1 hypothetical protein compare
CA264_19955 +0.3 1.2 SAM-dependent methyltransferase compare
CA264_07650 +0.3 1.7 hypothetical protein compare
CA264_14110 +0.3 0.9 phosphoribosyltransferase compare
CA264_17200 +0.3 1.3 peptide-methionine (S)-S-oxide reductase compare
CA264_20950 +0.3 0.6 hypothetical protein compare
CA264_04685 +0.3 1.2 HNH endonuclease compare
CA264_06250 +0.3 1.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
CA264_20495 +0.3 1.3 DNA polymerase/3'-5' exonuclease PolX compare
CA264_03325 +0.3 0.9 hypothetical protein compare
CA264_21175 +0.3 0.9 STAS/SEC14 domain-containing protein compare
CA264_13660 +0.3 1.4 putative DNA modification/repair radical SAM protein compare
CA264_04170 +0.3 1.6 cation transporter compare
CA264_06750 +0.3 1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in marine broth experiments