Experiment set1IT040 for Pontibacter actiniarum KMM 6156, DSM 19842

Compare to:

marine broth with Sodium perchlorate monohydrate 50 mM

200 most detrimental genes:

  gene name fitness t score description  
CA264_06355 +2.9 25.1 ergothioneine biosynthesis protein EgtB compare
CA264_02025 +2.5 10.2 nitroreductase compare
CA264_02370 +2.3 18.2 O-acetylhomoserine aminocarboxypropyltransferase compare
CA264_10920 +2.2 16.1 helix-turn-helix-type transcriptional regulator compare
CA264_07245 +2.1 16.9 hypothetical protein compare
CA264_18135 +1.6 9.6 ABC transporter ATP-binding protein compare
CA264_01390 +1.5 10.3 iron ABC transporter permease compare
CA264_19150 +1.4 11.5 TonB dependent receptor compare
CA264_01385 +1.3 9.9 iron ABC transporter substrate-binding protein compare
CA264_19215 +1.3 6.3 RNA polymerase subunit sigma compare
CA264_12150 +1.3 4.4 hypothetical protein compare
CA264_12440 +1.2 2.2 methionyl-tRNA formyltransferase compare
CA264_02685 +1.2 7.1 hypothetical protein compare
CA264_14560 +1.1 1.6 VanZ family protein compare
CA264_15165 +1.0 4.9 flagellar motor protein MotA compare
CA264_08080 +1.0 4.4 gliding motility-associated ABC transporter ATP-binding subunit GldA compare
CA264_19925 +1.0 5.9 peptidyl-prolyl cis-trans isomerase compare
CA264_01065 +0.9 4.4 MarR family transcriptional regulator compare
CA264_15010 +0.9 5.6 gliding motility lipoprotein GldD compare
CA264_16365 +0.9 2.2 gliding motility protein GldL compare
CA264_19005 +0.9 7.3 SusC/RagA family TonB-linked outer membrane protein compare
CA264_08070 +0.9 4.7 gliding motility-associated ABC transporter substrate-binding protein GldG compare
CA264_06610 +0.8 2.7 iron-dependent repressor compare
CA264_06330 +0.8 1.5 cation:proton antiporter compare
CA264_20635 +0.8 1.4 thioredoxin family protein compare
CA264_20010 +0.8 4.4 gliding motility lipoprotein GldH compare
CA264_16360 +0.8 4.4 gliding motility protein GldM compare
CA264_17235 +0.8 4.4 gliding motility lipoprotein GldJ compare
CA264_12160 +0.7 2.4 transcriptional regulator compare
CA264_20980 +0.7 2.6 conjugal transfer protein compare
CA264_00295 +0.7 2.9 hypothetical protein compare
CA264_18030 +0.7 4.3 cation transporter compare
CA264_02080 +0.7 1.0 hypothetical protein compare
CA264_19030 +0.7 2.5 ribosomal subunit interface protein compare
CA264_19815 +0.6 2.6 hypothetical protein compare
CA264_02450 +0.6 2.6 hypothetical protein compare
CA264_21460 +0.6 1.1 hypothetical protein compare
CA264_12155 +0.6 1.7 histidine phosphatase family protein compare
CA264_12435 +0.6 3.5 GlcNAc-PI de-N-acetylase compare
CA264_15170 +0.6 3.3 biopolymer transporter ExbD compare
CA264_02465 +0.6 2.8 hypothetical protein compare
CA264_16720 +0.6 2.3 hypothetical protein compare
CA264_20520 +0.6 3.3 hypothetical protein compare
CA264_17565 +0.6 1.4 hypothetical protein compare
CA264_16370 +0.6 3.8 gliding motility lipoprotein GldK compare
CA264_20110 +0.6 2.3 DNA helicase RecQ compare
CA264_13405 +0.6 3.5 NAD-dependent dehydratase compare
CA264_02500 +0.6 1.8 hypothetical protein compare
CA264_06070 +0.6 0.7 kinase compare
CA264_06035 +0.6 1.8 hypothetical protein compare
CA264_08870 +0.5 2.7 imidazolonepropionase compare
CA264_08005 +0.5 1.0 phosphonate ABC transporter ATP-binding protein compare
CA264_20120 +0.5 1.6 hypothetical protein compare
CA264_15340 +0.5 2.2 hypothetical protein compare
CA264_01865 +0.5 1.3 polyisoprenoid-binding protein compare
CA264_02365 +0.5 2.8 exodeoxyribonuclease VII large subunit compare
CA264_13340 +0.5 1.2 iron-sulfur cluster assembly accessory protein compare
CA264_12165 +0.5 3.1 hypothetical protein compare
CA264_09355 +0.5 2.5 nitroreductase compare
CA264_00660 +0.5 3.3 hypothetical protein compare
CA264_08075 +0.5 1.5 gliding motility-associated ABC transporter permease subunit GldF compare
