Experiment set1IT044 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

marine broth with Sodium perchlorate monohydrate 75 mM

200 most detrimental genes:

  gene name fitness t score description  
Echvi_0986 +2.2 11.6 Rrf2 family protein compare
Echvi_0222 +1.7 7.5 hypothetical protein compare
Echvi_1292 +1.4 10.5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_1516 +1.4 3.4 hypothetical protein compare
Echvi_1743 +1.2 5.4 alpha-L-glutamate ligases, RimK family compare
Echvi_3193 +1.2 2.2 hypothetical protein compare
Echvi_1758 +1.1 5.1 Gas vesicle protein compare
Echvi_2274 +1.1 9.2 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Echvi_0090 +1.1 3.4 Iron-sulfur cluster assembly accessory protein compare
Echvi_0091 +1.1 4.0 glycine cleavage system T protein compare
Echvi_2958 +1.1 7.5 amino acid/peptide transporter (Peptide:H+ symporter), bacterial compare
Echvi_4080 +1.1 1.8 hypothetical protein compare
Echvi_2385 +1.0 2.8 hypothetical protein compare
Echvi_0745 +1.0 8.5 Predicted aminopeptidases compare
Echvi_0711 +1.0 3.7 hypothetical protein compare
Echvi_0744 +0.9 5.9 glycine dehydrogenase (decarboxylating) compare
Echvi_0298 +0.9 8.0 gliding-associated putative ABC transporter substrate-binding component GldG compare
Echvi_0622 +0.9 5.6 gliding motility-associated protein GldL compare
Echvi_0299 +0.9 7.8 gliding motility-associated ABC transporter permease protein GldF compare
Echvi_3456 +0.9 2.0 Uncharacterized protein conserved in bacteria compare
Echvi_1140 +0.9 6.3 Response regulator of the LytR/AlgR family compare
Echvi_1761 +0.9 5.5 hypothetical protein compare
Echvi_1460 +0.9 2.3 Thymidine kinase compare
Echvi_4579 +0.9 2.5 hypothetical protein compare
Echvi_0955 +0.9 8.2 TonB-linked outer membrane protein, SusC/RagA family compare
Echvi_1139 +0.8 6.7 Putative regulator of cell autolysis compare
Echvi_1456 +0.8 4.9 chromate transporter, chromate ion transporter (CHR) family compare
Echvi_0300 +0.8 5.8 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
Echvi_0620 +0.8 6.9 gliding motility associated protien GldN compare
Echvi_1078 +0.8 2.4 Protein-L-isoaspartate carboxylmethyltransferase compare
Echvi_2298 +0.8 1.4 hypothetical protein compare
Echvi_1293 +0.8 5.0 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_0621 +0.8 7.3 gliding motility-associated protein GldM compare
Echvi_0757 +0.8 1.8 hypothetical protein compare
Echvi_1224 +0.8 6.2 gliding motility-associated lipoprotein GldD compare
Echvi_3047 +0.8 6.5 Leucine Rich Repeat. compare
Echvi_2314 +0.8 3.7 beta-ketoacyl-acyl-carrier-protein synthase II compare
Echvi_0851 +0.7 3.0 Uncharacterized conserved protein compare
Echvi_2937 +0.7 2.0 Uncharacterized conserved protein compare
Echvi_0623 +0.7 6.7 gliding motility-associated lipoprotein GldK compare
Echvi_3995 +0.7 1.5 hypothetical protein compare
Echvi_1813 +0.7 0.9 Ribonuclease HI compare
Echvi_2194 +0.7 2.5 ADP-ribose pyrophosphatase compare
Echvi_0954 +0.7 6.1 SusD family. compare
Echvi_1510 +0.7 1.4 bacillithiol biosynthesis cysteine-adding enzyme BshC compare
Echvi_1610 +0.7 6.3 Zinc carboxypeptidase. compare
Echvi_1457 +0.7 4.1 Isopenicillin N synthase and related dioxygenases compare
Echvi_1525 +0.7 4.8 hypothetical protein compare
Echvi_3291 +0.7 3.3 Predicted membrane protein compare
Echvi_1311 +0.7 5.9 gliding motility-associated lipoprotein GldJ compare
Echvi_1319 +0.7 6.2 gliding motility-associated lipoprotein GldB compare
Echvi_2205 +0.7 6.0 hypothetical protein compare
Echvi_3999 +0.7 1.8 hypothetical protein compare
Echvi_0318 +0.7 2.8 mraZ protein compare
Echvi_0985 +0.7 4.5 Predicted membrane protein compare
Echvi_0012 +0.7 4.3 ABC-type antimicrobial peptide transport system, ATPase component compare
Echvi_1760 +0.6 2.8 preprotein translocase, YajC subunit compare
Echvi_0589 +0.6 2.6 hypothetical protein compare
Echvi_2266 +0.6 5.3 Alanine dehydrogenase compare
Echvi_1789 +0.6 3.0 Protein of unknown function (DUF2480). compare
Echvi_3638 +0.6 4.1 5-methyltetrahydrofolate--homocysteine methyltransferase compare
