Experiment set1IT044 for Rhizobium sp. OAE497

Compare to:

Ethanol carbon source

200 most important genes:

  gene name fitness t score description  
ABIE40_RS18920 -6.9 -4.8 glutamate 5-kinase compare
ABIE40_RS00245 -6.9 -4.8 prephenate dehydratase compare
ABIE40_RS02340 -6.9 -4.8 O-succinylhomoserine sulfhydrylase compare
ABIE40_RS18380 -6.8 -4.7 3-isopropylmalate dehydratase large subunit compare
ABIE40_RS11950 -6.6 -4.6 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE40_RS18590 -6.4 -11.5 homoserine O-succinyltransferase compare
ABIE40_RS19040 -6.2 -4.3 3-isopropylmalate dehydratase small subunit compare
ABIE40_RS17525 -6.1 -3.3 lipoprotein compare
ABIE40_RS13330 -6.0 -9.2 2-isopropylmalate synthase compare
ABIE40_RS09155 -5.9 -5.7 DUF934 domain-containing protein compare
ABIE40_RS18775 -5.9 -11.9 pyruvate carboxylase compare
ABIE40_RS19050 -5.7 -10.7 3-isopropylmalate dehydrogenase compare
ABIE40_RS06555 -5.7 -3.1 phosphoribosylglycinamide formyltransferase compare
ABIE40_RS00595 -5.6 -3.9 glucokinase compare
ABIE40_RS09545 -5.6 -3.4 anthranilate phosphoribosyltransferase compare
ABIE40_RS06730 -5.5 -3.8 riboflavin synthase compare
ABIE40_RS17530 -5.4 -3.7 diaminopimelate decarboxylase compare
ABIE40_RS09660 -5.4 -13.9 AI-2E family transporter compare
ABIE40_RS16320 -5.3 -3.7 histidinol-phosphatase compare
ABIE40_RS03665 -5.3 -3.7 ATP phosphoribosyltransferase compare
ABIE40_RS02725 -5.2 -3.6 histidinol dehydrogenase compare
ABIE40_RS10725 -5.2 -3.6 adenosylcobinamide-GDP ribazoletransferase compare
ABIE40_RS01970 -5.2 -3.6 acetylglutamate kinase compare
ABIE40_RS09095 -5.2 -5.0 PAS domain-containing sensor histidine kinase compare
ABIE40_RS02325 -5.2 -3.6 ornithine carbamoyltransferase compare
ABIE40_RS03660 -5.2 -3.6 ATP phosphoribosyltransferase regulatory subunit compare
ABIE40_RS19435 -5.1 -2.7 phosphoribosyl-ATP diphosphatase compare
ABIE40_RS20460 -5.1 -3.5 precorrin-3B synthase compare
ABIE40_RS08635 -5.0 -10.2 class I poly(R)-hydroxyalkanoic acid synthase compare
ABIE40_RS10720 -5.0 -3.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
ABIE40_RS19460 -4.9 -3.4 imidazoleglycerol-phosphate dehydratase HisB compare
ABIE40_RS11175 -4.9 -3.4 cobyric acid synthase compare
ABIE40_RS09725 -4.9 -3.3 phosphoribosyl-AMP cyclohydrolase compare
ABIE40_RS10180 -4.8 -3.3 phosphoribosylformylglycinamidine synthase subunit PurL compare
ABIE40_RS06930 -4.8 -3.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
ABIE40_RS19440 -4.7 -3.3 imidazole glycerol phosphate synthase subunit HisF compare
ABIE40_RS19330 -4.7 -3.3 phosphoribosylanthranilate isomerase compare
ABIE40_RS13410 -4.7 -3.2 anthranilate synthase compare
ABIE40_RS11165 -4.7 -2.9 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
ABIE40_RS17650 -4.6 -3.2 cobaltochelatase subunit CobS compare
ABIE40_RS11105 -4.5 -6.2 cobyrinate a,c-diamide synthase compare
ABIE40_RS20440 -4.5 -3.1 cobalt-precorrin-6A reductase compare
ABIE40_RS06560 -4.5 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
ABIE40_RS02320 -4.5 -3.1 aspartate aminotransferase family protein compare
ABIE40_RS09360 -4.5 -4.4 excinuclease ABC subunit UvrA compare
ABIE40_RS16655 -4.5 -7.3 creatininase family protein compare
ABIE40_RS11150 -4.5 -9.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
ABIE40_RS11095 -4.4 -3.1 adenosylcobinamide-phosphate synthase CbiB compare