CA264_09985 +0.5 1.1 hypothetical protein compare
CA264_08780 +0.5 3.7 hypothetical protein compare
CA264_14350 +0.5 3.0 hemolysin compare
CA264_13480 +0.5 2.2 hypothetical protein compare
CA264_17955 +0.5 1.6 hypothetical protein compare
CA264_10520 +0.5 1.3 molybdopterin synthase sulfur carrier subunit compare
CA264_20940 +0.5 2.8 pyridine nucleotide-disulfide oxidoreductase compare
CA264_02030 +0.5 1.6 hypothetical protein compare
CA264_13420 +0.5 1.4 hypothetical protein compare
CA264_18880 +0.5 2.3 hypothetical protein compare
CA264_07015 +0.5 2.6 hypothetical protein compare
CA264_01605 +0.5 3.5 arginase compare
CA264_08250 +0.5 2.4 hypothetical protein compare
CA264_09330 +0.5 1.7 cold-shock protein compare
CA264_08230 +0.5 2.4 TetR family transcriptional regulator compare
CA264_18245 +0.5 1.1 NADH-quinone oxidoreductase subunit A compare
CA264_02690 +0.5 2.6 rhodanese compare
CA264_00040 +0.5 3.7 hypothetical protein compare
CA264_09395 +0.5 1.9 hypothetical protein compare
CA264_08105 +0.5 2.0 NupC/NupG family nucleoside CNT transporter compare
CA264_19010 +0.5 4.1 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
CA264_10305 +0.5 0.4 hypothetical protein compare
CA264_10975 +0.5 2.7 Pathogenesis-related transcriptional factor and ERF protein compare
CA264_19220 +0.5 1.3 hypothetical protein compare
CA264_16355 +0.4 1.5 gliding motility protein GldN compare
CA264_11915 +0.4 0.8 peptidoglycan synthetase compare
CA264_09060 +0.4 2.0 response regulator compare
CA264_19200 +0.4 2.5 glycosyl transferase compare
CA264_18275 +0.4 1.7 hypothetical protein compare
CA264_13720 +0.4 1.9 hypothetical protein compare
CA264_18775 +0.4 0.6 hypothetical protein compare
CA264_17925 +0.4 3.1 chromate transporter compare
CA264_02595 +0.4 1.8 oxidoreductase compare
CA264_16770 +0.4 2.0 hypothetical protein compare
CA264_00150 +0.4 2.7 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
CA264_02675 +0.4 2.6 succinate-semialdehyde dehydrogenase compare
CA264_11385 +0.4 1.6 hypothetical protein compare
CA264_14805 +0.4 1.1 DNA-binding protein compare
CA264_17100 +0.4 1.2 hypothetical protein compare
CA264_14505 +0.4 2.9 hypothetical protein compare
CA264_20700 +0.4 2.4 hypothetical protein compare
CA264_13015 +0.4 3.0 sensor histidine kinase compare
CA264_02600 +0.4 1.8 DsbA family protein compare
CA264_03590 +0.4 1.0 hypothetical protein compare
CA264_10045 +0.4 1.7 hypothetical protein compare
CA264_10715 +0.4 1.5 hypothetical protein compare
CA264_16150 +0.4 0.7 acyl carrier protein compare
CA264_12325 +0.4 2.9 polysaccharide biosynthesis protein compare
CA264_16860 +0.4 1.9 hypothetical protein compare
CA264_18215 +0.4 1.2 hypothetical protein compare
CA264_07605 +0.4 1.5 response regulator compare
CA264_12450 +0.4 2.3 N-acetylneuraminate synthase compare
CA264_11585 +0.4 2.1 response regulator compare
CA264_19765 +0.4 1.6 hypothetical protein compare
CA264_12350 +0.4 2.7 glycosyltransferase family 1 protein compare
CA264_19450 +0.4 1.6 type I methionyl aminopeptidase compare
CA264_13825 +0.4 0.9 hypothetical protein compare
CA264_08120 +0.4 2.4 electron transfer flavoprotein subunit alpha compare
CA264_11820 +0.4 1.1 thioesterase compare
CA264_19715 +0.4 1.9 hypothetical protein compare
CA264_01715 +0.4 1.4 4Fe-4S ferredoxin compare
CA264_00730 +0.4 1.5 hypothetical protein compare
CA264_16175 +0.4 2.1 hypothetical protein compare
CA264_04285 +0.4 1.0 hypothetical protein compare
CA264_17680 +0.4 1.9 CoB--CoM heterodisulfide reductase compare
CA264_00235 +0.4 1.4 hypothetical protein compare
CA264_03255 +0.4 1.7 hypothetical protein compare
CA264_06530 +0.4 1.5 peptidase compare
CA264_02180 +0.4 0.9 response regulator compare
CA264_09710 +0.4 0.5 transcriptional regulator compare
CA264_02985 +0.4 2.3 NAD(P)-dependent oxidoreductase compare
CA264_15000 +0.4 0.6 single-stranded DNA-binding protein compare