Echvi_1765 +0.6 1.2 Cell wall-associated hydrolases (invasion-associated proteins) compare
Echvi_2249 +0.6 0.8 hypothetical protein compare
Echvi_3703 +0.6 1.7 hypothetical protein compare
Echvi_1297 +0.6 2.0 hypothetical protein compare
Echvi_0011 +0.6 4.7 ABC-type transport system, involved in lipoprotein release, permease component compare
Echvi_3637 +0.6 2.3 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Echvi_2198 +0.6 1.7 hypothetical protein compare
Echvi_4640 +0.6 1.2 hypothetical protein compare
Echvi_0010 +0.6 3.7 hypothetical protein compare
Echvi_0370 +0.6 1.7 WbqC-like protein family. compare
Echvi_0007 +0.6 2.6 Cytochrome c, mono- and diheme variants compare
Echvi_0862 +0.6 4.2 Glutamate dehydrogenase/leucine dehydrogenase compare
Echvi_0169 +0.6 5.1 hypothetical protein compare
Echvi_2775 +0.6 4.1 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_0624 +0.6 4.8 Bacteroidetes-specific putative membrane protein compare
Echvi_3244 +0.6 1.7 hypothetical protein compare
Echvi_1020 +0.6 1.3 hypothetical protein compare
Echvi_0330 +0.6 2.4 hypothetical protein compare
Echvi_4666 +0.6 1.7 Cold shock proteins compare
Echvi_1745 +0.6 2.8 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Echvi_0048 +0.6 2.1 Pseudouridylate synthases, 23S RNA-specific compare
Echvi_4094 +0.6 1.7 hypothetical protein compare
Echvi_3283 +0.6 1.7 Lactoylglutathione lyase and related lyases compare
Echvi_3470 +0.6 3.7 DNA-3-methyladenine glycosylase (3mg) compare
Echvi_0333 +0.6 4.8 Bacteroidetes-specific putative membrane protein compare
Echvi_1821 +0.5 4.3 hypothetical protein compare
Echvi_0260 +0.5 1.6 Protein of unknown function (DUF3467). compare
Echvi_0135 +0.5 2.5 Uncharacterized protein conserved in bacteria compare
Echvi_2029 +0.5 2.0 hypothetical protein compare
Echvi_1492 +0.5 2.0 hypothetical protein compare
Echvi_2824 +0.5 4.4 hypothetical protein compare
Echvi_4551 +0.5 1.6 hypothetical protein compare
Echvi_0334 +0.5 5.0 hypothetical protein compare
Echvi_3376 +0.5 2.0 O-6-methylguanine DNA methyltransferase compare
Echvi_2761 +0.5 1.5 hypothetical protein compare
Echvi_1533 +0.5 1.9 hypothetical protein compare
Echvi_0827 +0.5 1.5 Site-specific recombinase XerD compare
Echvi_3027 +0.5 2.3 Uncharacterized protein conserved in bacteria compare
Echvi_4342 +0.5 4.5 transporter, SSS family compare
Echvi_1592 +0.5 2.1 Cytosine/adenosine deaminases compare
Echvi_2860 +0.5 1.6 sugar-phosphate isomerases, RpiB/LacA/LacB family compare
Echvi_2503 +0.5 1.2 hypothetical protein compare
Echvi_0920 +0.5 1.2 hypothetical protein compare
Echvi_4048 +0.5 1.1 hypothetical protein compare
Echvi_3853 +0.5 0.9 Predicted transcriptional regulators compare
Echvi_3046 +0.5 2.1 hypothetical protein compare
Echvi_0875 +0.5 2.3 hypothetical protein compare
Echvi_1764 +0.5 1.7 hypothetical protein compare
Echvi_4083 +0.5 4.8 hypothetical protein compare
Echvi_3358 +0.5 0.9 hypothetical protein compare
Echvi_0674 +0.5 4.2 hypothetical protein compare
Echvi_2252 +0.5 1.9 Mg-chelatase subunit ChlD compare
Echvi_1080 +0.5 1.2 hypothetical protein compare
Echvi_1586 +0.5 2.2 hypothetical protein compare
Echvi_0716 +0.5 2.6 Asparaginase compare
Echvi_0186 +0.5 1.2 Predicted metal-binding, possibly nucleic acid-binding protein compare
Echvi_0861 +0.5 2.0 hypothetical protein compare
Echvi_0733 +0.5 4.3 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_0691 +0.5 4.3 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_4209 +0.5 2.4 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_3934 +0.5 0.5 hypothetical protein compare
Echvi_0945 +0.5 1.2 hypothetical protein compare
Echvi_4188 +0.5 2.2 hypothetical protein compare
Echvi_3020 +0.5 2.0 hypothetical protein compare
Echvi_1103 +0.5 4.0 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases compare
Echvi_4075 +0.5 3.0 hypothetical protein compare
Echvi_4265 +0.5 0.6 hypothetical protein compare
Echvi_2917 +0.5 2.5 hypothetical protein compare
Echvi_3740 +0.5 3.7 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family compare
Echvi_0617 +0.5 4.2 hypothetical protein compare