ABIE40_RS20435 -4.4 -3.1 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE compare
ABIE40_RS01930 -4.4 -2.3 succinyl-diaminopimelate desuccinylase compare
ABIE40_RS06270 -4.4 -6.7 amidophosphoribosyltransferase compare
ABIE40_RS11495 -4.4 -4.3 acetolactate synthase 3 large subunit compare
ABIE40_RS09150 -4.4 -18.0 nitrite/sulfite reductase compare
ABIE40_RS19450 -4.4 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
ABIE40_RS17595 -4.4 -3.0 histidinol-phosphate transaminase compare
ABIE40_RS14980 -4.4 -3.0 glycoside hydrolase family 16 protein compare
ABIE40_RS22300 -4.2 -5.8 superoxide dismutase compare
ABIE40_RS12925 -4.2 -13.2 pyridoxal phosphate-dependent aminotransferase compare
ABIE40_RS19130 -4.2 -2.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
ABIE40_RS18925 -4.2 -6.7 glutamate-5-semialdehyde dehydrogenase compare
ABIE40_RS11155 -4.2 -5.7 cobaltochelatase subunit CobN compare
ABIE40_RS20455 -4.1 -2.2 precorrin-8X methylmutase compare
ABIE40_RS20430 -4.1 -2.8 precorrin-4 C(11)-methyltransferase compare
ABIE40_RS16070 -4.0 -3.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
ABIE40_RS15855 -4.0 -3.1 cell division protein ZapA compare
ABIE40_RS08005 -4.0 -2.7 dihydroxy-acid dehydratase compare
ABIE40_RS03405 -4.0 -2.7 anti-sigma factor compare
ABIE40_RS08645 -4.0 -6.5 LL-diaminopimelate aminotransferase compare
ABIE40_RS12135 -4.0 -2.7 methionine synthase compare
ABIE40_RS20465 -4.0 -2.7 precorrin-6A synthase (deacetylating) compare
ABIE40_RS19445 -3.9 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
ABIE40_RS15345 -3.9 -10.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS09090 -3.9 -8.9 nitrogen regulation protein NR(I) compare
ABIE40_RS06720 -3.8 -2.5 transcriptional regulator NrdR compare
ABIE40_RS03190 -3.8 -5.1 phosphogluconate dehydratase compare
ABIE40_RS20450 -3.7 -4.0 precorrin-2 C(20)-methyltransferase compare
ABIE40_RS19480 -3.7 -2.6 DUF1402 family protein compare
ABIE40_RS08425 -3.7 -3.5 iron-sulfur cluster insertion protein ErpA compare
ABIE40_RS05430 -3.6 -2.5 phosphoribosylamine--glycine ligase compare
ABIE40_RS19355 -3.5 -2.7 thioredoxin compare
ABIE40_RS10155 -3.5 -2.1 phosphoribosylformylglycinamidine synthase subunit PurQ compare
ABIE40_RS17590 -3.5 -2.4 prephenate/arogenate dehydrogenase family protein compare
ABIE40_RS14990 -3.3 -10.3 glycosyltransferase family 2 protein compare
ABIE40_RS14955 -3.3 -11.5 sugar transferase compare
ABIE40_RS17645 -3.3 -4.4 cobaltochelatase subunit CobT compare
ABIE40_RS09140 -3.3 -9.1 siroheme synthase CysG compare
ABIE40_RS11060 -3.3 -6.0 lipid A biosynthesis lauroyl acyltransferase compare
ABIE40_RS06725 -3.3 -5.7 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD compare
ABIE40_RS10200 -3.2 -2.2 Grx4 family monothiol glutaredoxin compare
ABIE40_RS19365 -3.2 -3.1 double-strand break repair protein AddB compare
ABIE40_RS20445 -3.2 -1.4 precorrin-3B C(17)-methyltransferase compare
ABIE40_RS00930 -3.1 -8.0 ABC transporter permease compare
ABIE40_RS01765 -3.1 -6.2 [protein-PII] uridylyltransferase compare
ABIE40_RS30895 -3.1 -3.9 cytochrome o ubiquinol oxidase subunit IV compare
ABIE40_RS15940 -3.0 -3.2 YegP family protein compare
ABIE40_RS06050 -3.0 -6.9 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
ABIE40_RS18720 -2.8 -2.3 polyprenyl synthetase family protein compare
ABIE40_RS00935 -2.7 -6.5 ABC transporter substrate-binding protein compare