CA264_11315 +0.4 1.9 glycerophosphodiester phosphodiesterase compare
CA264_19045 +0.4 1.7 acyl-CoA dehydrogenase compare
CA264_05595 +0.4 1.8 septum formation protein Maf compare
CA264_14970 +0.4 2.2 gliding motility lipoprotein GldB compare
CA264_17830 +0.4 2.1 transcriptional regulator compare
CA264_07365 +0.4 1.4 hypothetical protein compare
CA264_10910 +0.4 2.9 phytoene dehydrogenase compare
CA264_12405 +0.4 2.5 hypothetical protein compare
CA264_02575 +0.4 1.6 potassium transporter KefB compare
CA264_03905 +0.4 1.0 polysaccharide deacetylase family protein compare
CA264_14885 +0.4 1.7 hypothetical protein compare
CA264_17010 +0.4 1.6 helicase SNF2 compare
CA264_21340 +0.4 2.0 hypothetical protein compare
CA264_20020 +0.4 2.3 hypothetical protein compare
CA264_12515 +0.4 1.4 YebC/PmpR family DNA-binding transcriptional regulator compare
CA264_18270 +0.4 0.8 hypothetical protein compare
CA264_13535 +0.4 2.1 AraC family transcriptional regulator compare
CA264_03605 +0.4 0.9 DNA-binding protein compare
CA264_14690 +0.4 3.0 peptidase S41 compare
CA264_20040 +0.4 2.2 hypothetical protein compare
CA264_19195 +0.3 2.7 hypothetical protein compare
CA264_15585 +0.3 1.9 short-chain dehydrogenase compare
CA264_00010 +0.3 1.8 hypothetical protein compare
CA264_08800 +0.3 2.3 kinase inhibitor compare
CA264_00705 +0.3 1.5 hypothetical protein compare
CA264_10290 +0.3 1.2 hypothetical protein compare
CA264_20455 +0.3 1.7 LLM class flavin-dependent oxidoreductase compare
CA264_08500 +0.3 0.9 hypothetical protein compare
CA264_08470 +0.3 2.4 glutamyl-tRNA reductase compare
CA264_10525 +0.3 0.4 molybdenum cofactor biosynthesis protein MoaE compare
CA264_15895 +0.3 2.3 hypothetical protein compare
CA264_04385 +0.3 1.0 hypothetical protein compare
CA264_12455 +0.3 2.5 hypothetical protein compare
CA264_03115 +0.3 1.3 hypothetical protein compare
CA264_10900 +0.3 2.0 hypothetical protein compare
CA264_18260 +0.3 1.2 NADH-quinone oxidoreductase subunit C compare
CA264_06290 +0.3 2.0 amino-acid racemase compare
CA264_10895 +0.3 1.3 hypothetical protein compare
CA264_14110 +0.3 0.9 phosphoribosyltransferase compare
CA264_20760 +0.3 2.2 hypothetical protein compare
CA264_10905 +0.3 2.2 phytoene synthase compare
CA264_12665 +0.3 2.1 phosphatase PAP2 family protein compare
CA264_16590 +0.3 1.1 site-2 protease family protein compare
CA264_11665 +0.3 1.4 DDE transposase compare
CA264_01585 +0.3 1.5 hypothetical protein compare
CA264_18830 +0.3 1.0 hypothetical protein compare
CA264_01655 +0.3 2.0 CoA transferase compare
CA264_03480 +0.3 1.5 hypothetical protein compare
CA264_12240 +0.3 1.6 ABC transporter ATP-binding protein compare
CA264_08095 +0.3 2.1 ABC transporter permease compare
CA264_11620 +0.3 2.6 hypothetical protein compare
CA264_17390 +0.3 1.1 hypothetical protein compare
CA264_18635 +0.3 1.9 phosphoribosylglycinamide formyltransferase compare
CA264_21285 +0.3 1.0 hypothetical protein compare
CA264_07700 +0.3 2.1 hypothetical protein compare
CA264_20560 +0.3 1.5 DNA repair ATPase compare
CA264_21610 +0.3 1.3 hypothetical protein compare
CA264_17745 +0.3 1.5 TetR family transcriptional regulator compare
CA264_01490 +0.3 2.2 DUF4199 domain-containing protein compare
CA264_02255 +0.3 2.0 hypothetical protein compare
CA264_19600 +0.3 1.5 aldehyde dehydrogenase family protein compare
CA264_20460 +0.3 1.5 hypothetical protein compare
CA264_14200 +0.3 0.5 NADH-quinone oxidoreductase subunit A compare
CA264_05620 +0.3 1.7 hypothetical protein compare
CA264_01635 +0.3 1.7 nicotinamidase compare
CA264_15295 +0.3 1.9 SAM-dependent methyltransferase compare
CA264_01155 +0.3 0.9 Zn-dependent protease compare


Specific Phenotypes

None in this experiment

For Pontibacter actiniarum KMM 6156, DSM 19842 in stress experiments

For stress Sodium perchlorate monohydrate across organisms