Echvi_2829 +0.4 4.2 hypothetical protein compare
Echvi_1742 +0.4 0.6 Uncharacterized protein conserved in archaea compare
Echvi_0857 +0.4 3.2 hypothetical protein compare
Echvi_0192 +0.4 2.3 hypothetical protein compare
Echvi_1888 +0.4 3.8 hypothetical protein compare
Echvi_1523 +0.4 2.9 Predicted permeases compare
Echvi_0644 +0.4 2.3 hypothetical protein compare
Echvi_3951 +0.4 3.0 Proline racemase compare
Echvi_3045 +0.4 2.2 hypothetical protein compare
Echvi_3044 +0.4 1.9 hypothetical protein compare
Echvi_3742 +0.4 3.1 Outer membrane protein compare
Echvi_4465 +0.4 2.4 hypothetical protein compare
Echvi_3745 +0.4 1.7 hypothetical protein compare
Echvi_0395 +0.4 1.1 DNA repair proteins compare
Echvi_2912 +0.4 2.9 Kef-type K+ transport systems, membrane components compare
Echvi_0910 +0.4 1.8 hypothetical protein compare
Echvi_1108 +0.4 3.3 hypothetical protein compare
Echvi_1991 +0.4 1.2 Predicted methylated DNA-protein cysteine methyltransferase compare
Echvi_0096 +0.4 0.7 Predicted pyrophosphatase compare
Echvi_2376 +0.4 1.9 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Echvi_1211 +0.4 2.9 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain compare
Echvi_4414 +0.4 0.5 hypothetical protein compare
Echvi_4052 +0.4 2.2 Uncharacterized conserved protein compare
Echvi_1247 +0.4 0.8 single stranded DNA-binding protein (ssb) compare
Echvi_3379 +0.4 3.4 hypothetical protein compare
Echvi_0199 +0.4 3.0 hypothetical protein compare
Echvi_3741 +0.4 2.8 RND family efflux transporter, MFP subunit compare
Echvi_4260 +0.4 2.2 hypothetical protein compare
Echvi_2457 +0.4 2.1 histidinol-phosphatase compare
Echvi_1930 +0.4 1.0 DNA repair proteins compare
Echvi_0173 +0.4 1.9 hypothetical protein compare
Echvi_2377 +0.4 1.0 hypothetical protein compare
Echvi_1557 +0.4 1.8 MoxR-like ATPases compare
Echvi_0860 +0.4 2.4 hypothetical protein compare
Echvi_1608 +0.4 2.5 hypothetical protein compare
Echvi_4300 +0.4 2.1 RNA polymerase sigma factor, sigma-70 family compare
Echvi_4033 +0.4 1.2 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
Echvi_3813 +0.4 1.0 Uncharacterized protein conserved in bacteria compare
Echvi_4589 +0.4 1.5 MoxR-like ATPases compare
Echvi_3576 +0.4 3.4 Subtilisin-like serine proteases compare
Echvi_2631 +0.4 1.5 hypothetical protein compare
Echvi_3712 +0.4 1.1 hypothetical protein compare
Echvi_2793 +0.4 3.6 hypothetical protein compare
Echvi_3674 +0.4 1.7 Putative transposase. compare
Echvi_3201 +0.4 2.2 RteC protein. compare
Echvi_0449 +0.4 1.8 hypothetical protein compare
Echvi_4095 +0.4 2.0 Bacteroides conjugative transposon TraK protein compare
Echvi_3639 +0.4 1.1 Methionine synthase I (cobalamin-dependent), methyltransferase domain compare
Echvi_1036 +0.4 1.9 hypothetical protein compare
Echvi_3559 +0.4 2.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Echvi_0671 +0.4 2.2 hypothetical protein compare
Echvi_2525 +0.4 2.0 GTP-binding protein YchF compare
Echvi_3896 +0.4 0.6 PAP2 superfamily. compare
Echvi_1759 +0.4 1.4 Protein of unknown function (DUF1573). compare
Echvi_4527 +0.4 1.2 Plasmid stabilization system protein compare
Echvi_4015 +0.4 2.2 Predicted dehydrogenases and related proteins compare
Echvi_2232 +0.4 1.4 Uncharacterized small membrane protein compare
Echvi_1939 +0.4 1.6 Bacteroides conjugative transposon TraN protein compare
Echvi_0727 +0.4 0.4 hypothetical protein compare
Echvi_0208 +0.4 1.9 hypothetical protein compare
Echvi_2334 +0.4 0.8 Uncharacterized conserved protein compare
Echvi_2950 +0.4 2.1 hypothetical protein compare
Echvi_4232 +0.4 1.2 Glycosyltransferase compare
Echvi_2330 +0.4 1.2 hypothetical protein compare
Echvi_2625 +0.4 1.5 hypothetical protein compare
Echvi_1332 +0.4 1.1 single-stranded-DNA-specific exonuclease RecJ compare
Echvi_1236 +0.4 1.0 hypothetical protein compare
Echvi_3365 +0.4 1.7 Transcriptional regulator compare
Echvi_4079 +0.4 2.3 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium perchlorate monohydrate in Echinicola vietnamensis KMM 6221, DSM 17526

For stress Sodium perchlorate monohydrate across organisms