ABIE40_RS07320 -2.7 -1.4 DUF3572 domain-containing protein compare
ABIE40_RS26670 -2.7 -1.2 hypothetical protein compare
ABIE40_RS00580 -2.7 -2.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
ABIE40_RS18880 -2.6 -13.0 UDP-glucose 4-epimerase GalE compare
ABIE40_RS10345 -2.5 -5.0 RNA polymerase-binding protein DksA compare
ABIE40_RS12360 -2.5 -10.1 DUF5131 family protein compare
ABIE40_RS29160 -2.5 -2.4 hypothetical protein compare
ABIE40_RS11960 -2.5 -1.7 energy-dependent translational throttle protein EttA compare
ABIE40_RS00725 -2.5 -5.1 DNA cytosine methyltransferase compare
ABIE40_RS04470 -2.4 -12.4 sulfate adenylyltransferase subunit CysD compare
ABIE40_RS14985 -2.3 -2.1 glycosyltransferase compare
ABIE40_RS04465 -2.3 -10.1 sulfate adenylyltransferase subunit CysN compare
ABIE40_RS19455 -2.3 -1.6 DUF2628 domain-containing protein compare
ABIE40_RS17565 -2.3 -2.0 ABC transporter permease compare
ABIE40_RS18685 -2.2 -4.3 beta-ketoacyl-ACP reductase compare
ABIE40_RS05665 -2.2 -3.8 HAMP domain-containing sensor histidine kinase compare
ABIE40_RS04115 -2.2 -1.8 ribonuclease HI compare
ABIE40_RS05660 -2.2 -2.8 response regulator transcription factor compare
ABIE40_RS05670 -2.1 -4.9 membrane protein compare
ABIE40_RS15690 -2.1 -1.1 DoxX family protein compare
ABIE40_RS09540 -2.1 -5.2 peptidylprolyl isomerase compare
ABIE40_RS05155 -2.0 -4.5 DUF5330 domain-containing protein compare
ABIE40_RS13370 -2.0 -9.0 CDF family cation efflux transporter EmfA compare
ABIE40_RS19245 -2.0 -4.1 Maf-like protein compare
ABIE40_RS04215 -2.0 -2.7 sensor domain-containing phosphodiesterase compare
ABIE40_RS03515 -2.0 -3.2 glutamate--cysteine ligase compare
ABIE40_RS09720 -2.0 -3.5 GTP cyclohydrolase I FolE compare
ABIE40_RS04475 -2.0 -8.1 phosphoadenylyl-sulfate reductase compare
ABIE40_RS16490 -1.9 -7.3 glycogen synthase GlgA compare
ABIE40_RS00490 -1.9 -10.0 DNA polymerase I compare
ABIE40_RS16210 -1.9 -7.1 homospermidine synthase compare
ABIE40_RS10140 -1.8 -2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
ABIE40_RS30865 -1.8 -1.8 CheR family methyltransferase compare
ABIE40_RS09145 -1.8 -4.0 DUF2849 domain-containing protein compare
ABIE40_RS19700 -1.8 -3.1 MBL fold metallo-hydrolase compare
ABIE40_RS12845 -1.8 -3.3 glycosyltransferase family 4 protein compare
ABIE40_RS18640 -1.8 -7.0 M48 family metalloprotease compare
ABIE40_RS08140 -1.8 -9.9 vitamin B12-dependent ribonucleotide reductase compare
ABIE40_RS03815 -1.8 -1.7 DUF6101 family protein compare
ABIE40_RS03170 -1.7 -9.1 carbohydrate ABC transporter permease compare
ABIE40_RS08500 -1.7 -2.2 preprotein translocase subunit YajC compare
ABIE40_RS08970 -1.7 -6.8 citrate synthase compare
ABIE40_RS10850 -1.7 -4.7 excinuclease ABC subunit UvrB compare
ABIE40_RS23000 -1.6 -2.8 TetR/AcrR family transcriptional regulator compare
ABIE40_RS01055 -1.6 -4.0 translation elongation factor 4 compare
ABIE40_RS16660 -1.6 -3.2 GTP-binding protein compare
ABIE40_RS08865 -1.6 -6.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABIE40_RS28900 -1.6 -3.4 HD domain-containing protein compare
ABIE40_RS27935 -1.6 -2.1 hypothetical protein compare
ABIE40_RS19645 -1.5 -7.2 acyltransferase compare
ABIE40_RS10425 -1.5 -4.7 ABC transporter ATP-binding protein compare
ABIE40_RS22755 -1.5 -1.3 exopolysaccharide biosynthesis protein compare
ABIE40_RS27110 -1.5 -2.4 helix-turn-helix transcriptional regulator compare
ABIE40_RS03160 -1.5 -10.0 ABC transporter substrate-binding protein compare
ABIE40_RS20035 -1.5 -5.5 ABC transporter ATP-binding protein compare
ABIE40_RS19395 -1.5 -2.0 PTS sugar transporter subunit IIA compare
ABIE40_RS00340 -1.5 -2.5 30S ribosome-binding factor RbfA compare
ABIE40_RS15455 -1.4 -1.2 histidine phosphatase family protein compare
ABIE40_RS09425 -1.4 -4.2 peptidylprolyl isomerase compare
ABIE40_RS03180 -1.4 -8.8 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
ABIE40_RS05025 -1.4 -2.8 MucR family transcriptional regulator compare
ABIE40_RS18615 -1.4 -1.6 MarR family transcriptional regulator compare
ABIE40_RS17290 -1.4 -4.5 peptide chain release factor N(5)-glutamine methyltransferase compare
ABIE40_RS12860 -1.4 -0.9 Lrp/AsnC family transcriptional regulator compare
ABIE40_RS18055 -1.4 -3.2 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
ABIE40_RS00200 -1.4 -2.5 DNA replication/repair protein RecF compare
ABIE40_RS19360 -1.4 -3.5 double-strand break repair helicase AddA compare
ABIE40_RS19385 -1.4 -3.9 adenosylhomocysteinase compare
ABIE40_RS27255 -1.4 -1.4 hypothetical protein compare
ABIE40_RS29850 -1.4 -1.3 IS110 family transposase compare
ABIE40_RS28420 -1.4 -1.2 30S ribosomal protein S21 compare
ABIE40_RS00925 -1.4 -2.9 ABC transporter permease compare
ABIE40_RS11085 -1.3 -2.3 acyl carrier protein compare
ABIE40_RS14855 -1.3 -4.5 NAD-dependent epimerase compare
ABIE40_RS08980 -1.3 -3.1 transcriptional repressor LexA compare
ABIE40_RS03165 -1.3 -5.2 sugar ABC transporter permease compare
ABIE40_RS28485 -1.3 -0.7 hypothetical protein compare
ABIE40_RS02580 -1.3 -8.5 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
ABIE40_RS10415 -1.3 -4.5 ABC-type transport auxiliary lipoprotein family protein compare
ABIE40_RS28815 -1.3 -4.1 GNAT family N-acetyltransferase compare
ABIE40_RS11490 -1.2 -4.3 acetolactate synthase small subunit compare
ABIE40_RS15730 -1.2 -2.5 crossover junction endodeoxyribonuclease RuvC compare
ABIE40_RS10590 -1.2 -1.4 hypothetical protein compare
ABIE40_RS09170 -1.2 -2.7 cytochrome c biogenesis CcdA family protein compare
ABIE40_RS15920 -1.2 -0.6 50S ribosomal protein L31 compare
ABIE40_RS05685 -1.2 -6.9 heme lyase CcmF/NrfE family subunit compare
ABIE40_RS00450 -1.2 -3.5 molecular chaperone DnaJ compare
ABIE40_RS11065 -1.2 -1.6 zinc-binding dehydrogenase compare
ABIE40_RS30225 -1.2 -2.1 hypothetical protein compare
ABIE40_RS20040 -1.2 -5.6 carbohydrate ABC transporter permease compare
ABIE40_RS15745 -1.2 -3.3 Holliday junction branch migration protein RuvA compare
ABIE40_RS06700 -1.2 -1.8 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE40_RS06220 -1.2 -7.0 citramalate synthase compare
ABIE40_RS28390 -1.2 -2.2 thiamine pyrophosphate-dependent enzyme compare
ABIE40_RS14785 -1.1 -4.6 hypothetical protein compare
ABIE40_RS21985 -1.1 -2.2 MarR family transcriptional regulator compare
ABIE40_RS24730 -1.1 -4.3 glycerol-3-phosphate dehydrogenase compare
ABIE40_RS01705 -1.1 -5.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
ABIE40_RS08935 -1.1 -2.0 RIP metalloprotease RseP compare
ABIE40_RS14940 -1.1 -6.5 acyltransferase compare
ABIE40_RS06775 -1.1 -1.5 DUF177 domain-containing protein compare
ABIE40_RS18690 -1.1 -4.0 acetyl-CoA C-acetyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Ethanol in Rhizobium sp. OAE497

For carbon source Ethanol across organisms